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1qqe

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1qqe, resolution 2.90Å ()

Structural annotation:
Resources:	CATH : 1Qqea00 InterPro : Ipr006162, Ipr000744 Pfam : PF02071 SCOP : d1qqea_ UniProt : P32602

Functional annotation:
Cellular component:	peripheral to membrane of membrane fraction Golgi apparatus membrane endoplasmic reticulum
Biological process:	intracellular protein transport ER to Golgi vesicle-mediated transport vacuole fusion, non-autophagic protein transport transport
Molecular function:	protein binding soluble NSF attachment protein activity

Evolutionary conservation:

Toggle Conservation Colors:	Rows = identical sequences:
Further Information:	Caveats, Explanation, Complete Results at ConSurfDB

Resources:

FirstGlance, OCA, RCSB, PDBsum

Coordinates:

save as pdb, mmCIF, xml

CRYSTAL STRUCTURE OF THE VESICULAR TRANSPORT PROTEIN SEC17

Publication Abstract from PubMed

SNAP proteins play an essential role in membrane trafficking in eukaryotic cells. They activate and recycle SNARE proteins by serving as adaptors between SNAREs and the cytosolic chaperone NSF. We have determined the crystal structure of Sec17, the yeast homolog of alpha-SNAP, to 2.9 A resolution. Sec17 is composed of an N-terminal twisted sheet of alpha-helical hairpins and a C-terminal alpha-helical bundle. The N-terminal sheet has local similarity to the tetratricopeptide repeats from protein phosphatase 5 but has a different overall twist. Sec17 also shares structural features with HEAT and clathrin heavy chain repeats. Possible models of SNAP:SNARE binding suggest that SNAPs may function as lever arms, transmitting forces generated by conformational changes in NSF/Sec18 to drive disassembly of SNARE complexes.

Crystal structure of the vesicular transport protein Sec17: implications for SNAP function in SNARE complex disassembly., Rice LM, Brunger AT, Mol Cell. 1999 Jul;4(1):85-95. PMID:10445030

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

About this Structure

1qqe is a 1 chain structure with sequence from Saccharomyces cerevisiae. Full crystallographic information is available from OCA.

Reference

Rice LM, Brunger AT. Crystal structure of the vesicular transport protein Sec17: implications for SNAP function in SNARE complex disassembly. Mol Cell. 1999 Jul;4(1):85-95. PMID:10445030
Zhang R, Minh T, Lezondra L, Korolev S, Moy SF, Collart F, Joachimiak A. 1.6 A crystal structure of YteR protein from Bacillus subtilis, a predicted lyase. Proteins. 2005 Aug 15;60(3):561-5. PMID:15906318 doi:10.1002/prot.20410