3hfr: Difference between revisions
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[[Image: | ==Crystal structure of glutamate racemase from Listeria monocytogenes== | ||
<StructureSection load='3hfr' size='340' side='right' caption='[[3hfr]], [[Resolution|resolution]] 2.30Å' scene=''> | |||
== Structural highlights == | |||
<table><tr><td colspan='2'>[[3hfr]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Listeria_monocytogenes Listeria monocytogenes]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HFR OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3HFR FirstGlance]. <br> | |||
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=6JZ:3,6,9,12,15-PENTAOXAHEPTADECANE'>6JZ</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene></td></tr> | |||
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | |||
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">lmo1237, murI, racE ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1639 Listeria monocytogenes])</td></tr> | |||
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Glutamate_racemase Glutamate racemase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.1.1.3 5.1.1.3] </span></td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3hfr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3hfr OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3hfr RCSB], [http://www.ebi.ac.uk/pdbsum/3hfr PDBsum]</span></td></tr> | |||
</table> | |||
== Evolutionary Conservation == | |||
[[Image:Consurf_key_small.gif|200px|right]] | |||
Check<jmol> | |||
<jmolCheckbox> | |||
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/hf/3hfr_consurf.spt"</scriptWhenChecked> | |||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | |||
<text>to colour the structure by Evolutionary Conservation</text> | |||
</jmolCheckbox> | |||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf]. | |||
<div style="clear:both"></div> | |||
==See Also== | |||
*[[Glutamate racemase|Glutamate racemase]] | |||
__TOC__ | |||
</StructureSection> | |||
[[ | |||
[[Category: Glutamate racemase]] | [[Category: Glutamate racemase]] | ||
[[Category: Listeria monocytogenes]] | [[Category: Listeria monocytogenes]] | ||
[[Category: Anderson, W F | [[Category: Anderson, W F]] | ||
[[Category: | [[Category: Structural genomic]] | ||
[[Category: Chruszcz, M | [[Category: Chruszcz, M]] | ||
[[Category: Cymborowski,M | [[Category: Cymborowski,M]] | ||
[[Category: Klimecka, M M | [[Category: Klimecka, M M]] | ||
[[Category: Majorek, K A | [[Category: Majorek, K A]] | ||
[[Category: Minor, W | [[Category: Minor, W]] | ||
[[Category: Onopriyenko, O | [[Category: Onopriyenko, O]] | ||
[[Category: Otwinowski, Z | [[Category: Otwinowski, Z]] | ||
[[Category: Savchenko, A | [[Category: Savchenko, A]] | ||
[[Category: Skarina, T | [[Category: Skarina, T]] | ||
[[Category: Stam, J | [[Category: Stam, J]] | ||
[[Category: Zimmerman, M D | [[Category: Zimmerman, M D]] | ||
[[Category: Cell shape]] | [[Category: Cell shape]] | ||
[[Category: Cell wall biogenesis/degradation]] | [[Category: Cell wall biogenesis/degradation]] | ||
[[Category: Csgid]] | [[Category: Csgid]] | ||
[[Category: Isomerase]] | [[Category: Isomerase]] | ||
[[Category: Peptidoglycan synthesis]] | [[Category: Peptidoglycan synthesis]] | ||
[[Category: Sad]] | [[Category: Sad]] | ||
Revision as of 09:27, 8 December 2014
Crystal structure of glutamate racemase from Listeria monocytogenes
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