3e5n: Difference between revisions

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{{Seed}}
[[Image:3e5n.jpg|left|200px]]


<!--
==Crystal structure of D-alanine-D-alanine ligase from Xanthomonas oryzae pv. oryzae KACC10331==
The line below this paragraph, containing "STRUCTURE_3e5n", creates the "Structure Box" on the page.
<StructureSection load='3e5n' size='340' side='right'caption='[[3e5n]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3e5n]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Xanthomonas_oryzae_pv._oryzae_MAFF_311018 Xanthomonas oryzae pv. oryzae MAFF 311018]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3E5N OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3E5N FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
-->
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3e5n FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3e5n OCA], [https://pdbe.org/3e5n PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3e5n RCSB], [https://www.ebi.ac.uk/pdbsum/3e5n PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3e5n ProSAT]</span></td></tr>
{{STRUCTURE_3e5n| PDB=3e5n |  SCENE= }}
</table>
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/e5/3e5n_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3e5n ConSurf].
<div style="clear:both"></div>


===Crystal strucutre of D-alanine-D-alanine ligase from Xanthomonas oryzae pv. oryzae KACC10331===
==See Also==
 
*[[D-alanine-D-alanine ligase 3D structures|D-alanine-D-alanine ligase 3D structures]]
 
__TOC__
==About this Structure==
</StructureSection>
3E5N is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Xanthomonas_oryzae_pv._oryzae Xanthomonas oryzae pv. oryzae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3E5N OCA].
[[Category: Large Structures]]
[[Category: Xanthomonas oryzae pv. oryzae]]
[[Category: Xanthomonas oryzae pv. oryzae MAFF 311018]]
[[Category: Ahn, Y J.]]
[[Category: Ahn YJ]]
[[Category: Doan, T N.T.]]
[[Category: Doan TNT]]
[[Category: Kang, L W.]]
[[Category: Kang LW]]
[[Category: Kim, H S.]]
[[Category: Kim HS]]
[[Category: Kim, J G.]]
[[Category: Kim JG]]
[[Category: Kim, J K.]]
[[Category: Kim JK]]
[[Category: Lee, B M.]]
[[Category: Lee BM]]
[[Category: Atp-binding]]
[[Category: Bacterial blight]]
[[Category: Cell shape]]
[[Category: Cell wall biogenesis/degradation]]
[[Category: Cytoplasm]]
[[Category: D-alanine-d-alanine ligase]]
[[Category: Ligase]]
[[Category: Magnesium]]
[[Category: Manganese]]
[[Category: Metal-binding]]
[[Category: Nucleotide-binding]]
[[Category: Peptidoglycan synthesis]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Aug 19 13:30:14 2009''

Latest revision as of 15:18, 1 November 2023

Crystal structure of D-alanine-D-alanine ligase from Xanthomonas oryzae pv. oryzae KACC10331

3e5n, resolution 2.00Å

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