Synaptotagmin 3D structures

3D structures of synaptotagmin

Updated on 12-February-2020

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• Synaptotagmin-1; domains: toxin-binding 33-53; C2A 141-268; C2B 267-446
  • 3f00, 3f01, 3f04, 3f05 – hSYT1 C2A domain – human
    
  • 2k45 – hSYT1 C2A domain - NMR
    
  • 2r83 – hSYT1 C2A+C2B domains
    
  • 5t0r, 5vfe – mSYT1 C2A domain – mouse
    
  • 5vff, 5vfg, 5t0s – mSYT1 C2B domain
    
  • 1rsy, 4wee – rSYT1 C2A domain – rat
    
  • 1k5w, 1byn – rSYT1 C2A domain - NMR
    
  • 1tjx, 1tjm, 1uov, 1uow – rSYT1 C2B domain
    
  • 5ccj – rSYT1 C2B domain (mutant)
    
• Synaptotagmin-1 complex
  • 2lha – hSYT1 C2B domain + inositol hexaphosphate - NMR
    
  • 4v11 – hSYT1 C2B domain + synaptic vesicle glycoprotein peptide
    
  • 2k4a – hSYT1 C2A domain + heparin-binding growth factor - NMR
    
  • 2ki6 – hSYT1 C2A domain + heparin-binding growth factor + protein S100 A13
    
  • 4isq – hSYT1 toxin-binding domain + botulinum neurotoxin DC heavy chain
    
  • 2n1t – hSYT1 C2B domain + VAMP-2 + syntaxin-1A + SNAP-25
    
  • 2yoa – rSYT1 C2B domain + phosphoserine
    
  • 5w5d, 5w5c – rSYT1 C2B domain + VAMP-2 + syntaxin-1A + SNAP-25 + complexin-1
    
  • 5cch, 5ccg, 5kj7, 5cci, 5kj8 – rSYT1 C2A+C2B domains + VAMP-2 + syntaxin-1A + SNAP-25
    
  • 6mti – rSYT1 C2A+C2B domains + VAMP-2 + syntaxin-1A + SNAP-25 – Cryo EM
    
• Synaptotagmin-2
  • 4npk, 4npj – hSYT2 C2A+C2B domains 363-662
    
  • 4p42 – hSYT2 SMP+C2A+C2B domains 191-662
    
  • 2np0, 4kbb – mSYT2 ectodomain 1-60 + botulinum neurotoxin B
    
  • 4isr – rSYT2 toxin-binding domain + botulinum neurotoxin DC heavy chain
    
  • 2nm1 – rSYT2 toxin-binding domain + botulinum neurotoxin B receptor-binding domain
    
• Synaptotagmin-3
  • 3hn8 – rSYT3 C2A+C2B domains 293-588
    
  • 1dqv – rSYT3 C2A+C2B domains - NMR
    
• Synaptotagmin-4
  • 1ugk – hSYT4 C2A domain - NMR
    
  • 1w15, 1w16 – rSYT4 C2B domain
    
• Synaptotagmin-5
  • 5h4y – hSYT5 C2A domain
    
  • 5h4z – hSYT5 C2A domain (mutant)
    
• Synaptotagmin-7
  • 2d8k – hSYT7 C2A domain - NMR
    
  • 6anj – rSYT7 C2A domain
    
  • 6ank – rSYT7 C2A+C2B domains
    
  • 3n5a – mSYT7 C2B domain 266-403
    
• Synaptotagmin-13
  • 1wfm – hSYT13 C2A domain - NMR
    

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Michal Harel, Joel L. Sussman