3vqf: Difference between revisions

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<StructureSection load='3vqf' size='340' side='right'caption='[[3vqf]], [[Resolution|resolution]] 1.20&Aring;' scene=''>
<StructureSection load='3vqf' size='340' side='right'caption='[[3vqf]], [[Resolution|resolution]] 1.20&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[3vqf]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Lk3_transgenic_mice Lk3 transgenic mice]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VQF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3VQF FirstGlance]. <br>
<table><tr><td colspan='2'>[[3vqf]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VQF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3VQF FirstGlance]. <br>
</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Lnx1 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10090 LK3 transgenic mice])</td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.199&#8491;</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3vqf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3vqf OCA], [https://pdbe.org/3vqf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3vqf RCSB], [https://www.ebi.ac.uk/pdbsum/3vqf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3vqf ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3vqf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3vqf OCA], [https://pdbe.org/3vqf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3vqf RCSB], [https://www.ebi.ac.uk/pdbsum/3vqf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3vqf ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[https://www.uniprot.org/uniprot/LNX1_MOUSE LNX1_MOUSE]] E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of NUMB. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates. Mediates ubiquitination of isoform p66 and isoform p72 of NUMB, but not that of isoform p71 or isoform p65.  Isoform 2 provides an endocytic scaffold for IGSF5/JAM4.  
[https://www.uniprot.org/uniprot/LNX1_MOUSE LNX1_MOUSE] E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of NUMB. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates. Mediates ubiquitination of isoform p66 and isoform p72 of NUMB, but not that of isoform p71 or isoform p65.  Isoform 2 provides an endocytic scaffold for IGSF5/JAM4.


==See Also==
==See Also==
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</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Lk3 transgenic mice]]
[[Category: Mus musculus]]
[[Category: Akiyoshi, Y]]
[[Category: Akiyoshi Y]]
[[Category: Furuse, M]]
[[Category: Furuse M]]
[[Category: Goda, N]]
[[Category: Goda N]]
[[Category: Hamada, D]]
[[Category: Hamada D]]
[[Category: Hiroaki, H]]
[[Category: Hiroaki H]]
[[Category: Nakagawa, A]]
[[Category: Nakagawa A]]
[[Category: Narita, H]]
[[Category: Narita H]]
[[Category: Suzuki, M]]
[[Category: Suzuki M]]
[[Category: Tenno, T]]
[[Category: Tenno T]]
[[Category: Claudin c-terminus]]
[[Category: Pdz domain]]
[[Category: Peptide binding protein]]

Latest revision as of 12:33, 8 November 2023

Crystal Structure Analysis of the PDZ Domain Derived from the Tight Junction Regulating Protein

3vqf, resolution 1.20Å

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