6yso: Difference between revisions

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<StructureSection load='6yso' size='340' side='right'caption='[[6yso]], [[Resolution|resolution]] 3.13&Aring;' scene=''>
<StructureSection load='6yso' size='340' side='right'caption='[[6yso]], [[Resolution|resolution]] 3.13&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[6yso]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Oryctolagus_cuniculus Oryctolagus cuniculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6YSO OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6YSO FirstGlance]. <br>
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6YSO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6YSO FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=128:SPIRO(2,4,6-TRINITROBENZENE[1,2A]-2O,3O-METHYLENE-ADENINE-TRIPHOSPHATE'>128</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=TG1:OCTANOIC+ACID+[3S-[3ALPHA,+3ABETA,+4ALPHA,+6BETA,+6ABETA,+7BETA,+8ALPHA(Z),+9BALPHA]]-6-(ACETYLOXY)-2,3,-3A,4,5,6,6A,7,8,9B-DECAHYDRO-3,3A-DIHYDROXY-3,6,9-TRIMETHYL-8-[(2-METHYL-1-OXO-2-BUTENYL)OX+Y]-2-OXO-4-(1-OXOBUTOXY)-AZULENO[4,5-B]FURAN-7-YL+ESTER'>TG1</scene>, <scene name='pdbligand=VN4:OXIDO(DIOXO)VANADIUM'>VN4</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.13&#8491;</td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/P-type_Ca(2+)_transporter P-type Ca(2+) transporter], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=7.2.2.10 7.2.2.10] </span></td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=128:SPIRO(2,4,6-TRINITROBENZENE[1,2A]-2O,3O-METHYLENE-ADENINE-TRIPHOSPHATE'>128</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=TG1:OCTANOIC+ACID+[3S-[3ALPHA,+3ABETA,+4ALPHA,+6BETA,+6ABETA,+7BETA,+8ALPHA(Z),+9BALPHA]]-6-(ACETYLOXY)-2,3,-3A,4,5,6,6A,7,8,9B-DECAHYDRO-3,3A-DIHYDROXY-3,6,9-TRIMETHYL-8-[(2-METHYL-1-OXO-2-BUTENYL)OX+Y]-2-OXO-4-(1-OXOBUTOXY)-AZULENO[4,5-B]FURAN-7-YL+ESTER'>TG1</scene>, <scene name='pdbligand=VN4:OXIDO(DIOXO)VANADIUM'>VN4</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6yso FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6yso OCA], [http://pdbe.org/6yso PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6yso RCSB], [http://www.ebi.ac.uk/pdbsum/6yso PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6yso ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6yso FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6yso OCA], [https://pdbe.org/6yso PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6yso RCSB], [https://www.ebi.ac.uk/pdbsum/6yso PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6yso ProSAT]</span></td></tr>
</table>
</table>
== Function ==
 
[[http://www.uniprot.org/uniprot/AT2A1_RABIT AT2A1_RABIT]] This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol to the sarcoplasmic reticulum lumen. Contributes to calcium sequestration involved in muscular excitation/contraction (By similarity).
==See Also==
*[[ATPase 3D structures|ATPase 3D structures]]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Oryctolagus cuniculus]]
[[Category: Beis K]]
[[Category: Beis, K]]
[[Category: Bountra K]]
[[Category: Bountra, K]]
[[Category: Bublitz M]]
[[Category: Bublitz, M]]
[[Category: Duman R]]
[[Category: Duman, R]]
[[Category: El Omari K]]
[[Category: Kwong, H]]
[[Category: Kwong H]]
[[Category: Mohamad, N]]
[[Category: Mohamad N]]
[[Category: Moller, J V]]
[[Category: Moller JV]]
[[Category: Mykhaylyk, V]]
[[Category: Mykhaylyk V]]
[[Category: Olesen, C E]]
[[Category: Olesen CE]]
[[Category: Omari, K El]]
[[Category: Romano M]]
[[Category: Romano, M]]
[[Category: Schlegel K]]
[[Category: Schlegel, K]]
[[Category: Wagner A]]
[[Category: Wagner, A]]
[[Category: Hydrolase]]
[[Category: P-type atpase]]
[[Category: Sad phasing]]
[[Category: Vanadate]]

Latest revision as of 09:43, 15 April 2026

Crystal structure of the (SR) Ca2+-ATPase solved by vanadium SAD phasing

6yso, resolution 3.13Å

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