2ffs

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:06, 6 November 2024) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:2ffs.png|left|200px]]
 
-
<!--
+
==Structure of PR10-allergen-like protein PA1206 from Pseudomonas aeruginosa PAO1==
-
The line below this paragraph, containing "STRUCTURE_2ffs", creates the "Structure Box" on the page.
+
<StructureSection load='2ffs' size='340' side='right'caption='[[2ffs]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2ffs]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_aeruginosa_PAO1 Pseudomonas aeruginosa PAO1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FFS OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2FFS FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
{{STRUCTURE_2ffs| PDB=2ffs | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ffs FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ffs OCA], [https://pdbe.org/2ffs PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ffs RCSB], [https://www.ebi.ac.uk/pdbsum/2ffs PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ffs ProSAT], [https://www.topsan.org/Proteins/MCSG/2ffs TOPSAN]</span></td></tr>
-
 
+
</table>
-
===Structure of PR10-allergen-like protein PA1206 from Pseudomonas aeruginosa PAO1===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/Q9I4D2_PSEAE Q9I4D2_PSEAE]
-
 
+
== Evolutionary Conservation ==
-
==About this Structure==
+
[[Image:Consurf_key_small.gif|200px|right]]
-
2FFS is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Pseudomonas_aeruginosa_pao1 Pseudomonas aeruginosa pao1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FFS OCA].
+
Check<jmol>
-
[[Category: Pseudomonas aeruginosa pao1]]
+
<jmolCheckbox>
-
[[Category: Single protein]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ff/2ffs_consurf.spt"</scriptWhenChecked>
-
[[Category: Chruszcz, M.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-
[[Category: Cymborowski, M T.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Edwards, A.]]
+
</jmolCheckbox>
-
[[Category: Kirillova, O.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ffs ConSurf].
-
[[Category: MCSG, Midwest Center for Structural Genomics.]]
+
<div style="clear:both"></div>
-
[[Category: Minor, W.]]
+
__TOC__
-
[[Category: Onopriyenko, O.]]
+
</StructureSection>
-
[[Category: Savchenko, A.]]
+
[[Category: Large Structures]]
-
[[Category: Skarina, T.]]
+
[[Category: Pseudomonas aeruginosa PAO1]]
-
[[Category: Wang, S.]]
+
[[Category: Chruszcz M]]
-
[[Category: Zimmerman, M D.]]
+
[[Category: Cymborowski MT]]
-
[[Category: 7-stranded beta sheet]]
+
[[Category: Edwards A]]
-
[[Category: C-terminal helix]]
+
[[Category: Joachimiak A]]
-
[[Category: Mcsg]]
+
[[Category: Kirillova O]]
-
[[Category: Midwest center for structural genomic]]
+
[[Category: Minor W]]
-
[[Category: Protein structure initiative]]
+
[[Category: Onopriyenko O]]
-
[[Category: Psi]]
+
[[Category: Savchenko A]]
-
[[Category: Structural genomic]]
+
[[Category: Skarina T]]
-
 
+
[[Category: Wang S]]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Sep 28 15:08:43 2008''
+
[[Category: Zimmerman MD]]

Current revision

Structure of PR10-allergen-like protein PA1206 from Pseudomonas aeruginosa PAO1

PDB ID 2ffs

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools