3gsd: Difference between revisions
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==2.05 Angstrom structure of a divalent-cation tolerance protein (CutA) from Yersinia pestis== | |||
<StructureSection load='3gsd' size='340' side='right' caption='[[3gsd]], [[Resolution|resolution]] 2.05Å' scene=''> | |||
== Structural highlights == | |||
<table><tr><td colspan='2'>[[3gsd]] is a 12 chain structure with sequence from [http://en.wikipedia.org/wiki/Yersinia_pestis_co92 Yersinia pestis co92]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GSD OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3GSD FirstGlance]. <br> | |||
</td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=EPE:4-(2-HYDROXYETHYL)-1-PIPERAZINE+ETHANESULFONIC+ACID'>EPE</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene><br> | |||
<tr><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | |||
<tr><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">cutA, y0604, YPO0346, YP_0500 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=214092 Yersinia pestis CO92])</td></tr> | |||
== | <tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3gsd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gsd OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3gsd RCSB], [http://www.ebi.ac.uk/pdbsum/3gsd PDBsum], [http://www.topsan.org/Proteins/CSGID/3gsd TOPSAN]</span></td></tr> | ||
[[3gsd]] is a 12 chain structure with sequence from [http://en.wikipedia.org/wiki/Yersinia_pestis_co92 Yersinia pestis co92]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GSD OCA]. | <table> | ||
== Evolutionary Conservation == | |||
[[Image:Consurf_key_small.gif|200px|right]] | |||
Check<jmol> | |||
<jmolCheckbox> | |||
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gs/3gsd_consurf.spt"</scriptWhenChecked> | |||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | |||
<text>to colour the structure by Evolutionary Conservation</text> | |||
</jmolCheckbox> | |||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf]. | |||
<div style="clear:both"></div> | |||
==See Also== | ==See Also== | ||
*[[CutA1|CutA1]] | *[[CutA1|CutA1]] | ||
__TOC__ | |||
</StructureSection> | |||
[[Category: Yersinia pestis co92]] | [[Category: Yersinia pestis co92]] | ||
[[Category: Anderson, W F.]] | [[Category: Anderson, W F.]] | ||
Revision as of 10:56, 29 September 2014
2.05 Angstrom structure of a divalent-cation tolerance protein (CutA) from Yersinia pestis
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Proteopedia Page Contributors and Editors (what is this?)
Categories:
- Yersinia pestis co92
- Anderson, W F.
- CSGID, Center for Structural Genomics of Infectious Diseases.
- Minasov, G.
- Onopriyenko, O.
- Peterson, S N.
- Savchenko, A.
- Skarina, T.
- Wawrzak, Z.
- Center for structural genomics of infectious disease
- Csgid
- Cuta
- Divalent-cation tolerance protein
- Idp00456
- Metal binding protein
- Metal-binding
- Structural genomic
