4i3f

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Crystal structure of serine hydrolase CCSP0084 from the polyaromatic hydrocarbon (PAH)-degrading bacterium Cycloclasticus zankles

Structural highlights

4i3f is a 1 chain structure with sequence from Cycloclasticus sp. P1. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.69Å
Ligands:CL, NA, PEG
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

K0C6T6_CYCSP

Publication Abstract from PubMed

Several members of C-C meta-cleavage product (MCP) hydrolases family demonstrate an unusual ability to hydrolyze esters as well as the MCPs (including those from mono- and bicyclic aromatics). While the molecular mechanisms responsible for such substrate promiscuity are starting to emerge the full understanding of these complex enzymes is far from complete. Herein, we describe six distinct alpha/beta hydrolases identified through genomic approaches, four of which demonstrate the unprecedented characteristic of activity towards a broad spectrum of substrates including p-nitrophenyl, halogenated, fatty acyl, aryl, glycerol, cinnamoyl and carbohydrate esters, lactones, 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate and 2-hydroxy-6-oxohepta-2,4-dienoate. Using structural analysis and site-directed mutagenesis we have identified the three residues (S32, V130 and W144) determining the unusual substrate specificity of one of these proteins, CCSP0084. The results may open up new research avenues into comparative catalytic models, structural and mechanistic studies, and biotechnological applications of MCP hydrolases.

Single residues dictate the co-evolution of dual esterases - MCP hydrolases from the alpha/beta hydrolase family.,Alcaide M, Tornes J, Stogios PJ, Xu X, Gertler C, Di Leo R, Bargiela R, Lafraya A, Guazzaroni ME, Lopez-Cortes N, Chernikova TN, Golyshina OV, Nechitaylo TY, Plumeier I, Pieper DH, Yakimov MM, Savchenko A, Golyshin PN, Ferrer M Biochem J. 2013 Jun 10. PMID:23750508[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

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References

  1. Alcaide M, Tornes J, Stogios PJ, Xu X, Gertler C, Di Leo R, Bargiela R, Lafraya A, Guazzaroni ME, Lopez-Cortes N, Chernikova TN, Golyshina OV, Nechitaylo TY, Plumeier I, Pieper DH, Yakimov MM, Savchenko A, Golyshin PN, Ferrer M. Single residues dictate the co-evolution of dual esterases - MCP hydrolases from the alpha/beta hydrolase family. Biochem J. 2013 Jun 10. PMID:23750508 doi:10.1042/BJ20130552

Contents


PDB ID 4i3f

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