Beta-glucosidase 3D structures

3D structures of Beta-glucosidase

Updated on 02-December-2024

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• Beta glucosidase
  • 2jfe, 3gxd, 3gxi, 3gxm - hGB cystolic – human
    
  • 3ke0, 3keh - hGB (mutant)
    
  • 3ahz – tGB – termite
    
  • 5cg0 – GB – fall armyworm
    
  • 5nbs – GB – Neurospora crassa
    
  • 3gno - JrGB residues 38-521 – Japanese rice
    
  • 2rgl, 2rgm - JrGB residues 29-504
    
  • 3f4v, 3f5j, 3f5k, 3f5l, 3scn, 3sco, 3sct, 3scu, 3scv, 3scw, 3scp, 3scr, 4qll - JrGB 7 (mutant)
    
  • 7d6a – JrGB 18
    
  • 2dga - wGB residues 1-520 – wheat
    
  • 1hxj, 1e1e– ZmGB – Zea mays
    
  • 1e4l - ZmGB (mutant)
    
  • 1cbg – GB cyanogenic – White clover
    
  • 3aiu - rGB residues 50-568 – rye
    
  • 3ptk – rGB – rice
    
  • 7f3a, 7z1i – GB – Arabidopsis thaliana
    
  • 5bwf – ThGB – Trichoderma harzianum
    
  • 6efu – ThGB (mutant)
    
  • 5bvu, 8xpc, 8xpd, 8xpe – TxGB – Thermoanaerobacterium xylanolyticum<br />
  • 8i5o, 8i5r – TxGB (mutant)
    
  • 4mdo – HgGB – Humicola grisea
    
  • 3wh5, 3u48, 3u4a, 5ns6, 5wka, 8j3m, 8j5l – MeGB – Metagenome
    
  • 5ayi, 5ayb, 5ns7, 8j5m – MeGB (mutant)
    
  • 5ju6 – GB – Talaromyces emersonii
    
  • 3ahx – GB – Clostridium cellulovorans
    
  • 7ms2 – GB – Clostridium thermocellum
    
  • 3ahy – TrGB – Trichoderma reesei
    
  • 3abz – KmGB – Kluyveromyces marxianus
    
  • 2x40 – TnGB3B – Thermotoga neapolitana
    
  • 4hz6, 6ier, 6jfp, 7bbs – ubGB 15 – uncultured bacterium
  • 3cmj - ubGB catalytic domain (mutant)
  • 2o9p, 1bga – PpGB – Paenibacillus polymyxa
    
  • 8j9f – GB – Paenibacillus relictisesami
    
  • 2e3z – PcGB – Phanerochaete crysosporium<br />
  • 2vff, 1vff – GB – Pyrococcus horikoshii
    
  • 1oif, 1od0 – TmGB catalytic domain - Thermotoga maritima
    
  • 4gxp – TmGB/TrGB
    
  • 1ug6 – TtGB - Thermus thermophilus
    
  • 4bce – TtGB (mutant)
    
  • 1gon – SsGB – Streptomyces sp.
    
  • 7pjj – GB – Streptomyces scabiel
    
  • 1qox – GB - Bacillus circulans
    
  • 1tr1 - BpGB (mutant) - Bacillus polymyxa
    
  • 3ut0, 3usz – PsGB residues 28-840 – Pseudoalteromonas
    
  • 3f95 – PsGB residues 657-840
    
  • 3apg – PfGB – Pyrococcus furiosus
    
  • 3wq8, 3wdp – PfGB (mutant)
    
  • 3ta9 – GB – Halothermothrix orenii
    
  • 3zyz, 3zz1 – GB – Hypocrea jecorina
    
  • 4iib – AaGB – Aspergillus aculeatus
    
  • 5fji – GB – Aspergillus fumigatus
    
  • 5fjj – GB – Aspergillus oryzae
    
  • 5dt7, 5dt5 – GB – Exiguobacterium antarcticum
    
  • 6wiu – GB – Exiguobacterium marinum
    
  • 7e5j, 8wft, 8wfu, 8wfv, 9k72, 9k73 – GB – Thermoaerobacterium saccharolyticum
    
  • 7dks – TxGB (mutant) – Thermoaerobacterium xylanolyticum
    
  • 6m6m – KfGB (mutant) – Kribbella flavida
    
  • 6ziv – GB – Alicyclobacillus tengchongensis
    
  • 6yn7 – GB – Alicyclobacillus herbarius
    
  • 5ogz - GB – Ruminilostridium thermocellum
    
  • 5wvp, 5wug - GB – Paenibacillus barengoltzii
    
  • 5xxl - BtGB – Bacteroides thetaiotamicron
    
  • 6jxg - GB – Chaetomella raphigera
    
  • 6r5i - PaGB – Pseudomonas aeruginosa
    
  • 6rjk - AtGB – Agrobacterium tumefaciens
    
  • 9gci - CsGB – Caldicellulosinruptor saccharolyticus
    
  • 8ht0 - GB – Caldibacillus thermoamylovorans
    
  • 8in1 - GB – Aplysia kurodai
    
  • 8kap – GB – Strerptomyces griseus
    
  • 8puo - GB – Marinomonas
    
  • 8idz – GB – Prevotella copri
    
• Beta-glucosidase complex with glucose
  • 3wba, 3wbe – rGB (mutant) + glucose
    
  • 4hz8 - ubGB (mutant) + glucose
    
  • 3vij – NkGB (mutant) + glucose
    
  • 4i3g – GB + glucose – Streptomyces venezuelae
    
  • 5jp0 – GB + glucose – Bacterioides ovatus
    
  • 5bx5 – TxGB + glucose
    
  • 4mdp – HgGB + glucose
    
  • 3wh6, 7wdn, 7wdo, 7wdp, 7wdr, 7wds – MeGB + glucose
    
  • 7wdv – MeGB (mutant) + glucose
    
  • 6r5o – PaGB + glucose
    
  • 6r5p – PaGB (mutant) + glucose
    
  • 6rjm – AtGB + glucose
    
  • 6sz6 – GB + glucose – Chaetonium thermophilum
    
  • 8ivy – GB (mutant) + glucose – Acetivibrio thermocellus
    
  • 9gcj – CsGB + glucose
    
• Beta-glucosidase complex with other sugars
  • 3gfx – hGB + drug
    
  • 3vkk – hGB + mannose
    
  • 2zox, 2e9l, 2e9m - hGB cystolic + glucoside
    
  • 3ai0 – tGB + glucoside
    
  • 3ptm, 3ptq – rGB + glucoside
    
  • 3aiv - rGB residues 50-568 + aglycone
    
  • 3aiw - rGB residues 50-568 + glucoside + dinitrophenol
    
  • 3gnp, 3gnr - JrGB residues 38-521 + glucoside
    
  • 3aht, 3ahv, 3scq, 3scs, 4qlk, 4qlj – JrGB7 (mutant) + saccharide
    
  • 7bzm – JrGB 7 + glucoimidazole
    
  • 7d6b – JrGB 18 + gluconolactone
    
  • 6m6l – KfGB + notoginsenoside
    
  • 3air – wGB residues 50-569 + glucoside + dinitrophenol
    
  • 3ais - wGB residues 50-569 (mutant) + glucoside + aglycone
    
  • 3aiq - wGB residues 50-569 + aglycone
    
  • 1v08 – ZmGB + gluco-tetrazole
    
  • 1e1f - ZmGB + glucoside
    
  • 1h49, 1e4n, 1e56 - ZmGB (mutant) + aglycone
    
  • 1oin - TmGBA + glucoside
    
  • 5oss – TmGBA + gluco-imidazole
    
  • 4hz7, 4hz8 - ubGB residues 18-482 (mutant) + glucoside
    
  • 2o9s, 2o9r, 2z1s – PpGB + saccharide
    
  • 2o9t - PpGB + glucoside
    
  • 1uyq - PpGB (mutant) + glucoside
    
  • 1bgg - PpGB + gluconate
    
  • 2jie - BpGB + glucoside
    
  • 1e4i - BpGB (mutant) + glucoside
    
  • 2e40 – PcGB + gluconolactone
    
  • 5xxm - BtGB + gluconolactone
    
  • 5xxo - BtGB + sophorotrise
    
  • 5xxn - BtGB (mutant) + sophorose
    
  • 3vif - NkGB + gluconolactone – Neotermes koshunensis
    
  • 3vig, 3vii - NkGB + saccharide
    
  • 3vih – NkGB + glycerol
    
  • 3vik, 3vil, 3vim, 3vin, 3vio, 3vip – NkGB (mutant) + saccharide
    
  • 1gnx - SsGB + saccharide - Sulfolobus solfataricus
    
  • 4iic, 4iid, 4iie, 4iif – AaGB + drug
    
  • 4iig, 4iih – AaGB + saccharide
    
  • 5bx4 – TxGB + glucoimidazole
    
  • 5bx2 – TxGB + fluoroglucoside
    
  • 3wh7 – MeGB + fucose
    
  • 3wh8 – MeGB + isofagomine
    
  • 3ac0 - KmGB + glucoside
    
  • 2x41, 2x42 - TnGB + glucoside
    
  • 6r5r, 6r5u, 6r5v – PaGB (mutant) + glucoside
    
  • 6r5t – PaGB (mutant) + lactose
    
  • 6rjo – AtGB (mutant) + salicin
    
  • 6rk2 – AtGB (mutant) + pyrnose derivative
    
  • 7dkt, 7dkw – TxGB (mutant) + glucosyl derivative
    
  • 7dku, 7dkx, 8i5p, 8i5t – TxGB (mutant) + cellobiose
    
  • 7dkv, 7dky – TxGB (mutant) + cellotriose
    
  • 8i5q, 8i5u – TxGB (mutant) + laminaribiose
    
• Beta-glucosidase complex with inhibitor
  • 3rik, 3ril - hGB + inhibitor
    
  • 1y7v - hGB (mutant) + inhibitor
    
  • 1e55 - ZmGB (mutant) + inhibitor
    
  • 2wbg, 2wc3, 2wc4, 2vrj, 2jal, 2j75, 2j77, 2j78, 2j79, 2j7b, 2j7d, 2j7e, 2j7f, 2j7g, 2j7h, 2j7c, 2ces, 2cet, 2cbu, 2cbv, 1uz1, 1w3j, 1oim, 5n6t, 5n6s – TmGBA + inhibitor
    
  • 2cer – SsGB + inhibitor
    
  • 5bx3 - TxGB + inhibitor
    
  • 5ns8 - MeGB (mutant) + inhibitor
    
  • 6qwi, 6r4k - PpGB + inhibitor
    
  • 6r5n - PaGB + inhibitor
    
• 6-phospho--glucosidase
  • 3eqn – WfPGB – White-rot fungus
    
  • 3eqo – WfPGB + glucolactone
    
  • 1h4p – PGB I/II – yeast
    
  • 1s6y – PGB – Geobacillus stearothermophilus
    
  • 1up4 – TmPGB
    
  • 1up6, 1up7 – TmPGB + NAD + G6P
    
  • 3qom, 4gze – PGB – Lactobacillus plantarum
    
  • 2xhy – PGB – Escherichia coli
    
  • 6wgd – PGB – Bacillus licheniformis
    
  • 4b3k, 4b3l – SpyPGB – Streptococcus pyogenes
    
  • 5foo – SpyPGB + inhibitor
    
  • 4gpn – PGB + gentiobiose 6-phosphate – Streptococcus mutans
    
  • 4ipl – SpPGB – Streptococcus pneumoniae
    
  • 4ipn – SpPGB + thiocellobiose
    
  • 8ysv – PGB – Enterococcus faecalis
    
• Glucan 1,3--glucosidase see Glucanase
• Raucaffricine-β-glucosidase
  • 3u57, 3u5u – dpRGB (mutant) – devilpepper
    
  • 3u5y – dpRGB (mutant) + secologanin
    
  • 4a3y, 4atd – seRGB – serpentwood
    
  • 4atl – seRGB + glucose
    
  • 4ek7 – seRGB (mutant)
    
  • 3zj6 – seRGB + inhibitor
    
• Strictosidine-β-glucosidase
  • 3zj7, 3zj8 – seSGB + inhibitor
    
  • 2jf7 - seSGB
    
  • 2jf6 – seSGB + strictosidine
    

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Michal Harel