ATPase 3D structures: Difference between revisions
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**[[6f5d]] - F1-ATPS + ribonucleoprotein P18 – Trypanosoma brucei<br /> | **[[6f5d]] - F1-ATPS + ribonucleoprotein P18 – Trypanosoma brucei<br /> | ||
**[[3j0j]] – TtATPS α,β,γ,δ,ε,ζ - Cryo EM<br /> | **[[3j0j]] – TtATPS α,β,γ,δ,ε,ζ - Cryo EM<br /> | ||
*''F1F0 ATPase multiple subunits'' | *''F1F0 ATPase multiple subunits'' | ||
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**[[2yj3]] - SsATPase catalytic domain (mutant)<br /> | **[[2yj3]] - SsATPase catalytic domain (mutant)<br /> | ||
**[[2yj4]], [[2yj5]], [[2yj6]] - SsATPase catalytic domain (mutant) + nucleotide<br /> | **[[2yj4]], [[2yj5]], [[2yj6]] - SsATPase catalytic domain (mutant) + nucleotide<br /> | ||
**[[3rfu]], [[4bbj]], [[4bev]], [[4byg]] – LpATPase – ''Legionella pneumophila''<br /> | |||
**[[4f2f]] - ATPase metal-binding domain – ''Streptococcus pneumonia''<br /> | **[[4f2f]] - ATPase metal-binding domain – ''Streptococcus pneumonia''<br /> | ||
| Line 332: | Line 331: | ||
**[[2ofg]], [[2ofh]] - sATPase N-terminal – NMR<br /> | **[[2ofg]], [[2ofh]] - sATPase N-terminal – NMR<br /> | ||
**[[4umw]], [[4umv]] - ATPase +Mg – Shigella sonni<br /> | **[[4umw]], [[4umv]] - ATPase +Mg – ''Shigella sonni''<br /> | ||
*''K+ transporting ATPase'' | *''K+ transporting ATPase'' | ||
Revision as of 09:00, 26 April 2021
3D Structures of ATPase
Updated on 26-April-2021
(mutant)
- V-ATPase subunit B
- V-ATPase subunit C
- 3v3c - ATPS subunit C - pea
- 2w5j - sATPS subunit C
- 1u7l, 3u2f, 3u2y, 3u32, 3ud0 - yATPS subunit C
- 1ijp, 1l6t – EcF1-ATPS subunit C (mutant) - NMR
- 1r5z, 1v9m - TtATPS subunit C – Thermus thermophilus
- 3lg8 - MtATPS subunit C C-terminal
- 2wie, 2xqs, 2xqt, 2xqu - ATPS subunit C – Arthrospira platensis
- 3zk1, 3zk2 - FcATPS subunit C
- 3v3c - ATPS subunit C - pea
- V-ATPase subunit D+F
- 4rnd – yATPase subunit D+F
- 4rnd – yATPase subunit D+F
- V-ATPase subunit E
- V-ATPase subunit F
- V-ATPase subunit G
- V-ATPase subunit H
- 1ho8 – yATPS subunit H
- 1ho8 – yATPS subunit H
- V-ATPase subunit K
- V-ATPase subunit I
- 3rrk – ATPS subunit I N terminal – Meiothermus ruber
- V-ATPase multi subunits
- 6wlw – hATPase – Cryo EM
- 6wlz, 6wm2, 6wm3, 6wm4 – hATPase + ADP – Cryo EM
- 6xbw, 6xby, 6zg7, 6zg8, 6zik, 6ziq, 6zit, 6ziu, 6zpo, 6zqm, 6zqn – bATPase – Cryo EM
- 7khr – bATPase + antibiotics – Cryo EM
- 6vq6, 6vq7, 6vq8 - raATPS subunit A,B,C,D,E,E2, F,G,K, S1 + effector + renin receptor – Cryo EM
- 6vq9, 6vqa, 6vqb - raATPS subunit A,B,D,E,E2,G,H + effector – Cryo EM
- 6vqc, 6vqg, 6vqh - raATPS subunit A,B,D,E2, F, S1 + renin receptor + RNase K – Cryo EM
- 6vqi, 6vqj, 6vqk - raATPS subunit A,C1,E1,G – Cryo EM
- 4dl0, 4efa - yATPase subunits C,G,E
- 3w3a - yATPS subunit A,B,D,F
- 5tj5 - yATPS subunit A,C,C’,C’’,D,E,F
- 5voz, 5voy, 5vox - yATPS subunit A,C,C’,C’’,D,E,F,H – Cryo EM
- 6c6l - yATPS subunit A,C,C’,C’’,D,E,F + V0 assembly protein 1
- 6o7t, 6m0r, 6m0s - yATPS subunit A,C,C’,C’’,E + V0 assembly protein 1 – Cryo EM
- 6o7u - yATPS subunit C,C’,C’’,D,E + V0 assembly protein 1 – Cryo EM
- 6o7v, 6o7w, 6o7x - yATPS subunit A,B,C,C’,C’’,D,E,F,G,H + V0 assembly protein 1 – Cryo EM
- 6pe4, 6pe5 - yATPS subunit A,C,C’,C’’,D,E + V0 assembly protein 1 + cation transporter – Cryo EM
- 5bw9 - yATPS subunit A,B,D,E,G,H – Cryo EM
- 5d80 - yATPS subunit A,B,D,E,F,G,H
- 3a5c, 3a5d - TtATPS subunit A,B,D,F
- 6ly8 - TtATPS subunit A,B,D,F + ADP - Cryo-EM
- 6ly9 - TtATPS subunit C,E,I,K - Cryo-EM
- 5tsj - TtATPS subunit A,B,C,D,E,F,G + antibody - Cryo-EM
- 5gas, 5gar - TtATPS subunit A,B,C,D,E,F,G,I - Cryo-EM
- 5y60. 5y5z, 5y5y, 5y5x, 6qum, 6r0w, 6r0y, 6r0z, 6r10 - TtATPS subunit A,B,C,D,E,F,I,K - Cryo-EM
- 3gqb - TtATPS subunit A (mutant),B (mutant)
- 3k5b - TtATPS subunit E (mutant)+C
- 5zea - EhATPS subunit A,B (mutant)
- 5ze9 - EhATPS subunit A,B (mutant) + AMPPNP
- 5knd, 5knc, 5knb - EhATPS subunit A,B,D,F
- 3rrk – ATPS subunit I N terminal – Meiothermus ruber
P-ATPase
- Cu+2 transporting ATPase
- 2kmv, 2kmx, 2arf, 2koy – hATPase NBD – human – NMR
- 2kij - hATPase actuator domain – NMR
- 1yjr, 1yjt, 1yju, 1yjv - hATPase (mutant) 6th soluble domain – NMR
- 1y3j, 1y3k - hATPase 5th soluble domain – NMR
- 2ew9 - hATPase 5th+6th soluble domains – NMR
- 1s6o, 1s6u, 2lqb - hATPase 2nd soluble domain – NMR
- 1q8l - hATPase 2nd MBD – NMR
- 1aw0, 2aw0 - hATPase 4th MBD – NMR
- 1kvi, 1kvj - hATPase 1st MBD – NMR
- 5t7l - hATPase 1st MBD + Cu transport protein
- 2k1r - hATPase MBD+ ATOX1 – NMR
- 2rop, 2g9o, 2ga7 - hATPase MBD – NMR
- 1fvq, 1fvs - hATPase – NMR
- 3cjk – hATPase + Cu transporting protein ATX1
- 3dxs - AtATPase RAN1 MBD (mutant) – Arabidopsis thaliana
- 5lbd – AtATPase PAA1 N-domain
- 5lbk – AtATPase PAA2 N-domain
- 3voy, 3j08, 3j09 - AfATPase – Archaeoglobus fulgidus – CryoEM
- 3skx, 3sky - AfATPase NBD
- 3a1c – AfATPase NBD + AMPPCP
- 3a1d - AfATPase NBD + ADP-Mg
- 3a1e - AfATPase NBD (mutant) + AMPPCP
- 2rml - BsATPase N-terminal – Bacillus subtilis – NMR
- 2gcf - syATPase N-terminal - Synechocystis – NMR
- 4a4j - syATPase N-terminal
- 4a48 - syATPase
- 2iye - SsATPase catalytic domain – Sulfolobus solfataricus
- 2yj3 - SsATPase catalytic domain (mutant)
- 2yj4, 2yj5, 2yj6 - SsATPase catalytic domain (mutant) + nucleotide
- 3rfu, 4bbj, 4bev, 4byg – LpATPase – Legionella pneumophila
- 4f2f - ATPase metal-binding domain – Streptococcus pneumonia
- 2kmv, 2kmx, 2arf, 2koy – hATPase NBD – human – NMR
- Na/K transporting ATPase
- 3kdp, 3b8e – pATPase
- 3n23 – pATPase + ouabain
- 3wgv, 3wgu – pATPase + oligomycin
- 3b8e - pATPase a+BeF3
- 1q3i - pATPase NBD
- 4ret, 4res, 4hyt, 4hqj - pATPase subunits α,β,γ
- 7d91, 7ddf, 7ddj - pATPase subunits A,B + ion transport regulator
- 7d92, 7d93, 7d94, 7ddg, 7ddh, 7ddi, 7ddk, 7ddl - pATPase subunits A,B + ion transport regulator + inhibitor
- 4xe5 - bATPase
- 1mo8, 1mo7 - rATPase α-1
- 2zxe - ATPase subunits α,β + phospholemman-like protein – spiny dogfish
- 2hc8 –AfATPase CopA A domain
- 2b8e - AfATPase CopA NBD
- 3a3y - SaATPase+K+ouabain – Squalus acanthias
- 2xze - SaATPase
- 5aw9, 5aw8, 5aw7, 5aw6, 5aw5, 5aw4, 5aw3, 5aw2, 5aw1, 5aw0, 5avz, 5avy, 5avx, 5avw, 5avv, 5avu, 5avt, 5avs, 5avr, 5avq – SaATPase + phospholemman-like protein
- 3kdp, 3b8e – pATPase
- Ca+2 transporting ATPase
- 6a69 - hATPase + neuroplastin – Cryo EM
- 3fgo - rATPase+CPA+AMPPCP – rabbit
- 3b9r, 1xp5 - rATPase+AlF4
- 1wpg - rATPase+MgF4
- 3w5b - rATPase+Mg
- 4h1w, 3w5a - rATPase+ sarcolipin
- 3w5c, 3w5d, 1iwo - rATPase
- 4bew - rATPase+ phosphate analog
- 2zbe, 3b9b – rATPase+BeF3
- 2zbf - rATPase+BeF3+TG
- 2zbg - rATPase+AlF4+TG
- 2zbd, 3ar8 - rATPase+AlF4+nucleotide+Ca
- 3ar9 - rATPase+BeF3+nucleotide
- 2dqs, 3ar2, 1vfp, 4xou - rATPase+AMPPCP
- 5a3r - rATPase + BeF3 + AMPPCP
- 2c88, 2c8k, 3ar4, 3ar3, 3ar5, 3ar7 - rATPase+nucleotide+TG
- 2ear, 2c8l - rATPase+TG
- 2agv - rATPase+TG+BHQ
- 4ycl - rATPase+CPA
- 2eat - rATPase+CPA+GT
- 3ar6 - rATPase+TNP-ADP+GT
- 2eau - rATPase+CPA+curcumin
- 3ba6 - rATPase phosphoenzyme intermediate
- 3fpb - rATPase+ATP+cyclopiazonic acid
- 3fps, 2oa0 - rATPase+ADP+cyclopiazonic acid
- 2o9j - rATPase+MgF4+cyclopiazonic acid
- 1kju, 3n5k - rATPase E2 state
- 2c9m - rATPase Ca2E1 state
- 1t5s, 3n8g - rATPase Ca2E1 state+AMPPCP
- 4nab - rATPase Ca2E1 state (mutant) +AMPPCP
- 1t5t - rATPase Ca2E1 state+ADP+AlF4
- 1su4 - rATPase +2Ca2
- 2by4, 2yfy, 3nal, 3nam, 3nan, 4uu1, 4uu0, **4j2t, 5a3s - rATPase HNE2 state+thapsigargin derivative
- 5a3q - rATPase + thapsigargin derivative + AMPPCP
- 4ycn, 4ycm - rATPase + macrolide
- 4y3u - rATPase + phospholamban
- 6a69 - hATPase + neuroplastin – Cryo EM
- Zn+2 transporting ATPase
- K+ transporting ATPase
- 2ynr, 4ux2, 4ux1, 5y0b – pATPase – Cryo EM
- 5ylv – pATPase + pyridine derivative
- 5ylu – pATPase + vonoprazan
- 6jxh – pATPase (mutant) + K
- 6jxk – pATPase + Rb
- 6jxi, 6jxj – pATPase (mutant) + Rb
- 6hra, 6hrb, 7bgy, 7bh1, 7bh2, 7lc3, 7lc6 – EcATPase – Cryo EM
- 2a00, 2a29 - EcATPase NBD of KdpB+AMPPNP – NMR
- 1svj, 1u7q - EcATPase NBD of KdpB – NMR
- 2ynr, 4ux2, 4ux1, 5y0b – pATPase – Cryo EM
- As+ transporting ATPase
- 3h84, 3idq, 3a36, 3a37 - yATPase GET3
- 4pwx, 5bwk - yATPase GET3 + golgi to ER traffic protein + ubiquitin-like protein
- 5bw8 - yATPase GET3 + golgi to ER traffic protein + ubiquitin-like protein + protein
- 4xwo - yATPase GET3 + antibody + Sec22
- 4xvu - yATPase GET3 + antibody + NYV1
- 4xtr - yATPase GET3 + antibody + pep12p
- 3sja, 3sjb, 3sjc, 3sjd, 3zs8, 3zs9, 3b2e, 3vlc - yATPase GET3 + GET1 cystolic domain
- 1ii0, 1f48, 1ii9 - EcATPase
- 1ihu – EcATPase+Mg+ADP+AlF3
- 3ibg - ATPase GET3 – Aspergillus fumigatus
- 3h84, 3idq, 3a36, 3a37 - yATPase GET3
- H+ transporting ATPase
- Na+ transporting ATPase
- H/K transporting ATPase
- Mg+2 transporting ATPase
- 3gwi – EcATPase P-1 NBD
- Arg/ornithine transporting ATPase
- 1h8e – bATPase+ADP+AlF4+ADP+SO4
- 1h8h -bcATPase+ AMPPNP
- 1efr - bATPase+efrapeptin
- 3cf0, 3cf1, 3cf3 – mATPase NBD+ADP – mouse
- 3cf2 - mATPase NBD+ADP+AMP-PNP
- 1kmh - sATPase alpha subunit+tentoxin
- 3fks – yATPase
- 3ea0 – ATPase ParA, fragment – Chlorobium tepidum
- 2qen – ATPase (mutant) Walker-type – Pyrococcus abyssi
- 1h8e – bATPase+ADP+AlF4+ADP+SO4
**2r31, 2p4x – PdATPase ATP12
- Monosaccharide transporting ATPase
- Phospholipid transporting ATPase
- 6k7g, 6k7h, 6k7i, 6k7j, 6k7k, 6k7l, 6k7m, 6k7n – hATPase + cell cycle control protein – Cryo EM
- 7lkp – hATPase – Cryo EM
- 6lkn – hATPase (mutant) + cell cycle control protein
- 7ky5, 7ky6, 7ky7, 7kya, 7kyc – yATPase + LEM3 – Cryo EM
- 7ky9, 7kyb – yATPase + LEM3 + ADP – Cryo EM
- 7ky8 – yATPase + LEM3 + AMPPCP – Cryo EM
- 6lcp, 6lcr – ATPase + cell cycle control protein – Chaetomium thermophilum - Cryo EM
- 6k7g, 6k7h, 6k7i, 6k7j, 6k7k, 6k7l, 6k7m, 6k7n – hATPase + cell cycle control protein – Cryo EM
- RNA-dependent ATPase
- 3eaq, 3i31, 3i32 – TtATPase fragment
- 4kbg, 4kbf - TtATPase helicase core domain
- 5mao - TtATPase RRM domain
- 4i69, 4i68 - TtATPase RRM domain (mutant)
- 4i67 - TtATPase RRM domain + RNA
- 3mwj – TtATPase N-terminal (mutant)
- 3mwk, 3nbf – TtATPase N-terminal + 8-oxo-AMP
- 3mwl - TtATPase N-terminal (mutant) + 8-oxoadenine
- 3nej - TtATPase reca-like domain (mutant)
- 3eaq, 3i31, 3i32 – TtATPase fragment
- DNA-dependent ATPase
- Proteasome-associated ATPase
- 3fp9, 3m9b, 3m9h – MtATPase intern domain
- 3m91, 3m9d - MtATPase coiled coil domain + protein PUP
- 5kzf – MtATPase residues 98-609
- 5kwa – MtATPase residues 22-529
- 6kww – ATPase subunit HsIU – Staphylococcus aureus
- 5txv – EcATPase subunit HslU
- 6pxk, [[[6pxl|6pxl]], 6pxx – EcATPase subunit HsIU + ADP
- 5ji3, 5ji2 – EcATPase subunits HslU+HslV
- 6pxi – EcATPase subunit HsIU+HsIV + ADP
- 2wfw – ATPase substrate recognition domain – Rhodococcus erythropolis
- 3fp9, 3m9b, 3m9h – MtATPase intern domain
- Transitional endoplasmic reticulum ATPase residues 1-806
- 5c19 – hTer-ATPase (mutant)
- 5ftn, 5ftm, 5ftl, 5ftk, 5ftj – hTer-ATPase + ATPGS
- 5c18 – hTer-ATPase (mutant) + ATPGS
- 5c1b - hTer-ATPase + UFD1--SHP peptide
- 5ifw, 5ifs - hTer-ATPase + tether containing UBX domain
- 6mck - hTer-ATPase + inhibitor
- 6hd0 - hTer-ATPase + PUX1 + ADP
- 6g2v, 6g2w, 6g2x, 6g2y, 6g2z, 6g30 - hTer-ATPase D2 domain 462-764 + ADP
- 5c19 – hTer-ATPase (mutant)
- Transitional endoplasmic reticulum ATPase residues 1-480
- Transitional endoplasmic reticulum ATPase residues 1-200
- 3qc8, 3qq8, 3qwz - hTer-ATPase + FAS-associated factor 1
- 3qq7 - hTer-ATPase
- 3tiw - hTer-ATPase + E3 ubiquitin-protein ligase peptide
- 5glf - hTer-ATPase + derlin-1 peptide
- 5epp - hTer-ATPase N + rhomboid-related protein 4 peptide
- 4kdl, 4kdi - hTer-ATPase + ubiquitin thioesterase OTU1
- 5b6c - hTer-ATPase + ubiquitin fusion degradation protein
- 5x4l - hTer-ATPase + UBX domain-containing protein
- 1s3s - mTer-ATPase ND1 domain + P47 C terminal
- 4rv0 - Ter-ATPase N terminal + nuclear protein localization protein – Drosophila melanogaster
- 3qc8, 3qq8, 3qwz - hTer-ATPase + FAS-associated factor 1
- Sarcoplasmic/endoplasmic reticulum ATPase
- 6jju, 5ztf, 7bt2 – hATPase 2
- 6lle, 6lly, 6ln5, 6ln6, 6ln7, 6ln8, 6ln9 – hATPase 2 + AMPPCP – Cryo EM
- 5mpm, 6hxb – pATPase
- 5xa7, 5xa8, 5xa9, 5xaa, 5xab, 6yso – rATPase
- 5zmw – rATPase (mutant)
- 5ncq – rATPase + ATP derivative + carbazole derivative
- 6hef, 6rb2 – rATPase + AMPPCP
- 5zmv – rATPase (mutant) + thapsigargin
- 6yaa – rATPase + ATP derivative + inhibitor
- 6jju, 5ztf, 7bt2 – hATPase 2
- LAO/AO transport system ATPase
- DNA double-strand repair ATPase (Rad50)
- 3aux – MjRad50 – Methanocaldococcus jannaschii
- 3auy - MjRad50 + ADP
- 3av0 - MjRad50 + ATP
- 5f3w - MjRad50 + MRE11 + ATPGS
- 5dny - MjRad50 + MRE11 + DNA
- 3qg5 – TmRad50 NBD + MRE11
- 3qkr, 3qks, 3qf7 - PfRad50 NBD + MRE11 – Pyrococcus furiosus
- 4nck, 4nci, 4nch - PfRad50 NBD (mutant)
- 4ncj - PfRad50 NBD (mutant) + BeF3 + ADP
- 3qkt - PfRad50 NBD + AMPPNP
- 3qku - PfRad50 NBD + AMPPNP + MRE11
- 3aux – MjRad50 – Methanocaldococcus jannaschii
- MipZ ATPase
- ATPase Rava
- FlaI ATPase
- Vescicle-fusing ATPase
- ATPase Invc
- 6sdx – ATPase – Salmonella enterica
- 6sdx – ATPase – Salmonella enterica
- ATPase in ribosome
- 6tmf – ATPase – Thermococcus celer
- 6tmf – ATPase – Thermococcus celer
- P5A-type ATPase
- ATPase SpaL/MxiB