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| - | [[Image:1lvg.gif|left|200px]] | + | {{Seed}} |
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| | {{STRUCTURE_1lvg| PDB=1lvg | SCENE= }} | | {{STRUCTURE_1lvg| PDB=1lvg | SCENE= }} |
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| - | '''Crystal structure of mouse guanylate kinase in complex with GMP and ADP'''
| + | ===Crystal structure of mouse guanylate kinase in complex with GMP and ADP=== |
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| - | ==Overview==
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| - | Guanylate kinase (GMPK) is a nucleoside monophosphate kinase that catalyzes the reversible phosphoryl transfer from ATP to GMP to yield ADP and GDP. In addition to phosphorylating GMP, antiviral prodrugs such as acyclovir, ganciclovir, and carbovir and anticancer prodrugs such as the thiopurines are dependent on GMPK for their activation. Hence, structural information on mammalian GMPK could play a role in the design of improved antiviral and antineoplastic agents. Here we present the structure of the mouse enzyme in an abortive complex with the nucleotides ADP and GMP, refined at 2.1 A resolution with a final crystallographic R factor of 0.19 (R(free) = 0.23). Guanylate kinase is a member of the nucleoside monophosphate (NMP) kinase family, a family of enzymes that despite having a low primary structure identity share a similar fold, which consists of three structurally distinct regions termed the CORE, LID, and NMP-binding regions. Previous studies on the yeast enzyme have shown that these parts move as rigid bodies upon substrate binding. It has been proposed that consecutive binding of substrates leads to "closing" of the active site bringing the NMP-binding and LID regions closer to each other and to the CORE region. Our structure, which is the first of any guanylate kinase with both substrates bound, supports this hypothesis. It also reveals the binding site of ATP and implicates arginines 44, 137, and 148 (in addition to the invariant P-loop lysine) as candidates for catalyzing the chemical step of the phosphoryl transfer.
| + | The line below this paragraph, {{ABSTRACT_PUBMED_12036965}}, adds the Publication Abstract to the page |
| | + | (as it appears on PubMed at http://www.pubmed.gov), where 12036965 is the PubMed ID number. |
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| | + | {{ABSTRACT_PUBMED_12036965}} |
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| | ==About this Structure== | | ==About this Structure== |
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| | [[Category: Guanylate kinase]] | | [[Category: Guanylate kinase]] |
| | [[Category: Transferase]] | | [[Category: Transferase]] |
| - | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May 3 00:20:06 2008'' | + | |
| | + | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jul 2 22:25:46 2008'' |
Revision as of 19:25, 2 July 2008
Template:STRUCTURE 1lvg
Crystal structure of mouse guanylate kinase in complex with GMP and ADP
Template:ABSTRACT PUBMED 12036965
About this Structure
1LVG is a Single protein structure of sequence from Mus musculus. Full crystallographic information is available from OCA.
Reference
Structural characterization of the closed conformation of mouse guanylate kinase., Sekulic N, Shuvalova L, Spangenberg O, Konrad M, Lavie A, J Biol Chem. 2002 Aug 16;277(33):30236-43. Epub 2002 May 29. PMID:12036965
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