9vnj: Difference between revisions

Line 1:

~~'''Unreleased structure'''~~

~~The entry~~ 9vnj is ~~ON HOLD until Paper Publication~~

==Crystal structure of the transmembrane domain of trimeric autotransporter adhesin AtaA in complex with the N-terminal domain of TpgA==

~~Authors~~:

== Structural highlights ==

<table><tr><td colspan='2'>[[9vnj]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Acinetobacter_sp._Tol_5 Acinetobacter sp. Tol 5]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=9VNJ OCA]. For a guided tour on the structure components use [https://proteopedia.org/fgij/fg.htm?mol=9VNJ FirstGlance].

~~Description~~:

</td></tr><tr id='method'><td class="sblockLbl">[[Empirical_models|Method:]]</td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.6Å</td></tr>

[[Category: ~~Unreleased~~ Structures]]

<tr id='ligand'><td class="sblockLbl">[[Ligand|Ligands:]]</td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=C8E:(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE'>C8E</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MES:2-(N-MORPHOLINO)-ETHANESULFONIC+ACID'>MES</scene>, <scene name='pdbligand=PGE:TRIETHYLENE+GLYCOL'>PGE</scene></td></tr>

<tr id='resources'><td class="sblockLbl">Resources:</td><td class="sblockDat">[https://proteopedia.org/fgij/fg.htm?mol=9vnj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=9vnj OCA], [https://pdbe.org/9vnj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=9vnj RCSB], [https://www.ebi.ac.uk/pdbsum/9vnj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=9vnj ProSAT]</td></tr>

</table>

== Function ==

[https://www.uniprot.org/uniprot/ATAA_ACIS5 ATAA_ACIS5] Responsible for autoagglutination, and for adhesion to abiotic and biotic surfaces such as polystyrene (PS), type I collagen, polypropylene (PP), polyvinylchloride (PVC), glass and stainless steel (SS). Adhesion is much stronger than that mediated by Yersinia YadA in a comparative assay. Confers autoagglutination and binding to PS, type I collagen, PP, PVC, glass and SS upon expression in Acinetobacter baylyi strain ADP1 (PubMed:23155410). Involved in rapid, irreversible adherence to polyurethane (PubMed:17090933). Forms an unusual biofilm (PubMed:31972092). An extended, surface exposed fiber binds to quartz crystals, PS and glass. It can be removed by washing in distilled water (PubMed:27305955, PubMed:28720107).<ref>PMID:17090933</ref> <ref>PMID:23155410</ref> <ref>PMID:27305955</ref> <ref>PMID:28720107</ref> <ref>PMID:31972092</ref>

== References ==

__TOC__

</StructureSection>

[[Category: Acinetobacter sp. Tol 5]]

[[Category: Large Structures]]

[[Category: Hiroshige R]]

[[Category: Hori K]]

[[Category: Suzuki A]]

[[Category: Yoshimoto S]]

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@@ Line 1: / Line 1: @@
-'''Unreleased structure'''
-The entry 9vnj is ON HOLD  until Paper Publication
+==Crystal structure of the transmembrane domain of trimeric autotransporter adhesin AtaA in complex with the N-terminal domain of TpgA==
+<StructureSection load='9vnj' size='340' side='right'caption='[[9vnj]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
-Authors:
+== Structural highlights ==
+<table><tr><td colspan='2'>[[9vnj]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Acinetobacter_sp._Tol_5 Acinetobacter sp. Tol 5]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=9VNJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=9VNJ FirstGlance]. <br>
-Description:
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.6&#8491;</td></tr>
-[[Category: Unreleased Structures]]
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=C8E:(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE'>C8E</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MES:2-(N-MORPHOLINO)-ETHANESULFONIC+ACID'>MES</scene>, <scene name='pdbligand=PGE:TRIETHYLENE+GLYCOL'>PGE</scene></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=9vnj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=9vnj OCA], [https://pdbe.org/9vnj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=9vnj RCSB], [https://www.ebi.ac.uk/pdbsum/9vnj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=9vnj ProSAT]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/ATAA_ACIS5 ATAA_ACIS5] Responsible for autoagglutination, and for adhesion to abiotic and biotic surfaces such as polystyrene (PS), type I collagen, polypropylene (PP), polyvinylchloride (PVC), glass and stainless steel (SS). Adhesion is much stronger than that mediated by Yersinia YadA in a comparative assay. Confers autoagglutination and binding to PS, type I collagen, PP, PVC, glass and SS upon expression in Acinetobacter baylyi strain ADP1 (PubMed:23155410). Involved in rapid, irreversible adherence to polyurethane (PubMed:17090933). Forms an unusual biofilm (PubMed:31972092). An extended, surface exposed fiber binds to quartz crystals, PS and glass. It can be removed by washing in distilled water (PubMed:27305955, PubMed:28720107).<ref>PMID:17090933</ref> <ref>PMID:23155410</ref> <ref>PMID:27305955</ref> <ref>PMID:28720107</ref> <ref>PMID:31972092</ref>
+== References ==
+<references/>
+__TOC__
+</StructureSection>
+[[Category: Acinetobacter sp. Tol 5]]
+[[Category: Large Structures]]
+[[Category: Hiroshige R]]
+[[Category: Hori K]]
+[[Category: Suzuki A]]
+[[Category: Yoshimoto S]]