3k1p: Difference between revisions

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<StructureSection load='3k1p' size='340' side='right'caption='[[3k1p]], [[Resolution|resolution]] 3.00&Aring;' scene=''>
<StructureSection load='3k1p' size='340' side='right'caption='[[3k1p]], [[Resolution|resolution]] 3.00&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[3k1p]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Aciad Aciad]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3K1P OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3K1P FirstGlance]. <br>
<table><tr><td colspan='2'>[[3k1p]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Acinetobacter_baylyi_ADP1 Acinetobacter baylyi ADP1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3K1P OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3K1P FirstGlance]. <br>
</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[2f6g|2f6g]], [[2f97|2f97]], [[2h99|2h99]], [[3glb|3glb]], [[3k1m|3k1m]], [[3k1n|3k1n]]</div></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3&#8491;</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">ACIAD1435, benM, benR ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=62977 ACIAD])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3k1p FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3k1p OCA], [https://pdbe.org/3k1p PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3k1p RCSB], [https://www.ebi.ac.uk/pdbsum/3k1p PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3k1p ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3k1p FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3k1p OCA], [https://pdbe.org/3k1p PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3k1p RCSB], [https://www.ebi.ac.uk/pdbsum/3k1p PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3k1p ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[https://www.uniprot.org/uniprot/BENM_ACIAD BENM_ACIAD]] Positive regulator of the ben and cat genes for benzoate degradation. BenM is necessary for ben gene expression but not for expression of the cat genes, which can be regulated by CatM. Binds to the inducers cis,cis-muconate and benzoate.  
[https://www.uniprot.org/uniprot/BENM_ACIAD BENM_ACIAD] Positive regulator of the ben and cat genes for benzoate degradation. BenM is necessary for ben gene expression but not for expression of the cat genes, which can be regulated by CatM. Binds to the inducers cis,cis-muconate and benzoate.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Aciad]]
[[Category: Acinetobacter baylyi ADP1]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Craven, S H]]
[[Category: Craven SH]]
[[Category: Momany, C]]
[[Category: Momany C]]
[[Category: Neidle, E L]]
[[Category: Neidle EL]]
[[Category: Ruangprasert, A]]
[[Category: Ruangprasert A]]
[[Category: Activator]]
[[Category: Aromatic hydrocarbons catabolism]]
[[Category: Dna-binding]]
[[Category: Hth]]
[[Category: Lysr-type transcriptional regulator]]
[[Category: Transcription]]
[[Category: Transcription regulation]]

Latest revision as of 08:07, 6 September 2023

Crystal Structure of full-length BenM E226K mutant

3k1p, resolution 3.00Å

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