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4dx1

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4dx1, resolution 2.85Å ()
Ligands: ,
Gene: TRPV4, VRL2, VROAC (Homo sapiens)
Related: 4dx2


Resources: FirstGlance, OCA, RCSB, PDBsum
Coordinates: save as pdb, mmCIF, xml



Crystal structure of the human TRPV4 ankyrin repeat domain

Publication Abstract from PubMed

The TRPV4 calcium-permeable cation channel plays important physiological roles in osmosensation, mechanosensation, cell barrier formation, and bone homeostasis. Recent studies reported that mutations in TRPV4, including some in its ankyrin repeat domain (ARD), are associated with human inherited diseases including neuropathies and skeletal dysplasias, probably due to increased constitutive activity of the channel. TRPV4 activity is regulated by the binding of calmodulin and small molecules such as ATP to the ARD in its cytoplasmic N-terminus. We determined structures of ATP-free and -bound forms of human TRPV4-ARD and compared them with available TRPV-ARD structures. The third inter-repeat loop region (Finger 3 loop) is flexible and may act as a switch to regulate the channel activity. Comparisons of TRPV-ARD structures also suggest an evolutionary link between ARD structure and ATP binding ability. Thermal stability analyses and molecular dynamics (MD) simulations suggest that ATP increases stability in TRPV-ARDs that can bind ATP. Biochemical analyses of a large panel of TRPV4-ARD mutations associated with human inherited diseases showed that some impaired thermal stability while others reduced ATP binding ability, suggesting molecular mechanisms for the diseases.

Structural and biochemical consequences of disease-causing mutations in the ankyrin repeat domain of the human TRPV4 channel., Inada H, Procko E, Sotomayor M, Gaudet R, Biochemistry. 2012 Jun 15. PMID:22702953

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

About this Structure

4dx1 is a 2 chain structure with sequence from Homo sapiens. Full crystallographic information is available from OCA.

Reference

  • Inada H, Procko E, Sotomayor M, Gaudet R. Structural and biochemical consequences of disease-causing mutations in the ankyrin repeat domain of the human TRPV4 channel. Biochemistry. 2012 Jun 15. PMID:22702953 doi:10.1021/bi300279b

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