9ddr

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m (Protected "9ddr" [edit=sysop:move=sysop])
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'''Unreleased structure'''
 
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The entry 9ddr is ON HOLD
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==Ternary substrate complex of DNA polymerase iota with DNA (template A), Ca2+, and dTTP==
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<StructureSection load='9ddr' size='340' side='right'caption='[[9ddr]], [[Resolution|resolution]] 2.15&Aring;' scene=''>
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Authors: Frevert, Z., Reusch, D., Freudenthal, B., Washington, M.T.
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== Structural highlights ==
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<table><tr><td colspan='2'>[[9ddr]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=9DDR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=9DDR FirstGlance]. <br>
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Description: Ternary substrate complex of DNA polymerase iota with DNA (template A), Ca2+, and dTTP
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.15&#8491;</td></tr>
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[[Category: Unreleased Structures]]
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=TTP:THYMIDINE-5-TRIPHOSPHATE'>TTP</scene></td></tr>
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[[Category: Freudenthal, B]]
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=9ddr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=9ddr OCA], [https://pdbe.org/9ddr PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=9ddr RCSB], [https://www.ebi.ac.uk/pdbsum/9ddr PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=9ddr ProSAT]</span></td></tr>
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[[Category: Reusch, D]]
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</table>
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[[Category: Washington, M.T]]
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== Function ==
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[[Category: Frevert, Z]]
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[https://www.uniprot.org/uniprot/POLI_HUMAN POLI_HUMAN] Error-prone DNA polymerase specifically involved in DNA repair. Plays an important role in translesion synthesis, where the normal high-fidelity DNA polymerases cannot proceed and DNA synthesis stalls. Favors Hoogsteen base-pairing in the active site. Inserts the correct base with high-fidelity opposite an adenosine template. Exhibits low fidelity and efficiency opposite a thymidine template, where it will preferentially insert guanosine. May play a role in hypermutation of immunogobulin genes. Forms a Schiff base with 5'-deoxyribose phosphate at abasic sites, but may not have lyase activity.<ref>PMID:11013228</ref> <ref>PMID:11251121</ref> <ref>PMID:11387224</ref> <ref>PMID:12410315</ref> <ref>PMID:14630940</ref> <ref>PMID:15199127</ref> <ref>PMID:15254543</ref>
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Homo sapiens]]
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[[Category: Large Structures]]
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[[Category: Freudenthal B]]
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[[Category: Frevert Z]]
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[[Category: Reusch D]]
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[[Category: Washington MT]]

Current revision

Ternary substrate complex of DNA polymerase iota with DNA (template A), Ca2+, and dTTP

PDB ID 9ddr

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