9hkf: Difference between revisions
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==X-Ray crystal structure of a photoswitchable HaloTag bound to JF635== | |||
<StructureSection load='9hkf' size='340' side='right'caption='[[9hkf]], [[Resolution|resolution]] 2.40Å' scene=''> | |||
== Structural highlights == | |||
<table><tr><td colspan='2'>[[9hkf]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Rhodococcus_rhodochrous Rhodococcus rhodochrous]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=9HKF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=9HKF FirstGlance]. <br> | |||
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4Å</td></tr> | |||
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PUJ:2-[3-(3-fluoranylazetidin-1-ium-1-ylidene)-7-(3-fluoranylazetidin-1-yl)-5,5-dimethyl-benzo[b][1]benzosilin-10-yl]-4-[2-(2-hexoxyethoxy)ethylcarbamoyl]benzoic+acid'>PUJ</scene></td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=9hkf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=9hkf OCA], [https://pdbe.org/9hkf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=9hkf RCSB], [https://www.ebi.ac.uk/pdbsum/9hkf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=9hkf ProSAT]</span></td></tr> | |||
</table> | |||
== Function == | |||
[https://www.uniprot.org/uniprot/A0A453KFI0_AEGTS A0A453KFI0_AEGTS] [https://www.uniprot.org/uniprot/DHAA_RHORH DHAA_RHORH] Catalyzes hydrolytic cleavage of carbon-halogen bonds in halogenated aliphatic compounds, leading to the formation of the corresponding primary alcohols, halide ions and protons. Expresses halogenase activity against 1-chloroalkanes of chain length C3 to C10, and also shows a very weak activity with 1,2-dichloroethane. | |||
<div style="background-color:#fffaf0;"> | |||
== Publication Abstract from PubMed == | |||
Photosensitive fluorophores, whose emission can be controlled using light, are essential for advanced biological imaging, enabling precise spatiotemporal tracking of molecular features and facilitating super-resolution microscopy techniques. Although irreversibly photoactivatable fluorophores are well established, reversible reporters that can be reactivated multiple times remain scarce, and only a few have been applied in living cells using generalizable protein labeling methods. To address these limitations, we introduce chemigenetic photoswitchable fluorophores, leveraging the self-labeling HaloTag protein with fluorogenic rhodamine dye ligands. By incorporating a light-responsive protein domain into HaloTag, we engineer a tunable, photoswitchable HaloTag (psHaloTag), which can reversibly modulate the fluorescence of a bound dye-ligand via a light-induced conformational change. Our best performing psHaloTag variants show excellent performance in living cells, with large, reversible, deep-red fluorescence turn-on upon 450 nm illumination across various biomolecular targets and SMLM compatibility. Together, this work establishes the chemigenetic approach as a versatile platform for the design of photoswitchable reporters, tunable through both genetic and synthetic modifications, with promising applications for dynamic imaging. | |||
A Photoswitchable HaloTag for Spatiotemporal Control of Fluorescence in Living Cells.,Walterspiel F, Ugarte-Uribe B, Weidenhausen J, Vincent M, Narayanasamy KK, Dimitriadi A, Khan AUM, Fritsch M, Muller CW, Zimmermann T, Deo C Angew Chem Int Ed Engl. 2025 Oct 23:e202424955. doi: 10.1002/anie.202424955. PMID:41131894<ref>PMID:41131894</ref> | |||
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |||
[[Category: | </div> | ||
<div class="pdbe-citations 9hkf" style="background-color:#fffaf0;"></div> | |||
== References == | |||
<references/> | |||
__TOC__ | |||
</StructureSection> | |||
[[Category: Large Structures]] | |||
[[Category: Rhodococcus rhodochrous]] | |||
[[Category: Deo C]] | |||
[[Category: Mueller CW]] | |||
[[Category: Ugarte-Uribe B]] | |||
[[Category: Walterspiel F]] | |||
[[Category: Weidenhausen J]] | |||
Revision as of 09:30, 6 November 2025
X-Ray crystal structure of a photoswitchable HaloTag bound to JF635
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