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New page: left|200px<br /><applet load="2ij9" size="450" color="white" frame="true" align="right" spinBox="true" caption="2ij9, resolution 2.90Å" /> '''Crystal Structure of...
 
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[[Image:2ij9.gif|left|200px]]<br /><applet load="2ij9" size="450" color="white" frame="true" align="right" spinBox="true"
caption="2ij9, resolution 2.90&Aring;" />
'''Crystal Structure of Uridylate Kinase from Archaeoglobus Fulgidus'''<br />


==About this Structure==
==Crystal Structure of Uridylate Kinase from Archaeoglobus Fulgidus==
2IJ9 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Archaeoglobus_fulgidus Archaeoglobus fulgidus] with SO4 as [http://en.wikipedia.org/wiki/ligand ligand]. Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=2IJ9 OCA].  
<StructureSection load='2ij9' size='340' side='right'caption='[[2ij9]], [[Resolution|resolution]] 2.90&Aring;' scene=''>
[[Category: Archaeoglobus fulgidus]]
== Structural highlights ==
[[Category: Single protein]]
<table><tr><td colspan='2'>[[2ij9]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Archaeoglobus_fulgidus_DSM_4304 Archaeoglobus fulgidus DSM 4304]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2IJ9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2IJ9 FirstGlance]. <br>
[[Category: Adams, J.M.]]
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.9&#8491;</td></tr>
[[Category: Almo, S.C.]]
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
[[Category: Burley, S.K.]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ij9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ij9 OCA], [https://pdbe.org/2ij9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ij9 RCSB], [https://www.ebi.ac.uk/pdbsum/2ij9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ij9 ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/2ij9 TOPSAN]</span></td></tr>
[[Category: Chen, R.]]
</table>
[[Category: Dickey, M.]]
== Function ==
[[Category: Keefe, L.J.]]
[https://www.uniprot.org/uniprot/PYRH_ARCFU PYRH_ARCFU] Catalyzes the reversible phosphorylation of UMP to UDP (By similarity).
[[Category: NYSGXRC, New.York.Structural.GenomiX.Research.Consortium.]]
== Evolutionary Conservation ==
[[Category: Ozyurt, S.]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: Patskovsky, Y.]]
Check<jmol>
[[Category: Sauder, J.M.]]
  <jmolCheckbox>
[[Category: Wasserman, S.R.]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ij/2ij9_consurf.spt"</scriptWhenChecked>
[[Category: SO4]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: kinase]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: new york structural genomix research consortium structural genomics]]
  </jmolCheckbox>
[[Category: nysgxrc]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ij9 ConSurf].
[[Category: protein structure initiative]]
<div style="clear:both"></div>
[[Category: psi]]
[[Category: structural genomics]]


''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Wed Nov 21 12:20:39 2007''
==See Also==
*[[Uridylate kinase|Uridylate kinase]]
__TOC__
</StructureSection>
[[Category: Archaeoglobus fulgidus DSM 4304]]
[[Category: Large Structures]]
[[Category: Adams JM]]
[[Category: Almo SC]]
[[Category: Burley SK]]
[[Category: Chen R]]
[[Category: Dickey M]]
[[Category: Keefe LJ]]
[[Category: Ozyurt S]]
[[Category: Patskovsky Y]]
[[Category: Sauder JM]]
[[Category: Wasserman SR]]

Latest revision as of 10:12, 30 August 2023

Crystal Structure of Uridylate Kinase from Archaeoglobus Fulgidus

2ij9, resolution 2.90Å

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