ATPase 3D structures: Difference between revisions

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**[[2jmx]] - bF1-ATPS+subunit O - bovine<br />
**[[2jmx]] - bF1-ATPS+subunit O - bovine<br />
**[[2r9v]] - F1-ATPS – ''Thermotoga maritima''<br />
**[[2r9v]] - TmF1-ATPS – ''Thermotoga maritima''<br />
**[[6foc]] – MsF-ATPase – ''Mycobacterium smegmatis''<br />
**[[6foc]] – MsF-ATPase – ''Mycobacterium smegmatis''<br />


Line 16: Line 16:


**[[1pyv]] - F1-ATPS – NMR – tobacco<br />
**[[1pyv]] - F1-ATPS – NMR – tobacco<br />
**[[1b9u]] – EcF1-ATPS membrane domain – ''Escherichia coli'' - NMR<BR />
**[[1b9u]] – EcF1-ATPS membrane domain – ''Escherichia coli'' -NMR<BR />
**[[4utq]] – EcF1-ATPS membrane domain + insertase YIDC – Cryo EM<BR />
**[[4utq]] – EcF1-ATPS membrane domain + insertase YIDC – Cryo EM<BR />
**[[1l2p]] – EcF1-ATPS dimerization domain<br />
**[[1l2p]] – EcF1-ATPS dimerization domain<br />
**[[2khk]] - EcF1-ATPS fragment – NMR<BR />
**[[2khk]] - EcF1-ATPS fragment – NMR<BR />
**[[4q4l]] - F1-ATPS – ''Burkholderia thailandensis''<br />
**[[4q4l]] - F1-ATPS – Burkholderia thailandensis<br />


*''F1F0 ATPase γ subunit''
*''F1F0 ATPase γ subunit''
Line 29: Line 29:
**[[2wgm]], [[1yce]] – F0-ATPS – ''Ilyobacter tartaricus''<br />
**[[2wgm]], [[1yce]] – F0-ATPS – ''Ilyobacter tartaricus''<br />
**[[2x2v]], [[4cbk]], [[4cbj]] – F0-ATPS – ''Bacillus pseudofirmus''<br />
**[[2x2v]], [[4cbk]], [[4cbj]] – F0-ATPS – ''Bacillus pseudofirmus''<br />
**[[4bem]] - F1F0-ATPS – ''Acetobacterium woodii''<br />
**[[4bem]] - F1F0-ATPS – Acetobacterium woodii<br />


*''F1F0 ATPase δ subunit''
*''F1F0 ATPase δ subunit''
Line 51: Line 51:
*''F1F0 ATPase α, β subunits''
*''F1F0 ATPase α, β subunits''


**[1sky]] – BsF1-ATPS – ''Bacillus'' sp. Ps3<br />
**[[1sky]] – BaF1-ATPS – Bacillus sp. Ps3<br />
**[[5cdf]] – PdATPase - ''Paracoccus denitrificans''<br />
**[[5cdf]] – PdATPase - ''Paracoccus denitrificans''<br />


*''F1F0 ATPase α,γ subunits''
*”F1F0 ATPase α,γ subunits”


**[[1c17]] – EcF1-ATPS – NMR<br />
**[[1c17]] – EcF1-ATPS – NMR<br />
Line 64: Line 64:
*''F1F0 ATPase β, δ subunits''
*''F1F0 ATPase β, δ subunits''


**[[2cly]] – bF1-ATPS + ATPS coupling factor - bovine
**[[2cly]] – bF1-ATPS + ATPS coupling factor - bovine<br />


*''F1F0 ATPase γ, ε subunits''
*''F1F0 ATPase γ, ε subunits''


**[[6tdx]] – F1-ATPS – ''Euglena gracilis'' – Cryo EM<br />
**[[1fs0]] – EcF1-ATPS<br />
**[[1fs0]] – EcF1-ATPS<br />
**[[5zwl]] – TeF1-ATPS<br />
**[[5zwl]] – TeF1-ATPS<br />
**[[6tdx]] – F1-ATPS – Euglena gracilis – Cryo EM<br />


*''F1F0 ATPase α, β, γ subunits''
*''F1F0 ATPase α, β, γ subunits''


**[[1ohh]], [[2jiz]], [[4tt3]], [[4tsf]], [[4z1m]] – bF1-ATPS+ IF1 inhibitor<br />
**[[1ohh]], [[2jiz]], [[4tt3]], [[4tsf]], [[4z1m]] – bF1-ATPS+ IF1 inhibitor <br />
**[[1e1q]], [[2w6e]], [[2w6f]], [[2w6g]], [[2w6h]], [[2w6i]], [[2w6j]] - bF1-ATPS<br />
**[[1e1q]], [[2w6e]], [[2w6f]], [[2w6g]], [[2w6h]], [[2w6i]], [[2w6j]] - bF1-ATPS<br />
**[[1e1r]] - bF1-ATPS+Mg+ADP+AlF4<br />
**[[1e1r]] - bF1-ATPS+Mg+ADP+AlF4<br />
Line 81: Line 81:
**[[1mab]], [[2f43]] - raF1-ATPS – rat<br />
**[[1mab]], [[2f43]] - raF1-ATPS – rat<br />
**[[6vwk]] - EcF1-ATPS <br />
**[[6vwk]] - EcF1-ATPS <br />
**[[6n2d]] – BaF1-ATPS – Cryo EM<br />


*''F1F0 ATPase α,β,γ,δ subunits''
*”F1F0 ATPase α,β,γ,δ subunits”


**[[1qo1]] - yF1-ATPS + protein 9 - yeast<br />
**[[1qo1]] - yF1-ATPS + protein 9 - yeast<br />
**[[7jgb]], [[7jgc]] – MsF0-ATPS – Cryo EM<br />


*''F1F0 ATPase α,β,γ,ε subunits''
*”F1F0 ATPase α,β,γ,ε subunits”


**[[1e79]] - bF1-ATPS<br />
**[[1jnv]] - EcF1-ATPS <br />
**[[1jnv]] - EcF1-ATPS <br />
**[[3oaa]] – EcF1-ATPS (mutant)<br />
**[[3oaa]] – EcF1-ATPS (mutant) <br />
**[[2qe7]], [[4xd7]] – F1-ATPS – ''Bacillus''<br />
**[[2qe7]], [[4xd7]] – BaF1-ATPS <br />
**[[5ik2]], [[5hkk]] – F1-ATPS – ''Cakdalkalibacillus thermarum''<br />
**[[5ik2]], [[5hkk]] – F1-ATPS – Cakdalkalibacillus thermarum<br />
**[[6foc]] – MsF-ATPS – ''Mycobacterium smegmatis''<br />
**[[6foc]] – MsF-ATPS<br />
**[[6q45]] – FnF1-ATPS  – ''Fusobacterium nucleatum''<br />
**[[6q45]] – FnF1-ATPS  – Fusobacterium nucleatum<br />


*''F1F0 ATPase α, β, γ, δ, ε subunits''
*''F1F0 ATPase α, β, γ, δ, ε subunits''
Line 102: Line 103:
**[[4yxw]] -  bF1-ATPS+ ANP<br />
**[[4yxw]] -  bF1-ATPS+ ANP<br />
**[[2xnd]], [[2xok]] - bF1-ATPS+ATPS lipid-binding protein<br />
**[[2xnd]], [[2xok]] - bF1-ATPS+ATPS lipid-binding protein<br />
**[[2wpd]], [[2wss]] - yF1-ATPS+subunit 9+Mg+ADP+ATP - yeast<br />
**[[2wpd]], [[2wss]] - yF1-ATPS+subunit 9+Mg+ADP+ATP<br />
**[[3oe7]], [[3oee]], [[3oeh]], [[3ofn]] - yF1-ATPS (mutant)<br />
**[[3oe7]], [[3oee]], [[3oeh]], [[3ofn]] - yF1-ATPS (mutant)<br />
**[[3fks]], [[3zry]], [[2hld]] - yF1-ATPS<br />
**[[3fks]], [[3zry]], [[2hld]] - yF1-ATPS<br />
**[[3zia]] - yF1-ATPS + inhibitor protein<br />
**[[3zia]] - yF1-ATPS + inhibitor protein<br />
**[[6f5d]] - F1-ATPS + ribonucleoprotein P18 – ''Trypanosoma brucei''<br />
**[[6f5d]] - F1-ATPS + ribonucleoprotein P18 – Trypanosoma brucei<br />
**[[3j0j]] – TtATPS α,β,γ,δ,ε,ζ - Cryo EM<br />
**[[3j0j]] – TtATPS α,β,γ,δ,ε,ζ - Cryo EM<br />


*''F1F0 ATPase α,β,γ,δ,ε,9,B,D,6,O subunits''


**[[4b2q]] – yATPase – yeast - Cryo EM
*''F1F0 ATPase multiple subunits''
 
*''F1F0 ATPase α,β,γ,δ,ε,A,C subunits''
 
**[[5dn6]] – PdATPase + zeta inhibitor protein <br />
 
*''F1F0 ATPase α,β,γ,δ,ε,A,B,C subunits''
 
**[[5t4q]], [[5t4p]], [[5t4o]], [[6oqr]], [[6oqs]], [[6oqt]], [[6oqu]], [[6oqv]], [[6pqv]], [[6wnq]], [[6wnr]]  – EcATPase – Cryo EM<br />
 
*''F1F0 ATPase α,β,γ,δ,ε,A,B,B’,C subunits''
 
**[[6fki]], [[6fkh]], [[6fkf]] – sATPase – spinach<br />
 
*''F1F0 ATPase α,β,γ,δ,ε,A,B,C,D,F,H,AAP1 subunits''
 
**[[5lqz]], [[5lqy]], [[5lqx]] – ATPase  + ATPase inhibitor protein – ''Ogataea angusta'' - Cryo EM<br />
 
*''F1F0 ATPase α,β,γ,δ,ε,B1,C1,D,O subunits''
 
**[[5fil]], [[5fik]], [[5fij]], [[5ari]], [[5arh]], [[5are]], [[5ara]] – bATPase – Cryo EM<br />
 
*''F1F0 ATPase A,B,C,D,E,F,G,J,K subunits''
 
**[[6b2z]] – yATPase – Cryo EM<br />
 
*''F1F0 ATPase α,β,γ,δ,ε,A,D,E,F,G,J,K,H,4,5,6,9 subunits''
 
**[[6b8h]] – yATPase<br />
 
*''F1F0 ATPase α,γ,δ,ε,D,F,J,H,4,5,8,9 subunits''


**[[5fil]], [[5fik]], [[5fij]], [[5ari]], [[5arh]], [[5are]], [[5ara]], [[6zbb]] – bATPase - Cryo EM<br />
**[[1bmf]] - bF1-ATPS<br />
**[[1bmf]] - bF1-ATPS<br />
**[[3dze]] – bF1-ATPS subunit S<br />
**[[3dze]] – bF1-ATPS subunit S<br />
**[[1cow]] - bF1-ATPS+aurovertin B<br />
**[[1cow]] - bF1-ATPS+aurovertin B<br />
**[[6cp6]] – yATPase – Cryo EM<br />
**[[6yy0]] - bF1-ATPS+ inhibitor + coupling factor – Cryo EM<br />
 
**[[6j54]], [[6j5a]], [[6j5i]], [[6j5j]], [[6zmr]] – pATPase – pig - Cryo EM<br />
*''F1F0 ATPase α,b,γ,δ,ε,D,F,J,H,4,5,8,9 subunits''
**[[6j5k]] – pATPase + IF1 - Cryo EM<br />
 
**[[6tt7]], [[6za9]] – ATPase – sheep - Cryo EM<br />
**[[4b2q]], [[6b8h]], [[6b2z]], [[6cp6]], [[6cp7]], [[6wtd]] – yATPase – Cryo EM – yeast<br />
**[[6cp3]] – yATPase + oligomycin<br />
**[[6cp3]] – yATPase + oligomycin<br />
*''F1F0 ATPase 4,6,8,9,D,F,I,J subunits''
**[[6cp7]] – yATPase – Cryo EM<br />
*''F1F0 ATPase 4,8,9,A,D,F,J subunits''
**[[6cp5]] – yATPase + oligomycin – Cryo EM<br />
**[[6cp5]] – yATPase + oligomycin – Cryo EM<br />
**[[4f4s]] – yATPase subunit 9 + oligomycin <br />
**[[4f4s]] – yATPase subunit 9 + oligomycin <br />
 
**[[5dn6]] – PdATPase + zeta inhibitor protein <br />
*'''V-ATPase'''
**[[5t4q]], [[5t4p]], [[5t4o]], [[6oqr]], [[6oqs]], [[6oqt]], [[6oqu]], [[6oqv]], [[6pqv]], [[6wnq]], [[6wnr]] – EcATPase – Cryo EM<br />
**[[6vm1]] – sATPase – Cryo EM<br />
**[[6fkf]], [[6fkh]], [[6fgki]], [[6vmb]], [[6vmd]], [[6vof]], [[6vog]], [[6voh]], [[6voi]], [[6voj]], [[6vok]], [[6vol]], [[6vom]], [[6von]], [[6voo]] – sATPase + ADP + ATP – Cryo EM<br />
**[[5lqz]], [[5lqy]], [[5lqx]] – ATPase + ATPase inhibitor protein – Ogataea angusta - Cryo EM<br />
**[[6tmh]], [[6tmj]], [[6tmk]] – ATPase + ATPase inhibitor protein + OSCP – Toxoplasma gondii - Cryo EM<br />
**[[6ynz]], [[6yo0]] – ATPase – Tetrashymena thermophila - Cryo EM<br />
**[[6rd6]], [[6rd9]], [[6rda]], [[6rdb]], [[6rdc]], [[6rdd]], [[6rde]], [[6rdf]], [[6rdg]], [[6rdi]], [[6rdj]], [[6rdk]], [[6rdl]], [[6rdm]], [[6rdn]], [[6rdp]], [[6rdq]], [[6rds]], [[6rdt]], [[6rdu]], [[6rdv]], [[6rdx]], [[6rdy]], [[6rdz]], [[6re0]], [[6re1]], [[6re2]], [[6re3]], [[6re4]], [[6re5]], [[6re6]], [[6re7]], [[6re8]], [[6re9]], [[6rea]], [[6reb]], [[6rec]], [[6red]], [[6ree]], [[6ref]], [[6rer]], [[6res]], [[6reu]] – ATPase – Polytomella - Cryo EM<br />
*V-ATPase


*''V-ATPase subunit A''
*''V-ATPase subunit A''


**[[5i1m]] – yATPase  <br />
**[[5i1m]] – yATPase  <br />
**[[6hh0]] – yATPase  helix 7 - NMR<br />
**[[3i4l]] - PhATPS subunit A+AMPPNP<br />
**[[3i4l]] - PhATPS subunit A+AMPPNP<br />
**[[3mfy]], [[3m4y]], [[3nd8]], [[3nd9]], [[3p20]], [[3qg1]], [[3qia]], [[3qjy]], [[3sdz]], [[3se0]], [[5x09]] - PhATPS subunit A (mutant)<br />
**[[3mfy]], [[3m4y]], [[3nd8]], [[3nd9]], [[3p20]], [[3qg1]], [[3qia]], [[3qjy]], [[3sdz]], [[3se0]], [[5x09]] - PhATPS subunit A  
(mutant)<br />
**[[3i72]], [[3i73]], [[3ikj]] - TtATPS subunit A (mutant)<br />
**[[3i72]], [[3i73]], [[3ikj]] - TtATPS subunit A (mutant)<br />
**[[4o1s]] - ATPS subunit A – ''Thermoplasma volcanium''<br />
**[[4o1s]] - ATPS subunit A – Thermoplasma volcanium<br />
**[[5bn5]] – NeATPase + NEQ263 – ''Nanoarchaeum equitans'' <br />
**[[5bn5]] – NeATPase + NEQ263 – Nanoarchaeum equitans  <br />
**[[5bn4]] – NeATPase + NEQ263 + ANP  <br />
**[[5bn4]] – NeATPase + NEQ263 + ANP  <br />
**[[5bn3]] – NeATPase + NEQ263 + ADP  <br />
**[[5bn3]] – NeATPase + NEQ263 + ADP  <br />
Line 184: Line 158:


**[[3v3c]] - ATPS subunit C - pea<br />
**[[3v3c]] - ATPS subunit C - pea<br />
**[[2w5j]] - sATPS subunit C - spinach<br />
**[[2w5j]] - sATPS subunit C <br />
**[[1u7l]], [[3u2f]], [[3u2y]], [[3u32]], [[3ud0]] - yATPS subunit C<br />
**[[1u7l]], [[3u2f]], [[3u2y]], [[3u32]], [[3ud0]] - yATPS subunit C<br />
**[[1ijp]], [[1l6t]] – EcF1-ATPS subunit C (mutant) - NMR<br />
**[[1ijp]], [[1l6t]] – EcF1-ATPS subunit C (mutant) - NMR<br />
**[[1r5z]], [[1v9m]] - TtATPS subunit C – ''Thermus thermophilus''<br />
**[[1r5z]], [[1v9m]] - TtATPS subunit C – ''Thermus thermophilus''<br />
**[[3lg8]] - MtATPS subunit C C-terminal<br />
**[[3lg8]] - MtATPS subunit C C-terminal<br />
**[[2wie]], [[2xqs]], [[2xqt]], [[2xqu]] - ATPS subunit C – ''Arthrospira platensis''<br />
**[[2wie]], [[2xqs]], [[2xqt]], [[2xqu]] - ATPS subunit C – Arthrospira platensis<br />
**[[3zk1]], [[3zk2]] - FnATPS subunit C <br />
**[[3zk1]], [[3zk2]] - FcATPS subunit C <br />


*''V-ATPase subunit D+F''
*''V-ATPase subunit D+F''
Line 226: Line 200:
*''V-ATPase subunit I''
*''V-ATPase subunit I''


**[[3rrk]] – ATPS subunit I N terminal – ''Meiothermus ruber''
**[[3rrk]] – ATPS subunit I N terminal – ''Meiothermus ruber''<br />


*''V-ATPase multi subunits''
**''V-ATPase multi subunits''


**[[6wlw]] – hATPase – Cryo EM <br />
**[[6wlz]], [[6wm2]], [[6wm3]], [[6wm4]] – hATPase + ADP – Cryo EM <br />
**[[6xbw]], [[6xby]], [[6zg7]], [[6zg8]], [[6zik]], [[6ziq]], [[6zit]], [[6ziu]], [[6zpo]], [[6zqm]], [[6zqn]] – bATPase – Cryo EM <br />
**[[7khr]] – bATPase + antibiotics – Cryo EM <br />
**[[6vq6]], [[6vq7]], [[6vq8]] - raATPS subunit A,B,C,D,E,E2, F,G,K, S1 + effector + renin receptor – Cryo EM<br />
**[[6vq6]], [[6vq7]], [[6vq8]] - raATPS subunit A,B,C,D,E,E2, F,G,K, S1 + effector + renin receptor – Cryo EM<br />
**[[6vq9]], [[6vqa]], [[6vqb]] - raATPS subunit A,B,D,E,E2,G,H + effector – Cryo EM<br />
**[[6vq9]], [[6vqa]], [[6vqb]] - raATPS subunit A,B,D,E,E2,G,H + effector – Cryo EM<br />
Line 239: Line 217:
**[[5voz]], [[5voy]], [[5vox]] - yATPS subunit A,C,C’,C’’,D,E,F,H – Cryo EM<br />
**[[5voz]], [[5voy]], [[5vox]] - yATPS subunit A,C,C’,C’’,D,E,F,H – Cryo EM<br />
**[[6c6l]] - yATPS subunit A,C,C’,C’’,D,E,F + V0 assembly protein 1<br />
**[[6c6l]] - yATPS subunit A,C,C’,C’’,D,E,F + V0 assembly protein 1<br />
**[[6o7t]] - yATPS subunit A,C,C’,C’’,E + V0 assembly protein 1 – Cryo EM<br />
**[[6o7t]], [[6m0r]], [[6m0s]] - yATPS subunit A,C,C’,C’’,E + V0 assembly protein 1 – Cryo EM<br />
**[[6o7u]] - yATPS subunit C,C’,C’’,D,E + V0 assembly protein 1 – Cryo EM<br />
**[[6o7u]] - yATPS subunit C,C’,C’’,D,E + V0 assembly protein 1 – Cryo EM<br />
**[[6o7v]], [[6o7w]], [[6o7x]] - yATPS subunit A,B,C,C’,C’’,D,E,F,G,H + V0 assembly protein 1 – Cryo EM<br />
**[[6o7v]], [[6o7w]], [[6o7x]] - yATPS subunit A,B,C,C’,C’’,D,E,F,G,H + V0 assembly protein 1 – Cryo EM<br />
Line 246: Line 224:
**[[5d80]] - yATPS subunit A,B,D,E,F,G,H<br />
**[[5d80]] - yATPS subunit A,B,D,E,F,G,H<br />
**[[3a5c]], [[3a5d]] - TtATPS subunit A,B,D,F<br />
**[[3a5c]], [[3a5d]] - TtATPS subunit A,B,D,F<br />
**[[6ly8]] - TtATPS subunit A,B,D,F + ADP - Cryo-EM<br />
**[[6ly9]] - TtATPS subunit C,E,I,K - Cryo-EM<br />
**[[5tsj]] - TtATPS subunit A,B,C,D,E,F,G + antibody - Cryo-EM<br />
**[[5tsj]] - TtATPS subunit A,B,C,D,E,F,G + antibody - Cryo-EM<br />
**[[5gas]], [[5gar]] - TtATPS subunit A,B,C,D,E,F,G,I - Cryo-EM<br />
**[[5gas]], [[5gar]] - TtATPS subunit A,B,C,D,E,F,G,I - Cryo-EM<br />
Line 253: Line 233:
**[[5zea]] - EhATPS subunit A,B (mutant)<br />
**[[5zea]] - EhATPS subunit A,B (mutant)<br />
**[[5ze9]] - EhATPS subunit A,B (mutant) + AMPPNP<br />
**[[5ze9]] - EhATPS subunit A,B (mutant) + AMPPNP<br />
**[[5knd]], [[5knc]], [[5knb]] - EhATPS subunit A,B,D,F<br />
**[[5knd]], [[5knc]], [[5knb]] - EhATPS subunit A,B,D,F<br />


*'''P-ATPase'''
P-ATPase


*''Cu+2 transporting ATPase''
*''Cu+2 transporting ATPase''
Line 279: Line 258:
**[[3voy]], [[3j08]], [[3j09]] - AfATPase – Archaeoglobus fulgidus – CryoEM<br />
**[[3voy]], [[3j08]], [[3j09]] - AfATPase – Archaeoglobus fulgidus – CryoEM<br />
**[[3skx]], [[3sky]] - AfATPase NBD<br />
**[[3skx]], [[3sky]] - AfATPase NBD<br />
**[[3a1c]] – AfATPase + AMPPCP<br />
**[[3a1c]] – AfATPase NBD + AMPPCP<br />
**[[3a1d]] - AfATPase + ADP-Mg<br / >
**[[3a1d]] - AfATPase NBD + ADP-Mg<br / >
**[[3a1e]] - AfATPase (mutant) + AMPPCP<br />
**[[3a1e]] - AfATPase NBD (mutant) + AMPPCP<br />  
**[[2rml]] - BsATPase N-terminal – ''Bacillus subtilis'' – NMR<br />
**[[2rml]] - BsATPase N-terminal – ''Bacillus subtilis'' – NMR<br />
**[[2gcf]] - syATPase N-terminal - ''Synechocystis'' – NMR<br />
**[[2gcf]] - syATPase N-terminal - Synechocystis – NMR<br />
**[[4a4j]] - syATPase N-terminal <br />
**[[4a4j]] - syATPase N-terminal <br />
**[[4a48]] - syATPase<br />
**[[4a48]] - syATPase<br />
Line 289: Line 268:
**[[2yj3]] - SsATPase catalytic domain (mutant)<br />
**[[2yj3]] - SsATPase catalytic domain (mutant)<br />
**[[2yj4]], [[2yj5]], [[2yj6]] - SsATPase catalytic domain (mutant) + nucleotide<br />
**[[2yj4]], [[2yj5]], [[2yj6]] - SsATPase catalytic domain (mutant) + nucleotide<br />
**[[3rfu]], [[4bbj]], [[4bev]], [[4byg]] – LpATPase – ''Legionella pneumophila''<br />
**[[3rfu]], [[4bbj]], [[4bev]], [[4byg]] – LpATPase – ''Legionella pneumophila''<br />
**[[4f2f]] - ATPase metal-binding domain – ''Streptococcus pneumonia''<br />
**[[4f2f]] - ATPase metal-binding domain – ''Streptococcus pneumonia''<br />


*''Na/K transporting ATPase''
*''Na/K transporting ATPase''


**[[3kdp]], [[3b8e]] – pATPase  – pig <br />
**[[3kdp]], [[3b8e]] – pATPase  <br />
**[[3n23]] – pATPase + ouabain<br />
**[[3n23]] – pATPase + ouabain<br />
**[[3wgv]], [[3wgu]] – pATPase + oligomycin<br />
**[[3wgv]], [[3wgu]] – pATPase + oligomycin<br />
Line 300: Line 279:
**[[1q3i]] - pATPase NBD<br />
**[[1q3i]] - pATPase NBD<br />
**[[4ret]], [[4res]], [[4hyt]], [[4hqj]] - pATPase subunits α,β,γ<br />
**[[4ret]], [[4res]], [[4hyt]], [[4hqj]] - pATPase subunits α,β,γ<br />
**[[7d91]], [[7ddf]], [[7ddj]] - pATPase subunits A,B + ion transport regulator <br />
**[[7d92]], [[7d93]], [[7d94]], [[7ddg]], [[7ddh]], [[7ddi]], [[7ddk]], [[7ddl]] - pATPase subunits A,B + ion transport regulator + inhibitor<br />
**[[4xe5]] - bATPase <br />
**[[4xe5]] - bATPase <br />
**[[1mo8]], [[1mo7]] - rATPase α-1<br />
**[[1mo8]], [[1mo7]] - rATPase α-1 <br />
**[[2zxe]] - ATPase subunits α,β + phospholemman-like protein – spiny dogfish<br />
**[[2zxe]] - ATPase subunits α,β + phospholemman-like protein – spiny dogfish
**[[2hc8]] – AfATPase CopA A domain<br />
**[[2hc8]] –AfATPase CopA A domain<br />
**[[2b8e]] - AfATPase CopA NBD<br />
**[[2b8e]] - AfATPase CopA NBD<br />
**[[3a3y]] - SaATPase+K+ouabain – ''Squalus acanthias''<br />
**[[3a3y]] - SaATPase+K+ouabain – ''Squalus acanthias''<br />
**[[2xze]] - SaATPase<br />
**[[2xze]] - SaATPase<br />
**[[5aw9]], [[5aw8]], [[5aw7]], [[5aw6]], [[5aw5]], [[5aw4]], [[5aw3]], [[5aw2]], **[[5aw1]], [[5aw0]], [[5avz]], [[5avy]], [[5avx]], [[5avw]], [[5avv]], [[5avu]], [[5avt]], [[5avs]], [[5avr]], [[5avq]] – SaATPase + phospholemman-like protein<br />
**[[5aw9]], [[5aw8]], [[5aw7]], [[5aw6]], [[5aw5]], [[5aw4]], [[5aw3]], [[5aw2]], [[5aw1]], [[5aw0]], [[5avz]], [[5avy]], [[5avx]], [[5avw]], [[5avv]], [[5avu]], [[5avt]], [[5avs]], [[5avr]], [[5avq]] – SaATPase + phospholemman-like protein<br />


*''Ca+2 transporting ATPase''
*''Ca+2 transporting ATPase''


**[[6a69]] - hATPase + neuroplastin – Cryo EM<br />
**[[6a69]] - hATPase + neuroplastin – Cryo EM<br />
**[[3fgo]] - raATPase+CPA+AMPPCP – rabbit<br />
**[[3fgo]] - rATPase+CPA+AMPPCP – rabbit<br />
**[[3b9r]], [[1xp5]] - raATPase+AlF4<br />
**[[3b9r]], [[1xp5]] - rATPase+AlF4<br />
**[[1wpg]] - raATPase+MgF4<br />
**[[1wpg]] - rATPase+MgF4<br />
**[[3w5b]] - raATPase+Mg<br />
**[[3w5b]] - rATPase+Mg<br />
**[[4h1w]], [[3w5a]] - raATPase+ sarcolipin<br />
**[[4h1w]], [[3w5a]] - rATPase+ sarcolipin<br />
**[[3w5c]], [[3w5d]], [[1iwo]] - raATPase<br />
**[[3w5c]], [[3w5d]], [[1iwo]] - rATPase<br />
**[[4bew]] - raATPase+ phosphate analog<br />
**[[4bew]] - rATPase+ phosphate analog<br />
**[[2zbe]], [[3b9b]] – raATPase+BeF3<br />
**[[2zbe]], [[3b9b]] – rATPase+BeF3<br />
**[[2zbf]] - raATPase+BeF3+TG<br />
**[[2zbf]] - rATPase+BeF3+TG<br />
**[[2zbg]] - raATPase+AlF4+TG<br />
**[[2zbg]] - rATPase+AlF4+TG<br />
**[[2zbd]], [[3ar8]] - raATPase+AlF4+nucleotide+Ca<br />
**[[2zbd]], [[3ar8]] - rATPase+AlF4+nucleotide+Ca<br />
**[[3ar9]] - raATPase+BeF3+nucleotide<br />
**[[3ar9]] - rATPase+BeF3+nucleotide<br />
**[[2dqs]], [[3ar2]], [[1vfp]], [[4xou]] - raATPase+AMPPCP<br />
**[[2dqs]], [[3ar2]], [[1vfp]], [[4xou]] - rATPase+AMPPCP<br />
**[[5a3r]]  - raATPase + BeF3 + AMPPCP<br />
**[[5a3r]]  - rATPase + BeF3 + AMPPCP<br />
**[[2c88]], [[2c8k]], [[3ar4]], [[3ar3]], [[3ar5]], [[3ar7]] - raATPase+nucleotide+TG<br />
**[[2c88]], [[2c8k]], [[3ar4]], [[3ar3]], [[3ar5]], [[3ar7]] - rATPase+nucleotide+TG<br />
**[[2ear]], [[2c8l]] - raATPase+TG<br />
**[[2ear]], [[2c8l]] - rATPase+TG<br />
**[[2agv]] - raATPase+TG+BHQ<br />
**[[2agv]] - rATPase+TG+BHQ<br />
**[[4ycl]] - raATPase+CPA<br />
**[[4ycl]] - rATPase+CPA<br />
**[[2eat]] - raATPase+CPA+GT<br />
**[[2eat]] - rATPase+CPA+GT<br />
**[[3ar6]] - raATPase+TNP-ADP+GT<br />
**[[3ar6]] - rATPase+TNP-ADP+GT<br />
**[[2eau]] - raATPase+CPA+curcumin<br />
**[[2eau]] - rATPase+CPA+curcumin<br />
**[[3ba6]] - raATPase phosphoenzyme intermediate<br />
**[[3ba6]] - rATPase phosphoenzyme intermediate<br />
**[[3fpb]] - raATPase+ATP+cyclopiazonic acid<br />
**[[3fpb]] - rATPase+ATP+cyclopiazonic acid<br />
**[[3fps]], [[2oa0]] - raATPase+ADP+cyclopiazonic acid<br />
**[[3fps]], [[2oa0]] - rATPase+ADP+cyclopiazonic acid<br />
**[[2o9j]] - raATPase+MgF4+cyclopiazonic acid<br />
**[[2o9j]] - rATPase+MgF4+cyclopiazonic acid<br />
**[[1kju]], [[3n5k]] - raATPase E2 state<br />
**[[1kju]], [[3n5k]] - rATPase E2 state<br />
**[[2c9m]] - raATPase Ca2E1 state<br />
**[[2c9m]] - rATPase Ca2E1 state<br />
**[[1t5s]], [[3n8g]] - raATPase Ca2E1 state+AMPPCP<br />
**[[1t5s]], [[3n8g]] - rATPase Ca2E1 state+AMPPCP<br />
**[[4nab]] - raATPase Ca2E1 state (mutant) +AMPPCP<br />
**[[4nab]] - rATPase Ca2E1 state (mutant) +AMPPCP<br />
**[[1t5t]] - raATPase Ca2E1 state+ADP+AlF4<br />
**[[1t5t]] - rATPase Ca2E1 state+ADP+AlF4<br />
**[[1su4]] - raATPase + Ca<br />
**[[1su4]] - rATPase +2Ca2<br />
**[[2by4]], [[2yfy]], [[3nal]], [[3nam]], [[3nan]], [[4uu1]], [[4uu0]], [[4j2t]], **[[5a3s]] - raATPase HNE2 state+thapsigargin derivative<br />
**[[2by4]], [[2yfy]], [[3nal]], [[3nam]], [[3nan]], [[4uu1]], [[4uu0]], **[[4j2t]], [[5a3s]] - rATPase HNE2 state+thapsigargin derivative<br />
**[[5a3q]] - raATPase + thapsigargin derivative + AMPPCP<br />
**[[5a3q]] - rATPase + thapsigargin derivative + AMPPCP<br />
**[[4ycn]], [[4ycm]]  - raATPase + macrolide<br />
**[[4ycn]], [[4ycm]]  - rATPase + macrolide<br />
**[[4y3u]]  - raATPase + phospholamban<br />
**[[4y3u]]  - rATPase + phospholamban<br />


*''Zn+2 transporting ATPase''
*''Zn+2 transporting ATPase''


**[[2ofg]], [[2ofh]] - sATPase N-terminal – NMR
**[[2ofg]], [[2ofh]] - sATPase N-terminal – NMR<br />
**[[4umw]], [[4umv]] - ATPase +Mg – Shigella sonni<br />
**[[4umw]], [[4umv]] - ATPase +Mg – Shigella sonni<br />


Line 361: Line 342:
**[[6jxk]] – pATPase + Rb<br />
**[[6jxk]] – pATPase + Rb<br />
**[[6jxi]], [[6jxj]] – pATPase (mutant) + Rb<br />
**[[6jxi]], [[6jxj]] – pATPase (mutant) + Rb<br />
**[[6hra]], [[6hrb]], [[7bgy]], [[7bh1]], [[7bh2]], [[7lc3]], [[7lc6]] – EcATPase – Cryo EM<br />
**[[2a00]], [[2a29]] - EcATPase NBD of KdpB+AMPPNP – NMR<br />
**[[2a00]], [[2a29]] - EcATPase NBD of KdpB+AMPPNP – NMR<br />
**[[1svj]], [[1u7q]] - EcATPase NBD of KdpB – NMR<br />
**[[1svj]], [[1u7q]] - EcATPase NBD of KdpB – NMR<br />
Line 373: Line 355:
**[[4xtr]] - yATPase GET3 + antibody + pep12p<br />
**[[4xtr]] - yATPase GET3 + antibody + pep12p<br />
**[[3sja]], [[3sjb]], [[3sjc]], [[3sjd]], [[3zs8]], [[3zs9]], [[3b2e]], [[3vlc]] - yATPase GET3 + GET1 cystolic domain<br />
**[[3sja]], [[3sjb]], [[3sjc]], [[3sjd]], [[3zs8]], [[3zs9]], [[3b2e]], [[3vlc]] - yATPase GET3 + GET1 cystolic domain<br />
**[[1ii0]], [[1ii9[]], [[1f48]] - EcATPase<br />
**[[1ii0]], [[1f48]], [[1ii9]] - EcATPase<br />
**[[1ihu]] – EcATPase+Mg+ADP+AlF3<br />
**[[1ihu]] – EcATPase+Mg+ADP+AlF3<br />
**[[3ibg]] - ATPase GET3 – ''Aspergillus fumigatus''
**[[3ibg]] - ATPase GET3 – ''Aspergillus fumigatus''<br />


*''H+ transporting ATPase''
*''H+ transporting ATPase''
Line 384: Line 366:
*''Na+ transporting ATPase''
*''Na+ transporting ATPase''


**[[2db4]], [[3aou]] - EhATPase subunit K – ''Enterococcus hirae''<br />
**[[2db4]], [[3aou]] - EhATPase subunit K <br />
**[[3aon]] - EhATPase subunits D,G<br />
**[[3aon]] - EhATPase subunits D,G<br />
**[[3vr2]] - EhATPase subunits A,B<br />
**[[3vr2]] - EhATPase subunits A,B<br />
Line 404: Line 386:
*''Arg/ornithine transporting ATPase''
*''Arg/ornithine transporting ATPase''


**[[1h8e]] – bATPase+ADP+AlF4+ADP+SO4<br />
**[[1h8e]] – bATPase+ADP+AlF4+ADP+SO4 <br />
**[[1h8h]] - bATPase+ AMPPNP<br />
**[[1h8h]] -bcATPase+ AMPPNP<br />
**[[1efr]] - bATPase+efrapeptin<br />
**[[1efr]] - bATPase+efrapeptin<br />
**[[3cf0]], [[3cf1]], [[3cf3]] – mATPase  NBD+ADP – mouse<br />
**[[3cf0]], [[3cf1]], [[3cf3]] – mATPase  NBD+ADP – mouse<br />
**[[3cf2]] - mATPase NBD+ADP+AMP-PNP<br />
**[[3cf2]] - mATPase NBD+ADP+AMP-PNP<br />
**[[1kmh]] - sATPase alpha subunit+tentoxin<br />
**[[1kmh]] - sATPase alpha subunit+tentoxin <br />
**[[3fks]] – yATPase <br />
**[[3fks]] – yATPase <br />
**[[3ea0]] – ATPase ParA, fragment – ''Chlorobium tepidum''<br />
**[[3ea0]] – ATPase ParA, fragment – ''Chlorobium tepidum''<br />
**[[2qen]] – ATPase (mutant) Walker-type – ''Pyrococcus abyssi''<br />
**[[2qen]] – ATPase (mutant) Walker-type – ''Pyrococcus abyssi''<br />
**[[2r31]], [[2p4x]] – PdATPase ATP12 <br />
**[[2r31]], [[2p4x]] – PdATPase ATP12 <br />
**[[2zd2]] – PdATPase (mutant) ATP12<br />
**[[2zd2]] – PdATPase (mutant) ATP12<br />
**[[1d8s]] – EcATPase F1<br />
**[[1d8s]] – EcATPase F1<br />
Line 427: Line 409:


**[[6k7g]], [[6k7h]], [[6k7i]], [[6k7j]], [[6k7k]], [[6k7l]], [[6k7m]], [[6k7n]]  – hATPase + cell cycle control protein – Cryo EM <br />
**[[6k7g]], [[6k7h]], [[6k7i]], [[6k7j]], [[6k7k]], [[6k7l]], [[6k7m]], [[6k7n]]  – hATPase + cell cycle control protein – Cryo EM <br />
**[[7lkp]] – hATPase – Cryo EM <br />
**[[6lkn]]  – hATPase (mutant) + cell cycle control protein <br />
**[[6lkn]]  – hATPase (mutant) + cell cycle control protein <br />
**[[6lcp]], [[6lcr]] – ATPase + cell cycle control protein – ''Chaetomium thermophilum'' - Cryo EM <br />
**[[7ky5]], [[7ky6]], [[7ky7]], [[7kya]], [[7kyc]] – yATPase + LEM3 – Cryo EM <br />
**[[7ky9]], [[7kyb]] – yATPase + LEM3 + ADP – Cryo EM <br />
**[[7ky8]] – yATPase + LEM3 + AMPPCP – Cryo EM <br />
**[[6lcp]], [[6lcr]] – ATPase + cell cycle control protein – Chaetomium thermophilum - Cryo EM <br />


*RNA-dependent ATPase
*RNA-dependent ATPase
Line 440: Line 426:
**[[3mwk]], [[3nbf]] – TtATPase N-terminal + 8-oxo-AMP<br />
**[[3mwk]], [[3nbf]] – TtATPase N-terminal + 8-oxo-AMP<br />
**[[3mwl]] - TtATPase N-terminal (mutant) + 8-oxoadenine<br />
**[[3mwl]] - TtATPase N-terminal (mutant) + 8-oxoadenine<br />
**[[3nej]] - TtATPase reca-like domain (mutant)
**[[3nej]] - TtATPase reca-like domain (mutant) <br />


* DNA-dependent ATPase
* DNA-dependent ATPase
Line 446: Line 432:
**[[5tnu]] - ATPase – ''Sulfolobus tokodaii''<br />
**[[5tnu]] - ATPase – ''Sulfolobus tokodaii''<br />
**[[6p4o]], [[6p4w]] - ATPase + endonuclease BAX1 – ''Sulfurisphaera tokodaii''<br />
**[[6p4o]], [[6p4w]] - ATPase + endonuclease BAX1 – ''Sulfurisphaera tokodaii''<br />
*ATP-dependent ATPase
**[[5txv]] – EcATPase subunit HSLU<br />
**[[5ji3]], [[5ji2]] – EcATPase subunits HSLU+HSLV<br />


*Proteasome-associated ATPase
*Proteasome-associated ATPase


**[[3kw6]] – hATPase 5<br />
**[[6epf]], [[6epe]], [[6epd]], [[6epc]] – rATPase 6 + proteasome – Cryo EM<br />
**[[3fp9]], [[3m9b]], [[3m9h]] – MtATPase intern domain<br />
**[[3fp9]], [[3m9b]], [[3m9h]] – MtATPase intern domain<br />
**[[3m91]], [[3m9d]] - MtATPase coiled coil domain + protein PUP<br />
**[[3m91]], [[3m9d]] - MtATPase coiled coil domain + protein PUP<br />
**[[5kzf]] – MtATPase residues 98-609<br />
**[[5kzf]] – MtATPase residues 98-609<br />
**[[5kwa]] – MtATPase residues 22-529<br />
**[[5kwa]] – MtATPase residues 22-529<br />
**[[6kww]] – ATPase subunit HsIU – Staphylococcus aureus<br />
**[[5txv]] – EcATPase subunit HslU<br />
**[[6pxk]], [[[6pxl]], [[6pxx]] – EcATPase subunit HsIU + ADP<br />
**[[5ji3]], [[5ji2]] – EcATPase subunits HslU+HslV<br />
**[[6pxi]] – EcATPase subunit HsIU+HsIV + ADP<br />
**[[2wfw]] – ATPase substrate recognition domain – Rhodococcus erythropolis<br />


*Transitional endoplasmic reticulum ATPase residues 1-806
*Transitional endoplasmic reticulum ATPase residues 1-806
Line 485: Line 470:
**[[3qq7]] - hTer-ATPase<br />
**[[3qq7]] - hTer-ATPase<br />
**[[3tiw]] - hTer-ATPase + E3 ubiquitin-protein ligase peptide
**[[3tiw]] - hTer-ATPase + E3 ubiquitin-protein ligase peptide
**[[5c1b]] - hTer-ATPase + UFD1--SHP peptide<br />
**[[5glf]] - hTer-ATPase + derlin-1 peptide<br />
**[[5glf]] - hTer-ATPase + derlin-1 peptide<br />
**[[5epp]] - hTer-ATPase + rhomboid-related protein 4 peptide<br />
**[[5epp]] - hTer-ATPase N + rhomboid-related protein 4 peptide<br />
**[[4kdl]], [[4kdi]] - hTer-ATPase + ubiquitin thioesterase OTU1<br />
**[[4kdl]], [[4kdi]] - hTer-ATPase + ubiquitin thioesterase OTU1<br />
**[[5b6c]] - hTer-ATPase N + ubiquitin fusion degradation protein<br />
**[[5b6c]] - hTer-ATPase + ubiquitin fusion degradation protein<br />
**[[5x4l]] - hTer-ATPase + UBX domain-containing protein<br />
**[[5x4l]] - hTer-ATPase + UBX domain-containing protein<br />
**[[5kiy]], [[5kiw]] - hTer-ATPase (mutant) + Selenoprotein S<br />
**[[1s3s]] - mTer-ATPase ND1 domain + P47 C terminal<br />
**[[1s3s]] - mTer-ATPase ND1 domain + P47 C terminal<br />
**[[4rv0]] - Ter-ATPase N terminal + nuclear protein localization protein – ''Drosophila melanogaster''<br />
**[[4rv0]] - Ter-ATPase N terminal + nuclear protein localization protein – Drosophila melanogaster<br />


*Sarcoplasmic/endoplasmic reticulum ATPase
* Sarcoplasmic/endoplasmic reticulum ATPase


**[[6jju]], [[5ztf]] – hATPase 2<br />
**[[6jju]], [[5ztf]], [[7bt2]] – hATPase 2<br />
**[[6lle]], [[6lly]], [[6ln5]], [[6ln6]], [[6ln7]], [[6ln8]], [[6ln9]] – hATPase 2 + AMPPCP – Cryo EM<br />
**[[5mpm]], [[6hxb]] – pATPase <br />
**[[5mpm]], [[6hxb]] – pATPase <br />
**[[5xa7]], [[5xa8]], [[5xa9]], [[5xaa]], [[5xab]] – rATPase <br />
**[[5xa7]], [[5xa8]], [[5xa9]], [[5xaa]], [[5xab]], [[6yso]] – rATPase <br />
**[[5zmw]] – rATPase (mutant) <br />
**[[5zmw]] – rATPase (mutant) <br />
**[[5ncq]] – rATPase + ATP derivative + carbazole derivative<br />
**[[5ncq]] – rATPase + ATP derivative + carbazole derivative<br />
**[[6hef]], [[6rb2]] – rATPase + CAAMPPCP<br />
**[[6hef]], [[6rb2]] – rATPase + AMPPCP<br />
**[[5zmv]] – rATPase (mutant) + thapsigargin<br />
**[[5zmv]] – rATPase (mutant) + thapsigargin<br />
**[[6yaa]] – rATPase + ATP derivative + inhibitor<br />
**[[6yaa]] – rATPase + ATP derivative + inhibitor<br />
Line 508: Line 492:
*LAO/AO transport system ATPase
*LAO/AO transport system ATPase


**[[3nxs]] – MsATPase + GDP<br />
**[[6cum]] – MsATPase <br />
**[[6cum]] – MsATPase <br />
**[[3nxs]] – MsATPase + GDP<br />


*DNA double-strand repair ATPase (Rad50)
*DNA double-strand repair ATPase (Rad50)
Line 523: Line 507:
**[[4ncj]] - PfRad50 NBD (mutant) + BeF3 + ADP<br />
**[[4ncj]] - PfRad50 NBD (mutant) + BeF3 + ADP<br />
**[[3qkt]] - PfRad50 NBD + AMPPNP<br />
**[[3qkt]] - PfRad50 NBD + AMPPNP<br />
**[[3qku]] - PfRad50 NBD + AMPPNP + MRE11
**[[3qku]] - PfRad50 NBD + AMPPNP + MRE11<br />


*MipZ ATPase
*MipZ ATPase


**[[2xit]], [[2xj4]] – CcMipZ – ''Caulobacter crescentus''<br />
**[[2xit]], [[2xj4]] – CcMipZ – ''Caulobacter crescentus''<br />
**[[2xj9]] – CcMipZ (mutant)
**[[2xj9]] – CcMipZ (mutant) <br />


*ATPase Rava
* ATPase Rava


**[[5fl2]], [[4upf]] – EcATPase LARA domain + lysine decarboxylase<br />
**[[5fl2]], [[4upf]] – EcATPase LARA domain + lysine decarboxylase<br />
**[[4upb]] – EcATPase + lysine decarboxylase – Cryo EM<br />
**[[4upb]], [[6q7l]], [[6q7m]] – EcATPase + lysine decarboxylase – Cryo EM<br />
**[[3nbx]] – EcATPase Rava + ADP<br />
**[[3nbx]] – EcATPase Rava + ADP<br />
**[[6sza]], [[6szb]] – EcATPase Rava + ADP – Cryo EM<br />
**[[6sza]], [[6szb]] – EcATPase Rava + ADP – Cryo EM<br />
Line 546: Line 530:
**[[6mdo]], [[6mdp]] – haATPase + SNAP-25 – Cryo EM<br />
**[[6mdo]], [[6mdp]] – haATPase + SNAP-25 – Cryo EM<br />


*The RuvBL1/RuvBL2 complex (ATPase)
* ATPase Invc


** [[Journal:JSB:1|RuvBL1/RuvBL2 complex (ATPase)]] - Structural and functional insights into a dodecameric molecular machine<ref >PMID: 21933716</ref><br />
**[[6sdx]] – ATPase – Salmonella enterica<br />


* ATPase Invc
* ATPase in ribosome
 
**[[6tmf]] – ATPase – Thermococcus celer<br />
 
* P5A-type ATPase


**[[6sdx]] – ATPase – ''Salmonella enterica''<br />
**[[6xmp]], [[6xmq]], [[6xms]], [[6xmt]], [[6xmu]] – yATPase – Cryo EM<br />


* ATPase in ribosome
* ATPase SpaL/MxiB


**[[6tmf]] – ATPase – ''Thermococcus celer''<br />
**[[6n6l]], [[6n6m]], [[6n70]], [[6n71]], [[6n72]], [[6n73]], [[6n75]], [[6n76]] – ATPase (mutant) – Shigella flexneri<br />


}}
}}
[[Category:Topic Page]]
[[Category:Topic Page]]

Revision as of 08:53, 26 April 2021

3D Structures of ATPase

ATPase 3D structures

Updated on 26-April-2021

(mutant)

    • 3i72, 3i73, 3ikj - TtATPS subunit A (mutant)
    • 4o1s - ATPS subunit A – Thermoplasma volcanium
    • 5bn5 – NeATPase + NEQ263 – Nanoarchaeum equitans
    • 5bn4 – NeATPase + NEQ263 + ANP
    • 5bn3 – NeATPase + NEQ263 + ADP
  • V-ATPase subunit B
    • 2c61 - MmATPS subunit B – Methanosarcina mazei
    • 2rkw, 3b2q, 3ssa, 3tgw, 3tiv - MmATPS subunit B (mutant)
    • 3dsr - MmATPS subunit B+ADP
    • 3eiu - MmATPS subunit B+ATP
  • V-ATPase subunit C
  • V-ATPase subunit D+F
    • 4rnd – yATPase subunit D+F
  • V-ATPase subunit E
    • 2kz9 – yATPase subunit E
    • 2dm9, 2dma, 4dt0 - PhATPS subunit E – Pyrococcus horikoshii
    • 2kk7 - MjATPS subunit E – Methanocaldococcus jannaschii
    • 3v6i – TtATPS subunit E + VAPC
  • V-ATPase subunit F
    • 4ix9 – yATP subunit F (mutant)
    • 2qai - ATPS subunit F – Pyrococcus furiosus
    • 2i4r - ATPS subunit F – Archaeoglobus fulgidus
    • 2ov6 - MmATPS subunit F - NMR
    • 2d00 - TtATPS subunit F
  • V-ATPase subunit G
    • 2k88 - yATPS subunit G residues 2-58 - NMR
    • 2kwy - yATPS subunit G residues 61-101 - NMR
  • V-ATPase subunit H
    • 1ho8 – yATPS subunit H
  • V-ATPase subunit K
    • 2bl2, 2cyd - EhATPS subunit K – Enterococcus hirae
  • V-ATPase subunit I
    • 3rrk – ATPS subunit I N terminal – Meiothermus ruber
    • V-ATPase multi subunits
    • 6wlw – hATPase – Cryo EM
    • 6wlz, 6wm2, 6wm3, 6wm4 – hATPase + ADP – Cryo EM
    • 6xbw, 6xby, 6zg7, 6zg8, 6zik, 6ziq, 6zit, 6ziu, 6zpo, 6zqm, 6zqn – bATPase – Cryo EM
    • 7khr – bATPase + antibiotics – Cryo EM
    • 6vq6, 6vq7, 6vq8 - raATPS subunit A,B,C,D,E,E2, F,G,K, S1 + effector + renin receptor – Cryo EM
    • 6vq9, 6vqa, 6vqb - raATPS subunit A,B,D,E,E2,G,H + effector – Cryo EM
    • 6vqc, 6vqg, 6vqh - raATPS subunit A,B,D,E2, F, S1 + renin receptor + RNase K – Cryo EM
    • 6vqi, 6vqj, 6vqk - raATPS subunit A,C1,E1,G – Cryo EM
    • 4dl0, 4efa - yATPase subunits C,G,E
    • 3w3a - yATPS subunit A,B,D,F
    • 5tj5 - yATPS subunit A,C,C’,C’’,D,E,F
    • 5voz, 5voy, 5vox - yATPS subunit A,C,C’,C’’,D,E,F,H – Cryo EM
    • 6c6l - yATPS subunit A,C,C’,C’’,D,E,F + V0 assembly protein 1
    • 6o7t, 6m0r, 6m0s - yATPS subunit A,C,C’,C’’,E + V0 assembly protein 1 – Cryo EM
    • 6o7u - yATPS subunit C,C’,C’’,D,E + V0 assembly protein 1 – Cryo EM
    • 6o7v, 6o7w, 6o7x - yATPS subunit A,B,C,C’,C’’,D,E,F,G,H + V0 assembly protein 1 – Cryo EM
    • 6pe4, 6pe5 - yATPS subunit A,C,C’,C’’,D,E + V0 assembly protein 1 + cation transporter – Cryo EM
    • 5bw9 - yATPS subunit A,B,D,E,G,H – Cryo EM
    • 5d80 - yATPS subunit A,B,D,E,F,G,H
    • 3a5c, 3a5d - TtATPS subunit A,B,D,F
    • 6ly8 - TtATPS subunit A,B,D,F + ADP - Cryo-EM
    • 6ly9 - TtATPS subunit C,E,I,K - Cryo-EM
    • 5tsj - TtATPS subunit A,B,C,D,E,F,G + antibody - Cryo-EM
    • 5gas, 5gar - TtATPS subunit A,B,C,D,E,F,G,I - Cryo-EM
    • 5y60. 5y5z, 5y5y, 5y5x, 6qum, 6r0w, 6r0y, 6r0z, 6r10 - TtATPS subunit A,B,C,D,E,F,I,K - Cryo-EM
    • 3gqb - TtATPS subunit A (mutant),B (mutant)
    • 3k5b - TtATPS subunit E (mutant)+C
    • 5zea - EhATPS subunit A,B (mutant)
    • 5ze9 - EhATPS subunit A,B (mutant) + AMPPNP
    • 5knd, 5knc, 5knb - EhATPS subunit A,B,D,F

P-ATPase

  • Cu+2 transporting ATPase
    • 2kmv, 2kmx, 2arf, 2koy – hATPase NBD – human – NMR
    • 2kij - hATPase actuator domain – NMR
    • 1yjr, 1yjt, 1yju, 1yjv - hATPase (mutant) 6th soluble domain – NMR
    • 1y3j, 1y3k - hATPase 5th soluble domain – NMR
    • 2ew9 - hATPase 5th+6th soluble domains – NMR
    • 1s6o, 1s6u, 2lqb - hATPase 2nd soluble domain – NMR
    • 1q8l - hATPase 2nd MBD – NMR
    • 1aw0, 2aw0 - hATPase 4th MBD – NMR
    • 1kvi, 1kvj - hATPase 1st MBD – NMR
    • 5t7l - hATPase 1st MBD + Cu transport protein
    • 2k1r - hATPase MBD+ ATOX1 – NMR
    • 2rop, 2g9o, 2ga7 - hATPase MBD – NMR
    • 1fvq, 1fvs - hATPase – NMR
    • 3cjk – hATPase + Cu transporting protein ATX1
    • 3dxs - AtATPase RAN1 MBD (mutant) – Arabidopsis thaliana
    • 5lbd – AtATPase PAA1 N-domain
    • 5lbk – AtATPase PAA2 N-domain
    • 3voy, 3j08, 3j09 - AfATPase – Archaeoglobus fulgidus – CryoEM
    • 3skx, 3sky - AfATPase NBD
    • 3a1c – AfATPase NBD + AMPPCP
    • 3a1d - AfATPase NBD + ADP-Mg
    • 3a1e - AfATPase NBD (mutant) + AMPPCP
    • 2rml - BsATPase N-terminal – Bacillus subtilis – NMR
    • 2gcf - syATPase N-terminal - Synechocystis – NMR
    • 4a4j - syATPase N-terminal
    • 4a48 - syATPase
    • 2iye - SsATPase catalytic domain – Sulfolobus solfataricus
    • 2yj3 - SsATPase catalytic domain (mutant)
    • 2yj4, 2yj5, 2yj6 - SsATPase catalytic domain (mutant) + nucleotide
**3rfu, 4bbj, 4bev, 4byg – LpATPase – Legionella pneumophila
    • 4f2f - ATPase metal-binding domain – Streptococcus pneumonia
  • Na/K transporting ATPase
  • Ca+2 transporting ATPase
  • Zn+2 transporting ATPase
    • 2ofg, 2ofh - sATPase N-terminal – NMR
    • 4umw, 4umv - ATPase +Mg – Shigella sonni
  • K+ transporting ATPase
  • As+ transporting ATPase
    • 3h84, 3idq, 3a36, 3a37 - yATPase GET3
    • 4pwx, 5bwk - yATPase GET3 + golgi to ER traffic protein + ubiquitin-like protein
    • 5bw8 - yATPase GET3 + golgi to ER traffic protein + ubiquitin-like protein + protein
    • 4xwo - yATPase GET3 + antibody + Sec22
    • 4xvu - yATPase GET3 + antibody + NYV1
    • 4xtr - yATPase GET3 + antibody + pep12p
    • 3sja, 3sjb, 3sjc, 3sjd, 3zs8, 3zs9, 3b2e, 3vlc - yATPase GET3 + GET1 cystolic domain
    • 1ii0, 1f48, 1ii9 - EcATPase
    • 1ihu – EcATPase+Mg+ADP+AlF3
    • 3ibg - ATPase GET3 – Aspergillus fumigatus
  • H+ transporting ATPase
    • 5ksd - AtATPase C terminal truncated
    • 1mhs - ATPase – Neurospora crassa
  • Na+ transporting ATPase
    • 2db4, 3aou - EhATPase subunit K
    • 3aon - EhATPase subunits D,G
    • 3vr2 - EhATPase subunits A,B
    • 3vr4, 3vr5 - EhATPase subunits A,B,D,G
    • 3vr3 - EhATPase subunits A,B + AMPPNP
    • 3vr6 - EhATPase subunits A,B,D,G + AMPPNP
    • 1yce - ATPase rotor ring – Ilyobacter tartaricus
  • H/K transporting ATPase
  • Mg+2 transporting ATPase
    • 3gwi – EcATPase P-1 NBD
  • Arg/ornithine transporting ATPase
    • 1h8e – bATPase+ADP+AlF4+ADP+SO4
    • 1h8h -bcATPase+ AMPPNP
    • 1efr - bATPase+efrapeptin
    • 3cf0, 3cf1, 3cf3 – mATPase NBD+ADP – mouse
    • 3cf2 - mATPase NBD+ADP+AMP-PNP
    • 1kmh - sATPase alpha subunit+tentoxin
    • 3fks – yATPase
    • 3ea0 – ATPase ParA, fragment – Chlorobium tepidum
    • 2qen – ATPase (mutant) Walker-type – Pyrococcus abyssi
**2r31, 2p4x – PdATPase ATP12
    • 2zd2 – PdATPase (mutant) ATP12
    • 1d8s – EcATPase F1
    • 1vdz – PhATPase subunit A – Pyrococcus horikoshii
    • 3md0 – MtATPase+GDP
  • Monosaccharide transporting ATPase
    • 5dte – AsATPase – Actinobacillus succinogenes
    • 4zjp – AsATPase + ribopyranose
  • Phospholipid transporting ATPase
    • 6k7g, 6k7h, 6k7i, 6k7j, 6k7k, 6k7l, 6k7m, 6k7n – hATPase + cell cycle control protein – Cryo EM
    • 7lkp – hATPase – Cryo EM
    • 6lkn – hATPase (mutant) + cell cycle control protein
    • 7ky5, 7ky6, 7ky7, 7kya, 7kyc – yATPase + LEM3 – Cryo EM
    • 7ky9, 7kyb – yATPase + LEM3 + ADP – Cryo EM
    • 7ky8 – yATPase + LEM3 + AMPPCP – Cryo EM
    • 6lcp, 6lcr – ATPase + cell cycle control protein – Chaetomium thermophilum - Cryo EM
  • RNA-dependent ATPase
    • 3eaq, 3i31, 3i32 – TtATPase fragment
    • 4kbg, 4kbf - TtATPase helicase core domain
    • 5mao - TtATPase RRM domain
    • 4i69, 4i68 - TtATPase RRM domain (mutant)
    • 4i67 - TtATPase RRM domain + RNA
    • 3mwj – TtATPase N-terminal (mutant)
    • 3mwk, 3nbf – TtATPase N-terminal + 8-oxo-AMP
    • 3mwl - TtATPase N-terminal (mutant) + 8-oxoadenine
    • 3nej - TtATPase reca-like domain (mutant)
  • DNA-dependent ATPase
    • 5tnu - ATPase – Sulfolobus tokodaii
    • 6p4o, 6p4w - ATPase + endonuclease BAX1 – Sulfurisphaera tokodaii
  • Proteasome-associated ATPase
    • 3fp9, 3m9b, 3m9h – MtATPase intern domain
    • 3m91, 3m9d - MtATPase coiled coil domain + protein PUP
    • 5kzf – MtATPase residues 98-609
    • 5kwa – MtATPase residues 22-529
    • 6kww – ATPase subunit HsIU – Staphylococcus aureus
    • 5txv – EcATPase subunit HslU
    • 6pxk, [[[6pxl|6pxl]], 6pxx – EcATPase subunit HsIU + ADP
    • 5ji3, 5ji2 – EcATPase subunits HslU+HslV
    • 6pxi – EcATPase subunit HsIU+HsIV + ADP
    • 2wfw – ATPase substrate recognition domain – Rhodococcus erythropolis
  • Transitional endoplasmic reticulum ATPase residues 1-806
  • Transitional endoplasmic reticulum ATPase residues 1-480
    • 3hu1, 3hu2, 3hu3 – hTer-ATPase + ATPGS
    • 4ko8, 4kln, 5dyg – hTer-ATPase (mutant) + ATPGS
    • 5dyi – hTer-ATPase + ADP
    • 4kod – hTer-ATPase (mutant) + ADP
    • 5kiy, 5kiw - hTer-ATPase (mutant) + Selenoprotein S
  • Transitional endoplasmic reticulum ATPase residues 1-200
    • 3qc8, 3qq8, 3qwz - hTer-ATPase + FAS-associated factor 1
    • 3qq7 - hTer-ATPase
    • 3tiw - hTer-ATPase + E3 ubiquitin-protein ligase peptide
    • 5glf - hTer-ATPase + derlin-1 peptide
    • 5epp - hTer-ATPase N + rhomboid-related protein 4 peptide
    • 4kdl, 4kdi - hTer-ATPase + ubiquitin thioesterase OTU1
    • 5b6c - hTer-ATPase + ubiquitin fusion degradation protein
    • 5x4l - hTer-ATPase + UBX domain-containing protein
    • 1s3s - mTer-ATPase ND1 domain + P47 C terminal
    • 4rv0 - Ter-ATPase N terminal + nuclear protein localization protein – Drosophila melanogaster
  • Sarcoplasmic/endoplasmic reticulum ATPase
  • LAO/AO transport system ATPase
    • 3nxs – MsATPase + GDP
    • 6cum – MsATPase
  • DNA double-strand repair ATPase (Rad50)
    • 3aux – MjRad50 – Methanocaldococcus jannaschii
    • 3auy - MjRad50 + ADP
    • 3av0 - MjRad50 + ATP
    • 5f3w - MjRad50 + MRE11 + ATPGS
    • 5dny - MjRad50 + MRE11 + DNA
    • 3qg5 – TmRad50 NBD + MRE11
    • 3qkr, 3qks, 3qf7 - PfRad50 NBD + MRE11 – Pyrococcus furiosus
    • 4nck, 4nci, 4nch - PfRad50 NBD (mutant)
    • 4ncj - PfRad50 NBD (mutant) + BeF3 + ADP
    • 3qkt - PfRad50 NBD + AMPPNP
    • 3qku - PfRad50 NBD + AMPPNP + MRE11
  • MipZ ATPase
    • 2xit, 2xj4 – CcMipZ – Caulobacter crescentus
    • 2xj9 – CcMipZ (mutant)
  • ATPase Rava
    • 5fl2, 4upf – EcATPase LARA domain + lysine decarboxylase
    • 4upb, 6q7l, 6q7m – EcATPase + lysine decarboxylase – Cryo EM
    • 3nbx – EcATPase Rava + ADP
    • 6sza, 6szb – EcATPase Rava + ADP – Cryo EM
  • FlaI ATPase
    • 4ihq, 4ii7 – ATPase (mutant) – Sulfolobus acidocaldarius
  • Vescicle-fusing ATPase
    • 6mdm, 6mdn – haATPase + SNAP-25 + syntaxin-1A + VAMP-2 + NSF attachment protein – hamster – Cryo EM
    • 6mdo, 6mdp – haATPase + SNAP-25 – Cryo EM
  • ATPase Invc
    • 6sdx – ATPase – Salmonella enterica
  • ATPase in ribosome
    • 6tmf – ATPase – Thermococcus celer
  • P5A-type ATPase
  • ATPase SpaL/MxiB

Proteopedia Page Contributors and Editors (what is this?)

Michal Harel, Joel L. Sussman, Openfox

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