6itx

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Current revision (10:35, 27 March 2024) (edit) (undo)
 
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<StructureSection load='6itx' size='340' side='right'caption='[[6itx]], [[Resolution|resolution]] 2.75&Aring;' scene=''>
<StructureSection load='6itx' size='340' side='right'caption='[[6itx]], [[Resolution|resolution]] 2.75&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[6itx]] is a 6 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6ITX OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6ITX FirstGlance]. <br>
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<table><tr><td colspan='2'>[[6itx]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Duck_adenovirus_1 Duck adenovirus 1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6ITX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6ITX FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GLN:GLUTAMINE'>GLN</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.75&#8491;</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6itx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6itx OCA], [http://pdbe.org/6itx PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6itx RCSB], [http://www.ebi.ac.uk/pdbsum/6itx PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6itx ProSAT]</span></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GLN:GLUTAMINE'>GLN</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6itx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6itx OCA], [https://pdbe.org/6itx PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6itx RCSB], [https://www.ebi.ac.uk/pdbsum/6itx PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6itx ProSAT]</span></td></tr>
</table>
</table>
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<div style="background-color:#fffaf0;">
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== Function ==
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== Publication Abstract from PubMed ==
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[https://www.uniprot.org/uniprot/O11424_9ADEN O11424_9ADEN]
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Egg drop syndrome virus (EDSV) is an avian adenovirus that causes markedly decrease in egg production, and in the quality of the eggs when it infects chickens. Until now, EDSV virus-cell interactions are poorly understood, and the cellular receptor is still unknown. In the present study, we determined the atomic structure of the fiber head of EDSV (residues 377-644) at 2.74A resolution. Structure comparison with the (chick embryo lethal orphan) CELO long fiber head and human adenovirus fiber heads reveals that the avian adenovirus may interact with the same attachment factor in a unique fashion. Based on the previous studies of CELO virus, we assumed that the chicken coxsackievirus and adenovirus receptor (CAR) may be the attachment factor. We then demonstrate that the chicken CAR serves as a cellular attachment factor for EDSV based on three lines of evidences. Taken together, the results presented here are helpful for further exploring the pathogenesis related to the interaction between EDSV and host cells, and may be used for vaccine development and intervention strategies against EDSV infection.
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Unravelling the receptor binding property of egg drop syndrome virus (EDSV) from the crystal structure of EDSV fiber head.,Song Y, Wei Q, Liu Y, Feng H, Chen Y, Wang Y, Bai Y, Xing G, Deng R, Zhang G Int J Biol Macromol. 2019 Aug 2;139:587-595. doi: 10.1016/j.ijbiomac.2019.08.005. PMID:31381914<ref>PMID:31381914</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 6itx" style="background-color:#fffaf0;"></div>
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== References ==
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<references/>
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Duck adenovirus 1]]
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Song, Y]]
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[[Category: Song Y]]
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[[Category: Wei, Q]]
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[[Category: Wei Q]]
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[[Category: Avian adenovirus]]
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[[Category: Cell adhesion]]
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[[Category: Fiber protein]]
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Current revision

Structure of the C-terminal head domain of the avian adenovirus EDSV fiber

PDB ID 6itx

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Proteopedia Page Contributors and Editors (what is this?)

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