5gn5: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
No edit summary
OCA (talk | contribs)
No edit summary
 
Line 3: Line 3:
<StructureSection load='5gn5' size='340' side='right'caption='[[5gn5]], [[Resolution|resolution]] 2.85&Aring;' scene=''>
<StructureSection load='5gn5' size='340' side='right'caption='[[5gn5]], [[Resolution|resolution]] 2.85&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[5gn5]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Trybg Trybg]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5GN5 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5GN5 FirstGlance]. <br>
<table><tr><td colspan='2'>[[5gn5]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Trypanosoma_brucei_gambiense Trypanosoma brucei gambiense]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5GN5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5GN5 FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=6XZ:4-[[4-(4-methoxyphenyl)piperazin-1-yl]methyl]-7,8-bis(oxidanyl)chromen-2-one'>6XZ</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.85&#8491;</td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3wxi|3wxi]], [[5gn6|5gn6]], [[5gn7|5gn7]], [[5gn9|5gn9]]</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=6XZ:4-[[4-(4-methoxyphenyl)piperazin-1-yl]methyl]-7,8-bis(oxidanyl)chromen-2-one'>6XZ</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">gk ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=31285 TRYBG])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5gn5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5gn5 OCA], [https://pdbe.org/5gn5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5gn5 RCSB], [https://www.ebi.ac.uk/pdbsum/5gn5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5gn5 ProSAT]</span></td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Glycerol_kinase Glycerol kinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.1.30 2.7.1.30] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5gn5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5gn5 OCA], [http://pdbe.org/5gn5 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5gn5 RCSB], [http://www.ebi.ac.uk/pdbsum/5gn5 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5gn5 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/D3KVM3_TRYBG D3KVM3_TRYBG]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 26: Line 26:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Glycerol kinase]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Trybg]]
[[Category: Trypanosoma brucei gambiense]]
[[Category: Aoki, T]]
[[Category: Aoki T]]
[[Category: Balogun, E O]]
[[Category: Balogun EO]]
[[Category: Harada, S]]
[[Category: Harada S]]
[[Category: Honma, T]]
[[Category: Honma T]]
[[Category: Inaoka, D K]]
[[Category: Inaoka DK]]
[[Category: Inoue, M]]
[[Category: Inoue M]]
[[Category: Kido, Y]]
[[Category: Kido Y]]
[[Category: Kita, K]]
[[Category: Kita K]]
[[Category: Matsuoka, S]]
[[Category: Matsuoka S]]
[[Category: May, B]]
[[Category: May B]]
[[Category: Michels, P A.M]]
[[Category: Michels PAM]]
[[Category: Moore, A L]]
[[Category: Moore AL]]
[[Category: Sato, T]]
[[Category: Sato T]]
[[Category: Shiba, T]]
[[Category: Shiba T]]
[[Category: Takeshi, N]]
[[Category: Takeshi N]]
[[Category: Tanaka, A]]
[[Category: Tanaka A]]
[[Category: Tsuge, T]]
[[Category: Tsuge T]]
[[Category: Watanabe, Y]]
[[Category: Watanabe Y]]
[[Category: African trypanosome]]
[[Category: Drug]]
[[Category: Inhibitor]]
[[Category: Transferase]]

Latest revision as of 11:36, 2 August 2023

Crystal structure of glycerol kinase from Trypanosoma brucei gambiense complexed with cumarin derivative-17

5gn5, resolution 2.85Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA