Nucleoside diphosphate kinase 3D structures: Difference between revisions

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New page: ==3D structures of nucleoside diphosphate kinase== Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}} {{#tree:id=OrganizedByTopic|openlevels=0| *'''Nucleoside d...
 
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**[[1nsk]], [[1jxv]], [[3l7u]], [[4eno]] - hNDK A – human<BR />
**[[1nsk]], [[1jxv]], [[3l7u]], [[4eno]] - hNDK A – human<BR />
**[[1ehw]] - hNDK 4 (mutant) <BR />
**[[9gd6]] - hNDK A (mutant) – Cryo EM<br />
**[[3bbc]] - hNDK B (mutant)<br />
**[[8qvy]] - hNDK C<br />
**[[1ehw]] - hNDK D (mutant)
**[[3bbc]] - hNDK B (mutant)<br />
**[[3bbc]] - hNDK B (mutant)<br />
**[[1vya]] – NDK – maize<br />
**[[1vya]] – NDK – maize<br />
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**[[2az1]] - HsNDK – ''Halobacterium salinarum''<BR />
**[[2az1]] - HsNDK – ''Halobacterium salinarum''<BR />
**[[2hur]] - NDK – ''Escherichia coli''<BR />
**[[2hur]] - NDK – ''Escherichia coli''<BR />
**[[2vu5]] - NDK – ''Bacillus anthracis''<BR />
**[[2vu5]] - NDK – ''Bacillus anthracis''<BR />
**[[2zua]] - NDK – ''Haloarcula quadrata''<BR />
**[[2zua]] - NDK – ''Haloarcula quadrata''<BR />
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**[[6ay1]] – NDK – ''Helicobacter pylori''<br />
**[[6ay1]] – NDK – ''Helicobacter pylori''<br />
**[[6aes]] – NDK – ''Pseudomonas aeruginosa''<br />
**[[6aes]] – NDK – ''Pseudomonas aeruginosa''<br />
**[[6agy]] – NDK – ''Aspergillus fumigatus''<br />
**[[6agy]], [[6xp4]] – AfNDK – ''Aspergillus fumigatus''<br />
**[[6k3h]] – NDK – ''Aspergillus flavus''<br />
**[[6k3h]], [[6joh]] – NDK – ''Aspergillus flavus''<br />
**[[9o9r]], [[9oba]], [[9od6]], [[9zog]] – CpNDK – ''Cryptosporidium parvum''<br />


*NDK complex with adenine derivative
*NDK complex with adenine derivative


**[[2hvd]] - hNDK + ADP<BR />
**[[2hvd]] - hNDK A + ADP<BR />
**[[1ucn]], [[2hve]] - hNDK (mutant) + ADP<BR />
**[[1ucn]], [[2hve]] - hNDK A (mutant) + ADP<BR />
**[[1zs6]] - hNDK 3 + ADP<BR />
**[[7ztk]], [[8oov]] - hNDK A + CoA<br />
**[[7kpf]] - hNDK B + CoA derivative<br />
**[[1zs6]], [[8qw1]], [[8qw3]] - hNDK C + ADP
**[[8qvz]] - hNDK C + AMP
**[[7zl8]] - mNDK A + CoA derivative - mouse<br />
**[[7zlw]] - mNDK A + ADP <br />
**[[4uof]], [[4uoh]] - sNDK + ADP derivative – shrimp <br />
**[[4uof]], [[4uoh]] - sNDK + ADP derivative – shrimp <br />
**[[1ndp]], [[1kdn]], [[2bef]] – DdNDK + ADP<BR />
**[[1ndp]], [[1kdn]], [[2bef]] – DdNDK + ADP<BR />
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**[[4hr2]] - BtNDK + ADP<br />
**[[4hr2]] - BtNDK + ADP<br />
**[[5kk8]] - SmNDK + ADP<br />
**[[5kk8]] - SmNDK + ADP<br />
**[[6xp7]] - AfNDK + ADP<br />
**[[9pg0]] - CpNDK + AMP<br />
**[[9pfy]] - CpNDK + ATP<br />
**[[9obc]] - CpNDK + ADP<br />
**[[9oan]] - CpNDK + GDP + AMP-PNP<br />
**[[9ob9]] - CpNDK + ADP + CTP<br />


*NDK complex with thymidine derivative
*NDK complex with thymidine derivative
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**[[3ddi]] - ApNDK (mutant) + TDP – ''Acanthamoeba polyphaga''<BR />
**[[3ddi]] - ApNDK (mutant) + TDP – ''Acanthamoeba polyphaga''<BR />
**[[3em1]], [[3evw]], [[3fbc]], [[3fbf]], [[3g2x]], [[3evo]] - ApNDK (mutant) + TDP derivative<br />
**[[3em1]], [[3evw]], [[3fbc]], [[3fbf]], [[3g2x]], [[3evo]] - ApNDK (mutant) + TDP derivative<br />
**[[6xpv]] - AfNDK + TDP<br />
**[[9oai]] - CpNDK + TMP<br />


*NDK complex with cytosine derivative
*NDK complex with cytosine derivative
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**[[3q89]] - SaNDK + CDP<BR />
**[[3q89]] - SaNDK + CDP<BR />
**[[4fkx]] - TbNDK + CDP<br />
**[[4fkx]] - TbNDK + CDP<br />
**[[6xpw]] - AfNDK + CDP<br />
**[[9oak]] - CpNDK + CDP + CTP<br />


*NDK complex with guanine derivative
*NDK complex with guanine derivative


**[[1nue]] , [[3bbf]] - hNDK + GDP<BR />
**[[1nue]] , [[3bbf]] - hNDK B + GDP<BR />
**[[3bbb]] - hNDK B + GMP derivative + AMP derivative<br />
**[[3bbb]] - hNDK B + GMP derivative + AMP derivative<br />
**[[8qw0]] - hNDK C + GDP<br />
**[[1wkk]] - TtNDK + GDP<BR />
**[[1wkk]] - TtNDK + GDP<BR />
**[[2dxe]] - PhNDK + GDP<BR />
**[[2dxe]] - PhNDK + GDP<BR />
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**[[4fky]] - TbNDK + GTP<br />
**[[4fky]] - TbNDK + GTP<br />
**[[1s59]] - AtNDK + GDP derivative + GTP derivative<br />
**[[1s59]] - AtNDK + GDP derivative + GTP derivative<br />
**[[6xps]] - AfNDK + GDP<br />
**[[9yn9]] - CpNDK + GMP<br />


*NDK complex with uridine derivative
*NDK complex with uridine derivative


**[[8qw2]] - hNDK C + UDP
**[[1b99]] - DdNDK + UDP derivative<br />
**[[1b99]] - DdNDK + UDP derivative<br />
**[[3eic]] - ApNDK + UDP<BR />  
**[[3eic]] - ApNDK + UDP<BR />  
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**[[3q8v]] - SaNDK + UDP<BR />
**[[3q8v]] - SaNDK + UDP<BR />
**[[4f4a]] - TbNDK + UDP<br />
**[[4f4a]] - TbNDK + UDP<br />
**[[6xpt]] - AfNDK + UDP<br />
*NDK complex with inosine derivative
**[[6xpu]] - AfNDK + IDP<br />


*NDK other complexes
*NDK other complexes


**[[5ui4]] - hNDK + imidazole derivative<br />
**[[5ui4]] - hNDK A + imidazole derivative<br />
**[[1mn9]], [[3fkb]] - DdNDK (mutant) + antiviral drug<br />
**[[8oov]] - hNDK A + CoA<br />
**[[8pie]] - hNDK B + AT-9010<br />
**[[8pyw]] - hNDK B + AT-9052<br />
**[[8j07]] – hNDK7 in respiratory doublet microtubule – Cryo EM<br />
**[[9cpb]] – bNDK7 in fallopian tube cilia – bovine - Cryo EM<br />
**[[8otz]], [[9fqr]] – bNDK7 in sperm - Cryo EM<br />
**[[9cpc]] – NDK7 in brain ventricles cilia – pig - Cryo EM<br />
**[[8i7r]], [[8iyj]], [[8to0]] – mNDK7 in sperm flagella – Cryo EM<br />
**[[8x2u]] – mNDK5 in radial spoke – Cryo EM<br />
**[[8wzb]] – mNDK5 in head-neck complex – Cryo EM<br />
**[[8snb]] – NDK in doublet microtubule – sea urchin – Cryo EM<br />
**[[8g2z]], [[8g3d]], [[8sf7]] – NDK7 in doublet microtubule – ''Tetrahymena thermophila'' – Cryo EM<br />
**[[9e2g]], [[9e5c]] – NDK in doublet microtubule – ''Trypanosoma brucei'' – Cryo EM<br />
**[[9y6s]] – NDK in doublet microtubule – ''Leishmania tarentolae'' – Cryo EM<br />
**[[8glv]] – CrNDK in doublet microtubule – ''Chlamydomonas reinhardti'' – Cryo EM<br />
**[[7jrj]] – CrNDK 6 in radial spoke head  – Cryo EM<br />
**[[9d5n]] – NDK in doublet microtubule – ''Trichomonas vaginalis'' – Cryo EM<br />
**[[1mn9]], [[3fkb]] - DdNDK (mutant) + antiviral drug
**[[4cp5]] - DdNDK (mutant) + PMPAPP<br />
**[[4cp5]] - DdNDK (mutant) + PMPAPP<br />


Latest revision as of 07:05, 6 April 2026

3D structures of nucleoside diphosphate kinase

Updated on 06-April-2026

Proteopedia Page Contributors and Editors (what is this?)

Michal Harel

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