Spectrin

spinqualitylabelsall models Human spectrinα (grey) and β1 chain (green) 3lbx Show:Asymmetric Unit Biological Assembly Drag the structure with the mouse to rotate   Export Animated Image   Print3D Function Spectrin forms scaffolding in plasma membranes and cytoskeletal structure. It interacts with actin at either end of its tetramer. The SPT dimer is formed by association of α1 and β1 monomers. In invertebrates there are SPT α, β and βH. In vertebrates there are SPT α1 (SPTA1), α2 (SPTA2) and β1 (SPTB1) to β5. SPT contains an SRC Homology 3 domain (SH3), a Pleckstrin Homology (PH) domain and a Calponin Homology (CH) domain. Disease Mutations in SPT α are found in patients with hereditary elliptocytosis. SPT β deficiency is found in hereditary spherocytosis. 3D Structures of Spectrin Spectrin 3D structures

3D Structures of Spectrin

Updated on 07-April-2022

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• Spectrin α1; Domains – N-terminal tetramerization 1-156; SH3 969-1025; C-terminal tetramerization 1902-2084
  • Spectrin 3D structures – hSPT a chain N-terminal tetramerization domain +hSPT b chain C-terminal tetramerization domain – human
    
  • 2rot, 2oaw, 2nuz, 1u06 - cSPT a chain SH3 domain – chicken
    
  • 2jm8, 2jm9, 2cdt, 2f2v, 2f2w, 2f2x, 3i9q - cSPT a chain SH3 domain (mutant)
    
  • 2rmo, 1neg, 1m8m - cSPT a chain SH3 domain – NMR
    
  • 2jma, 2jmc - cSPT a chain SH3 domain (mutant)+P41 peptide
    
• Spectrin α2
  • 3f31 – hSPT a2 chain N-terminal tetramerization domain
    
  • 5fwc, 5fwb - hSPT a2 chain SH3 domain (mutant)
    
  • 3fb2 – hSPT a2 chain repeats 15-16 1337-1544
    
  • 5fw9, 5fwb, 5fwc, 5ihi, 5ihk, 5ihn – hSPT a2 chain SH3 domain (mutant)
    
  • 2fot - SPT a2 chain calmodulin-binding domain 1172-1211 +calmodulin – bovine
    
  • 3thk - SPT a2 chain SH3 domain + polypeptide - rat
  • 1qkw – cSPT a2 chain SH3 domain (mutant)
    
• Spectrin α
  • 1owa - hSPT a chain N-terminal tetramerization domain – NMR
    
  • 5j4o - hSPT a chain repeats 16-17 1599-1826
    
  • 2kr3, 4f17, 4f16 - cSPT a chain SH3 domain
    
  • 1e6g, 1e6h, 1hd3, 1qkx, 1pwt, 1bk2, 1shg, 1h8k, 3ngp, 3m0p, 3m0q, 3m0r, 3m0s, 3m0t, 3m0u - cSPT a chain SH3 domain (mutant)
    
  • 1uue, 1e7o, 1g2b, 1aey, 1tuc, 1tud - cSPT a chain SH3 domain (mutant) – NMR
    
  • 2lj3, 6scw - cSPT a chain SH3 domain – NMR
    
  • 1u4q – cSPT a chain repeats 15-17 1662-1982
    
  • 1u5p - cSPT a chain repeats 15-16 1662-1876
    
  • 1cun - cSPT a chain repeats 16-17 (mutant) 1771-1982
    
  • 1aj3 - cSPT a chain repeat 16 1772-1869 - NMR
    
  • 6ro9 – SPT SH3 domain – sunfish
    
• Spectrin β1
  • 3kbt, 3kbu - hSPT β1 chain repeats 13-15 1583-1906 +ankyrin
    
  • 3f57, 3edu - hSPT β1 chain repeats 14-15 1686-1906
    
  • 1s35 – hSPT β1 chain repeats 8-9 1063-1275 (mutant)
• Spectrin β2
  • 3edv – hSPT β2 chain repeats 14-16 1697-2015
• Spectrin β3
  • 1wyq – hSPT β3 chain 2nd CH domain – NMR
    
  • 1wjm – hSPT β3 chain PH domain 2199-2328 – NMR
    
  • 6anu - hSPT β3 chain actin binding domain 1-284 + actin - Cryo EM
    
• Spectrin β4
  • 6m3r – mSPT b chain 1616-1937 + Ankyrin-3
    
  • 6m3q – mSPT b chain + Ankyrin-2
    
• Spectrin β
  • 1bkr, 1aa2 – hSPT β chain 2nd CH domain 178-291
    
  • 1dro, 1mph - mSPT β chain PH domain 2199-2304 – NMR – mouse
    
  • 1btn – mSPT β chain PH domain + inositol phosphate
    
  • 6m3p – mSPT β 2 chain 1591-1910 + Ankyrin-3
    
  • 2spc – SPT fragment 1391-1497 - Drosophila melanogaster
• Spectrin R16
  • 5m6s – SPT - Escherichia coli
    

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Alexander Berchansky, Michal Harel