Major capsid protein

3D Structures of major capsid protein

Updated on 04-December-2025

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• Major capsid protein L1
  • 3iyj – MCP – bovine papilloma virus 1 – Cryo EM
    
  • 6l31 – Hpv6MCP – human papilloma virus 6 – Cryo EM
    
  • 7ew5 – Hpv6MCP + antibody
    
  • 2r5k – Hpv11MCP – human papilloma virus 11
    
  • 2r5h – Hpv16MCP – human papilloma virus 16
    
  • 3j7g, 3j6r, 5kep, 5keq, 5bsp, 6bt3, 7kzf – Hpv16MCP – Cryo EM
    
  • 1dzl – Hpv16MCP (mutant) – Cryo EM
    
  • 3j8v, 3j8w, 3j8z, 3jba, 6bsp, 7cn2, 8yef, 8yeg, 8yeh, 8yei, 9ml1, 9ml2, 9ml3 – Hpv16MCP + antibody – Cryo EM
    
  • 5w1o – Hpv16MCP + heparin
    
  • 2r5i – Hpv18MCP – human papilloma virus 18
    
  • 5w1x – Hpv18MCP (mutant) + heparin
    
  • 6ige – Hpv33MCP (mutant) – human papilloma virus 33
    
  • 2r5j – Hpv35MCP – human papilloma virus 35
    
  • 6igf – Hpv52MCP – human papilloma virus 52
    
  • 6igc, 6igd, 5y9e – Hpv58MCP – human papilloma virus 58
    
  • 7dn5 – Hpv58MCP – Cryo EM
    
  • 5y9c – Hpv58MCP + antibody
    
  • 7dnh, 7dnk, 7dnl – Hpv58MCP + antibody – Cryo EM
    
  • 5j6r – Hpv59MCP (mutant) – human papilloma virus 59
    
  • 5jb1 – Hpv59MCP – Cryo EM
    
  • 5y9f – Hpv59MCP + antibody
    
• Major capsid protein in empty capsid
  • 7qwx, 7qwz, 8a5t, 8pe4 – MCP – yeast – Cryo EM
    
  • 6g45 – MCP – mavirus
    
  • 7vi9, 7via – bplMCP – bacteriophage lambda – Cryo EM
    
  • 1c5e – bplMCP D
    
  • 7sj5 – bplMCP (mutant)
    
  • 9lbm – MCP GP3 – bacteriophage phi – Cryo EM
    
  • 3nxg, 3s7v, 4mbx, 4poq, 4x0y, 6y9i – pmvMCP VP1 – polyomavirus
    
  • 3iys – pmvMCP VP1 – Cryo EM
    
  • 3s7x, 4jcd, 4jce, 4jcf, 4wdy, 4wdz, 4we0, 7b69, 7b6a, 7b6c, 8agh, 8ago, 8ah0, 8ah1 – pmvMCP VP1 (mutant)
    
  • 6iuk, 6ou9, 6ouu – nvMCP – norovirus – Cryo EM
    
  • 4oov, 4p12, 4p2n, 5zv9 – nvMCP P domain
    
  • 1if0, 1ohg, 2frp, 2ft1, 3qpr – ebpMCP – Enterobacteria phage HK97
    
  • 3ddx – ebpMCP – Cryo EM
    
  • 2fs3, 3e8k – ebpMCP (mutant)
    
  • 2fte, 2gp1 – ebpMCP – Cryo EM
    
  • 1cjd, 1hqn, 1hx6, 7ook – Prd1MCP – Enterobacteria phage PRD1
    
  • 1gw7, 1gw8 – Prd1MCP – Cryo EM
    
  • 3izg, 3j7w, 3j7x – MCP – Enterobacteria phage T7 – Cryo EM
    
  • 3j1p – rhdvMCP 1766-2344 – rhdv – Cryo EM
    
  • 4egt – rhdvMCP P domain
    
  • 4ejr – rhdvMCP S domain
    
  • 6ojn, 8hif – MCP – Singapore grouper iridovirus – Cryo EM
    
  • 8ta7 – MCP – Tenebrio molitor – Cryo EM
    
  • 6ku9, 6l2t – asfvMCP – asfv - Cryo EM
    
  • 8ch5 – MCP – Escherichia coli - Cryo EM
    
  • 3kk5 – MCP – amoeba
    
  • 3j7v, 5tjt, 6okb, 6omc, 9jod – EpMCP – Escherichia phage - Cryo EM
    
  • 7ro2, 7ro3, 7ro4, 7ro5, 7ro6, 7rob, 7roc, 7rod, 7roe, 7rog, 7roh, 7roi – MCP – Sulfolobus monocaudavirus - Cryo EM
    
  • 6tsw, 9ffg, 9ffh – RcMCP – Rhodobacter capsulatus - Cryo EM
    
  • 6r3a, 6r3b – BpMCP – Bacillus phage - Cryo EM
    
  • 5uu5, 8i1t, 8i1v – SpMCP – Salmonella phage - Cryo EM
    
  • 8eb4, 8eck – MCP – Gordonia phage - Cryo EM
    
  • 9eg4 – MCP – Legionella phage - Cryo EM
    
  • 8gn5 – MCP – Lederberg virus – Cryo EM
    
  • 8gta – MCP – Dinoroseobacter phage – Cryo EM
    
  • 8t9e – ZmMCP – Zophobas morio – Cryo EM
    
  • 8zdi – MsMCP – Mycobacterium smegmatis - Cryo EM
    
  • 8e16, 8ec8 – MpMCP – Mycobacterium phage - Cryo EM
    
  • 7z90 – MCP – Leishmania RNA virus – Cryo EM
    
  • 8a01, 8a02, 8a03, 8a04 – fbpMCP – Flavobacterium phage - Cryo EM
    
  • 1no7 – hhvMCP vp5 – Human herpesvirus
    
  • 5tip, 5tiq – pbcvMCP – pbcv
    
  • 2xvr – MCP – Enterobacteria phage T7 – Cryo EM
    
  • 2vvf – MCP – corticovirus phage
    
  • 7yjl – MCP – Melbourne virus – Cryo EM
    
  • 5j7u – MCP – faustovirus
    
  • 7oz4 – MCP – Ralstonia virus – Cryo EM
    
  • 3jb5 – MCP – Propionibacterium phage – Cryo EM
    
  • 8eco – MCP – Microbacterium phage – Cryo EM
    
  • 8vwh – MCP – Baculovirus – Cryo EM
    
  • 9n5l, 9nbg – MCP – Parvovirus – Cryo EM
    
  • 8vd5 – dvMCP – Dubowvirus - Cryo EM
  • 6wh3 – MCP – pmmv - Cryo EM
  • 1qhd – MCP – Rotavirus
    
  • 9h1s – mnpvMCP – MNPV – Cryo EM
    
  • 5oxe – MCP – apbv – Cryo EM
    
  • 6oma – T5MCP – Escherichia phage T5 – Cryo EM
    
  • 7y3t – MCP – Klebsiella phage – Cryo EM
    
  • 5lii – MCP – Staphylococcus phage - Cryo EM
    
  • 8b4z – MCP – Rosellinia virus - Cryo EM
    
• Major capsid protein in capsomere
  • 5vku, 5zz8, 6cgr, 6lgl, 6lgn, 6m6g, 6m6h, 6m6i, 6nhj, 6odm, 6ppb, 6pph, 6q1f, 6w19, 6w2d, 7bsi, 7et3, 7etj, 7eto, 7fj1, 7fj3, 7liv, 8hex, 8hey, 8tep, 8tes, 8tet, 8teu, 8tew, 8x9w, 8x9x, 8x9y, 8xa0, 8xa1, 8xa2, 8xa3 – hhvMCP in capsomere – Cryo EM
    
  • 8i8a, 8vwi, 8vwj, 9h2a, 9h2b, 9h2j – mnpvMCP in capsomere – Cryo EM
    
  • 9kmh – FcwlMCP in capsomere – bacteriophage FCWL1 – Cryo EM
    
  • 8phq, 8phs, 8phu, 8pkh – MCP in capsomere – borellia bacteriophage – Cryo EM
    
  • 6ncl – pbcvMCP in capsomere – Cryo EM
    
  • 5vf3 – T4MCP in capsomere – bacteriophage T4 - Cryo EM
  • 8u10 – SpMCP in capsomere – Cryo EM
  • 8fwg, 8fxp, 8fxr – MCP in capsomere – Agrobacterium phage - Cryo EM
  • 2w0c – papMCP in capsomere – Pseudoalteromonas phage
    
  • 6w2e, 7bqx, 7br7, 7br8 – MCP in capsomere – Epstein-Barr virus – Cryo EM
    
  • 7qoh, 7qoi – bpMCP in capsomere – Bacterioides phage – Cryo EM
    
  • 9mjn – ppMCP in capsomere – Pectobacterium phage – Cryo EM
    
  • 6tb9, 6tba, 6tui – RcMCP in capsomere – Cryo EM
    
  • 8xqb – bplMCP in capsomere – Cryo EM
    
  • 8qsy – MCP in capsomere – Haloferax tailed virus - Cryo EM
    
  • 1w8x – Prd1MCP in capsomere – Cryo EM
    
• Major capsid protein other complexes
  • 8eci – MCP + capsid decoration protein – arthrobacter phage – Cryo EM
    
  • 6wkk – MCP + capsid decoration protein – Bacillus virus – Cryo EM
    
  • 8zvi – T5MCP + capsid decoration protein – Cryo EM
    
  • 9kmg – FcwlMCP + capsid decoration protein – Cryo EM
    
  • 7vii, 7vik – bplMCP + capsid decoration protein – Cryo EM
    
  • 8vji – MCP + capsid decoration protein – chivirus chi - Cryo EM
    
  • 9cul – ppMCP + capsid decoration protein – Cryo EM
    
  • 8cjz – MCP + capsid decoration protein – bacteriophage - Cryo EM
    
  • 8phr – MCP + capsid decoration protein + scaffold protein – borrelliella phage - Cryo EM
    
  • 8k39, 8xou – bplMCP + portal protein – Cryo EM
  • 6uzc – T4MCP + portal protein - Cryo EM
  • 7vrt, 8gmo – T4MCP + vertex protein – Cryo EM
  • 7vs5 – T4MCP + vertex protein + small outer capsid protein –Cryo EM
  • 8t9r – T4MCP + outer capsid protein – Cryo EM
  • 9lbz – MCP + portal protein – Escherichia phage N4 - Cryo EM
  • 9d9w – MpMCP + portal protein - Cryo EM<br
  • 8vde – dvMCP + portal protein - Cryo EM
  • 8xb6 – MCP + portal protein – Acinetobacter phage - Cryo EM
  • 8u11 – spMCP + portal protein + gp4 + gp10 + tail spike protein – Cryo EM
  • 7jw1 – MCP + size determination protein – Escherichia phage P2 - Cryo EM
  • 8t1x – MCP + outer capsid protein – Escherichia phage T4 - Cryo EM
  • 8y3p, 8y3r, 8zl9 – asfvMCP VP1 + antibody – Cryo EM
    
  • 7pa6, 7pa7, 7paa – pmvMCP VP1 + scFv
    
  • 7pa8, 7pa9, 9rm2 – pmvMCP VP1 + antibody
    
  • 3nxd, 4mby, 4mbz, 4por, 4pos, 4pot, 4x05, 4x0z, 4x10, 4x11, 4x12, 4x13, 4x14, 4x15, 4x16, 4x17, 7zil, 7zim, 7zin, 7zio, 7zip – pmvMCP VP1 + polysaccharide
    
  • 4ops, 4p25, 5lkc, 5lkk, 5zvc – nvMCP P domain + polysaccharide
    
  • 8en0, 8en3 – nvMCP + nanobody
    
  • 6n8d – nvMCP P domain + antibody
    
  • 7rwz – MCP + CCM – Staphylococcus aureus - Cryo EM
    
  • 8egt – spMCP + gp19 - Cryo EM
    
  • 8des – EpMCP + DNA binding protein - Cryo EM
    
  • 3j4u, 8ec2, 8ecj, 8zdk – MsMCP + cementing protein - Cryo EM
    
  • 8zdh – MCP + cementing protein – Bordetella phage - Cryo EM
    
  • 6j3q – MCP + cementing protein – Microcystis phage - Cryo EM
    
  • 9jwb – MCP + cementing protein + plastocyanin-like domain containing protein – Anabaena phage - Cryo EM
    
  • 9c2d – SpMCP + structural protein + tail protein – Shigella phage - Cryo EM
    
  • 9d7z – SpMCP + Ig-like domain containing protein - Cryo EM
    
  • 3j26 – MCP + V20 – sputnik virophage – Cryo EM
    
  • 6djy – MCP + turret protein + clamp protein – fako virus – Cryo EM
    
  • 8t9c, 8t9x, 8tje – ZmMCP + DNA – Cryo EM
    
  • 8rbs – MCP + penton protein – ehv – Cryo EM
    
  • 6q5u – MCP + infectivity protein + spike protein + penton protein – Enterobacteria phage PR772 – Cryo EM
    
  • 9ld7 – MCP + Gp17 – Enterobacteria phage N4 – Cryo EM
    
  • 7bw6 – MCP + capsomere interacting protein + triplex capsid protein 1 + triplex capsid protein 2 – Varicella-zoster virus – Cryo EM
    
  • 6b43, 6ppd – hhvMCP + capsomere interacting protein + triplex capsid protein 1 + triplex capsid protein 2 – Varicella-zoster virus – Cryo EM
    
  • 7qof – bpMCP + capsid fiber protein + gp36 – Cryo EM
    
  • 6qvk, 6qyd, 6qz0 – MCP + capsid fiber protein – Salasvirus phi29 – Cryo EM
    
  • 7zzz – fbpMCP + vertex protein + spike protein – Cryo EM
    
  • 5wk1 – papMCP + stabilizing protein – Cryo EM
    
  • 9gay, 9gaz, 9gb0 – MCP + gp48 – Clostridium difficile - Cryo EM
    
  • 7kmx – MCP + gp48 – Vibrio phage - Cryo EM
    
  • 8f2m – BpMCP + capsid assembly scaffolding protein - Cryo EM
    

Proteopedia Page Contributors and Editors (what is this?)

Michal Harel