3m1e: Difference between revisions

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<StructureSection load='3m1e' size='340' side='right'caption='[[3m1e]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
<StructureSection load='3m1e' size='340' side='right'caption='[[3m1e]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[3m1e]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Aciad Aciad]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3M1E OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3M1E FirstGlance]. <br>
<table><tr><td colspan='2'>[[3m1e]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Acinetobacter_baylyi_ADP1 Acinetobacter baylyi ADP1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3M1E OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3M1E FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">ACIAD1435, benM, benR ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=62977 ACIAD])</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3m1e FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3m1e OCA], [https://pdbe.org/3m1e PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3m1e RCSB], [https://www.ebi.ac.uk/pdbsum/3m1e PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3m1e ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3m1e FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3m1e OCA], [https://pdbe.org/3m1e PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3m1e RCSB], [https://www.ebi.ac.uk/pdbsum/3m1e PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3m1e ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[https://www.uniprot.org/uniprot/BENM_ACIAD BENM_ACIAD]] Positive regulator of the ben and cat genes for benzoate degradation. BenM is necessary for ben gene expression but not for expression of the cat genes, which can be regulated by CatM. Binds to the inducers cis,cis-muconate and benzoate.  
[https://www.uniprot.org/uniprot/BENM_ACIAD BENM_ACIAD] Positive regulator of the ben and cat genes for benzoate degradation. BenM is necessary for ben gene expression but not for expression of the cat genes, which can be regulated by CatM. Binds to the inducers cis,cis-muconate and benzoate.


==See Also==
==See Also==
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Aciad]]
[[Category: Acinetobacter baylyi ADP1]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Alanazi, A]]
[[Category: Alanazi A]]
[[Category: Momany, C]]
[[Category: Momany C]]
[[Category: Neidle, E L]]
[[Category: Neidle EL]]
[[Category: Activator]]
[[Category: Aromatic hydrocarbons catabolism]]
[[Category: Dna-binding]]
[[Category: Transcription]]
[[Category: Transcription regulation]]
[[Category: Transcription regulator]]
[[Category: Whth]]

Latest revision as of 08:47, 7 February 2024

Crystal Structure of BenM_DBD

3m1e, resolution 1.80Å

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