User contributions for Lauren Ferris
From Proteopedia
Results for Lauren Ferris talk block log uploads logs
A user with 185 edits. Account created on 26 January 2012.
30 April 2014
- 14:3414:34, 30 April 2014 diff hist −9 Lauren Ferris/Sandbox 2 No edit summary current
- 14:3314:33, 30 April 2014 diff hist −21 Lauren Ferris/Sandbox 2 No edit summary
- 14:3214:32, 30 April 2014 diff hist +2 Lauren Ferris/Sandbox 2 No edit summary
- 14:3114:31, 30 April 2014 diff hist +1,164 Lauren Ferris/Sandbox 2 No edit summary
- 14:1014:10, 30 April 2014 diff hist +292 Lauren Ferris/Sandbox 2 No edit summary
- 13:5013:50, 30 April 2014 diff hist +165 Lauren Ferris/Sandbox 2 No edit summary
- 12:1312:13, 30 April 2014 diff hist −2 Lauren Ferris/Sandbox 2 No edit summary
- 12:1012:10, 30 April 2014 diff hist +9 Lauren Ferris/Sandbox 2 No edit summary
- 12:0812:08, 30 April 2014 diff hist −11 Lauren Ferris/Sandbox 2 No edit summary
- 12:0612:06, 30 April 2014 diff hist +27 Lauren Ferris/Sandbox 2 No edit summary
- 12:0412:04, 30 April 2014 diff hist −1 Lauren Ferris/Sandbox 2 No edit summary
- 12:0212:02, 30 April 2014 diff hist +21 Lauren Ferris/Sandbox 2 No edit summary
- 12:0012:00, 30 April 2014 diff hist +87 N File:DNA T4-6.jpg Interactions between DdrB and T4-T6. (PDB: 4HQB) This figure was generated using Pymol. current
- 11:5911:59, 30 April 2014 diff hist +1,709 Lauren Ferris/Sandbox 2 No edit summary
- 11:5211:52, 30 April 2014 diff hist +92 N File:Pentamer-pentamer.jpg Model of the pentamer-pentamer structure. (PDB: 4HQB) This figure was generated using Pymol. current
- 11:4811:48, 30 April 2014 diff hist +322 Lauren Ferris/Sandbox 2 No edit summary
- 11:4411:44, 30 April 2014 diff hist +250 N File:Alignment.jpg Alignment of the crystal structures of Deinococcus radiodurans and Deinococcus geothermalis. (A.) Alignment of chains c, (B.) Alignment of Chains a with DNA, (C.) Alignment of the pentamer. (PDB: 4EXW and 4HQB) This figure was generated using Pymol. current
- 11:4211:42, 30 April 2014 diff hist +158 N File:A chains.jpg The pentamer-pentamer interface is also stabilized by salt bridges and hydrogen bonds between the A chainds. (PDB:4HQB) This figure was generated using Pymol. current
- 11:4111:41, 30 April 2014 diff hist +150 N File:E loop.jpg The pentamer-pentamer interactions are stabilized by interactions involving the hairpin of chain E. (PDB:4HQB). This figure was generated using Pymol. current
- 11:3911:39, 30 April 2014 diff hist +91 N File:T7-8.jpg Interactions between DdrB and T7 and T8. (PDB: 4HQB) This figure was generated using Pymol. current
- 11:3511:35, 30 April 2014 diff hist +87 N File:T1-3.jpg Interactions between DdrB and T1-T3. (PDB: 4HQB) This figure was generated using Pymol. current
- 11:3311:33, 30 April 2014 diff hist +296 N File:Electrostatics pentamer.jpg The electrostatic charges in the DdrB pentamer. Blue represents positive charges, while red represents negative charges. A positive “track” around the top of the pentamer may enable ssDNA binding to one side of the pentamer (left image). (PDB: 4HQB) current
- 11:3211:32, 30 April 2014 diff hist +174 N File:Electrostatics monomer.jpg The electrostatic charges in the DdrB monomer. Blue represents positive charges, while red represents negative charges. (PDB: 4HQB). This figure was generated using Pymol. current
- 11:2911:29, 30 April 2014 diff hist +306 N File:OB fold.jpg This figure highlights the differences between the classic OB fold found in single-stranded binding proteins and the novel structural features of DdrB. The OB fold is observed in the protein verotoxin-1, PDB code 2XSC . DdrB is modeled from the PDB stru current
- 11:2811:28, 30 April 2014 diff hist +255 Lauren Ferris/Sandbox 2 No edit summary
28 April 2014
- 14:1414:14, 28 April 2014 diff hist −211 Lauren Ferris/Sandbox 2 No edit summary
- 14:1114:11, 28 April 2014 diff hist −10 Lauren Ferris/Sandbox 2 No edit summary
- 14:0814:08, 28 April 2014 diff hist +6 Lauren Ferris/Sandbox 2 No edit summary
- 14:0714:07, 28 April 2014 diff hist +29 Lauren Ferris/Sandbox 2 No edit summary
- 14:0514:05, 28 April 2014 diff hist +29 Lauren Ferris/Sandbox 2 No edit summary
- 14:0414:04, 28 April 2014 diff hist +30 Lauren Ferris/Sandbox 2 No edit summary
- 13:5813:58, 28 April 2014 diff hist +104 Lauren Ferris/Sandbox 2 No edit summary
- 13:5413:54, 28 April 2014 diff hist +43 N File:Models.jpg From 4HQB. This was generated using pymol. current
- 13:5013:50, 28 April 2014 diff hist +21 Lauren Ferris/Sandbox 2 No edit summary
- 13:4813:48, 28 April 2014 diff hist +55 Lauren Ferris/Sandbox 2 No edit summary
- 13:4313:43, 28 April 2014 diff hist +24 Lauren Ferris/Sandbox 2 No edit summary
- 13:3913:39, 28 April 2014 diff hist +36 N File:DNA channel.jpg From 4HQB. This was made using Pymol current
- 13:3813:38, 28 April 2014 diff hist +4 Lauren Ferris/Sandbox 2 No edit summary
- 13:3613:36, 28 April 2014 diff hist +22 Lauren Ferris/Sandbox 2 No edit summary
- 13:3113:31, 28 April 2014 diff hist +1 Lauren Ferris/Sandbox 2 No edit summary
- 13:2813:28, 28 April 2014 diff hist −15 Lauren Ferris/Sandbox 2 No edit summary
- 13:2113:21, 28 April 2014 diff hist +37 Lauren Ferris/Sandbox 2 No edit summary
- 13:0613:06, 28 April 2014 diff hist −294 Lauren Ferris/Sandbox 2 No edit summary
- 12:5312:53, 28 April 2014 diff hist +542 Lauren Ferris/Sandbox 2 No edit summary
- 12:3512:35, 28 April 2014 diff hist +349 Lauren Ferris/Sandbox 2 No edit summary
- 12:2912:29, 28 April 2014 diff hist +279 Lauren Ferris/Sandbox 2 No edit summary
- 07:1307:13, 28 April 2014 diff hist −962 Lauren Ferris/Sandbox 2 No edit summary
- 06:5906:59, 28 April 2014 diff hist −1 Lauren Ferris/Sandbox 2 No edit summary
- 06:5606:56, 28 April 2014 diff hist +231 Lauren Ferris/Sandbox 2 No edit summary
- 06:2506:25, 28 April 2014 diff hist +977 Lauren Ferris/Sandbox 2 No edit summary
