4l4t: Difference between revisions
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==Disease== | ==Structure of human MAIT TCR in complex with human MR1-6-FP== | ||
<StructureSection load='4l4t' size='340' side='right' caption='[[4l4t]], [[Resolution|resolution]] 2.00Å' scene=''> | |||
== Structural highlights == | |||
<table><tr><td colspan='2'>[[4l4t]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4L4T OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4L4T FirstGlance]. <br> | |||
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=6FP:2-AMINO-4-OXO-3,4-DIHYDROPTERIDINE-6-CARBALDEHYDE'>6FP</scene></td></tr> | |||
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4gup|4gup]], [[4l4v|4l4v]]</td></tr> | |||
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">MR1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN]), B2M ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN]), TCR alpha ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN]), TCR beta ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4l4t FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4l4t OCA], [http://pdbe.org/4l4t PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4l4t RCSB], [http://www.ebi.ac.uk/pdbsum/4l4t PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4l4t ProSAT]</span></td></tr> | |||
</table> | |||
== Disease == | |||
[[http://www.uniprot.org/uniprot/B2MG_HUMAN B2MG_HUMAN]] Defects in B2M are the cause of hypercatabolic hypoproteinemia (HYCATHYP) [MIM:[http://omim.org/entry/241600 241600]]. Affected individuals show marked reduction in serum concentrations of immunoglobulin and albumin, probably due to rapid degradation.<ref>PMID:16549777</ref> Note=Beta-2-microglobulin may adopt the fibrillar configuration of amyloid in certain pathologic states. The capacity to assemble into amyloid fibrils is concentration dependent. Persistently high beta(2)-microglobulin serum levels lead to amyloidosis in patients on long-term hemodialysis.<ref>PMID:3532124</ref> <ref>PMID:1336137</ref> <ref>PMID:7554280</ref> <ref>PMID:4586824</ref> <ref>PMID:8084451</ref> <ref>PMID:12119416</ref> <ref>PMID:12796775</ref> <ref>PMID:16901902</ref> <ref>PMID:16491088</ref> <ref>PMID:17646174</ref> <ref>PMID:18835253</ref> <ref>PMID:18395224</ref> <ref>PMID:19284997</ref> | [[http://www.uniprot.org/uniprot/B2MG_HUMAN B2MG_HUMAN]] Defects in B2M are the cause of hypercatabolic hypoproteinemia (HYCATHYP) [MIM:[http://omim.org/entry/241600 241600]]. Affected individuals show marked reduction in serum concentrations of immunoglobulin and albumin, probably due to rapid degradation.<ref>PMID:16549777</ref> Note=Beta-2-microglobulin may adopt the fibrillar configuration of amyloid in certain pathologic states. The capacity to assemble into amyloid fibrils is concentration dependent. Persistently high beta(2)-microglobulin serum levels lead to amyloidosis in patients on long-term hemodialysis.<ref>PMID:3532124</ref> <ref>PMID:1336137</ref> <ref>PMID:7554280</ref> <ref>PMID:4586824</ref> <ref>PMID:8084451</ref> <ref>PMID:12119416</ref> <ref>PMID:12796775</ref> <ref>PMID:16901902</ref> <ref>PMID:16491088</ref> <ref>PMID:17646174</ref> <ref>PMID:18835253</ref> <ref>PMID:18395224</ref> <ref>PMID:19284997</ref> | ||
== Function == | |||
[[http://www.uniprot.org/uniprot/HMR1_HUMAN HMR1_HUMAN]] Has antigen presentation function. Involved in the development and expansion of a small population of T-cells expressing an invariant T-cell receptor alpha chain called mucosal-associated invariant T-cells (MAIT). MAIT cells are preferentially located in the gut lamina propria and therefore may be involved in monitoring commensal flora or serve as a distress signal. Expression and MAIT cell recognition seem to be ligand-dependent.<ref>PMID:12794138</ref> [[http://www.uniprot.org/uniprot/B2MG_HUMAN B2MG_HUMAN]] Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system. | |||
<div style="background-color:#fffaf0;"> | |||
== Publication Abstract from PubMed == | |||
The mucosal-associated invariant T-cell antigen receptor (MAIT TCR) recognizes MR1 presenting vitamin B metabolites. Here we describe the structures of a human MAIT TCR in complex with human MR1 presenting a non-stimulatory ligand derived from folic acid and an agonist ligand derived from a riboflavin metabolite. For both vitamin B antigens, the MAIT TCR docks in a conserved manner above MR1, thus acting as an innate-like pattern recognition receptor. The invariant MAIT TCR alpha-chain usage is attributable to MR1-mediated interactions that prise open the MR1 cleft to allow contact with the vitamin B metabolite. Although the non-stimulatory antigen does not contact the MAIT TCR, the stimulatory antigen does. This results in a higher affinity of the MAIT TCR for a stimulatory antigen in comparison with a non-stimulatory antigen. We formally demonstrate a structural basis for MAIT TCR recognition of vitamin B metabolites, while illuminating how TCRs recognize microbial metabolic signatures. | |||
Recognition of vitamin B metabolites by mucosal-associated invariant T cells.,Patel O, Kjer-Nielsen L, Le Nours J, Eckle SB, Birkinshaw R, Beddoe T, Corbett AJ, Liu L, Miles JJ, Meehan B, Reantragoon R, Sandoval-Romero ML, Sullivan LC, Brooks AG, Chen Z, Fairlie DP, McCluskey J, Rossjohn J Nat Commun. 2013;4:2142. doi: 10.1038/ncomms3142. PMID:23846752<ref>PMID:23846752</ref> | |||
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |||
</div> | |||
<div class="pdbe-citations 4l4t" style="background-color:#fffaf0;"></div> | |||
==See Also== | ==See Also== | ||
*[[Beta-2 microglobulin|Beta-2 microglobulin]] | *[[Beta-2 microglobulin|Beta-2 microglobulin]] | ||
*[[T-cell receptor|T-cell receptor]] | |||
== | == References == | ||
<references/> | |||
[[Category: | __TOC__ | ||
[[Category: Beddoe, T | </StructureSection> | ||
[[Category: Birkinshaw, R W | [[Category: Human]] | ||
[[Category: Brooks, A G | [[Category: Beddoe, T]] | ||
[[Category: Chen, Z | [[Category: Birkinshaw, R W]] | ||
[[Category: Corbett, A J | [[Category: Brooks, A G]] | ||
[[Category: Eckle, S B.G | [[Category: Chen, Z]] | ||
[[Category: Fairlie, D P | [[Category: Corbett, A J]] | ||
[[Category: Kjer-Nielsen, L | [[Category: Eckle, S B.G]] | ||
[[Category: Liu, L | [[Category: Fairlie, D P]] | ||
[[Category: McCluskey, J | [[Category: Kjer-Nielsen, L]] | ||
[[Category: Meehan, B | [[Category: Liu, L]] | ||
[[Category: Miles, J J | [[Category: McCluskey, J]] | ||
[[Category: Nours, J Le | [[Category: Meehan, B]] | ||
[[Category: Patel, O | [[Category: Miles, J J]] | ||
[[Category: Reantragoon, R | [[Category: Nours, J Le]] | ||
[[Category: Rossjohn, J | [[Category: Patel, O]] | ||
[[Category: Sandoval-Romero, M L | [[Category: Reantragoon, R]] | ||
[[Category: Sullivan, L C | [[Category: Rossjohn, J]] | ||
[[Category: Sandoval-Romero, M L]] | |||
[[Category: Sullivan, L C]] | |||
[[Category: Immune system]] | [[Category: Immune system]] | ||
[[Category: Mait tcr]] | [[Category: Mait tcr]] | ||
Revision as of 05:30, 5 August 2016
Structure of human MAIT TCR in complex with human MR1-6-FP
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Proteopedia Page Contributors and Editors (what is this?)
Categories:
- Human
- Beddoe, T
- Birkinshaw, R W
- Brooks, A G
- Chen, Z
- Corbett, A J
- Eckle, S B.G
- Fairlie, D P
- Kjer-Nielsen, L
- Liu, L
- McCluskey, J
- Meehan, B
- Miles, J J
- Nours, J Le
- Patel, O
- Reantragoon, R
- Rossjohn, J
- Sandoval-Romero, M L
- Sullivan, L C
- Immune system
- Mait tcr
- Membrane protein-immune system complex
- Mhc class i-related protein
- Vitamin b metabolite