Cytochrome C 3D structures

3D structures of cytochrome C

Updated on 20-June-2021

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• Cytochrome C
  • 3zcf – hCyt - human
    
  • 3nwv, 3zoo, 5ty3, 5o10, 5exq, 6ecj – hCyt (mutant)
    
  • 3zcf – hCyt
    
  • 1j3s – hCyt - NMR
    
  • 3nbs, 3nbt, 1crc, 1hrc, 3o1y, 3o20, 3wc8, 3wui, 4rsz, 6k9i, 6k9j – hoCyt – horse
    
  • 5zkv - hoCyt (mutant)
    
  • 1lc1, 1lc2, 1m60, 1giw, 2giw, 1akk, 2frc, 1ocd – hoCyt – NMR
    
  • 2b4z, 6ff5 – bCyt – bovine
    
  • 5dfs – Cyt – spider monkey
    
  • 5c0z – rCyt – rat
    
  • 5df5, 5c9m – rCyt (mutant)
    
  • 2aiu – Cyt – mouse
    
  • 1lfm, 1i55, 3cyt, 1i54, 1i5t - Cyt – tuna
    
  • 5cyt – Cyt - albacore
    
  • 1crg, 1crh, 1cri, 1crj, 2ycc - yCyt - yeast
    
  • 1ytc, 1cie, 1cif, 1cig, 1cih, 1csu, 1csv, 1csw, 1csx, 1chh, 1chi, 1chj, 1cty, 1ctz - yCyt (mutant)
    
  • 2orl - yCyt (mutant) – NMR
    
  • 1rap, 1raq, 1ycc, 6rsk, 6rsl - yCyt iso-1
    
  • 1irv, 1irw, 1lms, 4mu8, 4n0k, 6gda, 6gd9, 6gd8, 6gd7, 6gd6, 5t7h, 5kke, 4qao, 4q5p – yCyt iso-1 (mutant)
    
  • 1yic – yCyt iso-1 – NMR
    
  • 2hv4, 2lir, 2lit, 2mhm - yCyt iso-1 (mutant) - NMR
    
  • 1yea, 1yeb – yCyt iso-2
    
  • 2e84 – DvCyt – Desulfovibrio vulgaris
    
  • 2oz1 – RsuCyt – Rhodovulum sulfidophilum
    
  • 1h31, 1h32, 1h33 – RsuCyt diheme
    
  • 2fw5, 2fwt – RsCyt diheme residues 1-139 - Rhodobacter sphaeroides
    
  • 1dw0, 1dw3 - RsCyt diheme residues 1-112
    
  • 2a3m, 2a3p – DdCyt tetraheme membrane-bound subunit - Desulfovibrio desulfuricans
    
  • 1h21 - DdCyt di-heme
    
  • 1ofw, 1ofy, 1duw, 19hc - DdCyt nine-heme
    
  • 1oah - DdCyt
    
  • 1dxr – RvCyt in photosynthetic reaction center – Rhodopseudomonas viridis
    
  • 1qdb – Cyt – Sulfurospirillum deleyianum
    
  • 2ccy – Cyt – Phaeospirillum molischianum
    
  • 4dy9 – Cyt – Leishmania major
    
  • 3u99 – Cyt diheme – Shewanella baltica
    
  • 3a9f – CtCyt C-terminal – Chlorobaculum tepidum
    
  • 3cp5 – Cyt residues 29-152 – Rhodothermus marinus
    
  • 6cun, 6cuk - RmCyt (mutant)
    
  • 6hih – Cyt β – Methylococcus capsulatus
    
  • 6c4w – Cyt – Pichia membranifaciens
    
  • 5lo9 – Cyt – Marichromatium purpuratum
    
  • 6tk0 – TpCyt – Thioalkalivibrio paradoxus
    
• Cytochrome C complex
  • 1fi9, 1fi7 - hoCyt + imidazole – NMR
    
  • 1u75 - hoCyt + Cyt peroxidase
    
  • 1wej – hoCyt + Fab fragment
    
  • 5wve - hoCyt + APAF-1 + caspase-9 – Cryo EM
    
  • 6suv - hoCyt + calixarine
    
  • 5juy - bCyt + APAF-1 + caspase-9 – Cryo EM
    
  • 3j2t – bCyt + apoptotic protease-activating factor 1 – Cryo EM
    
  • 2jti, 3tyi – yCyt (mutant) + Cyt peroxidase – yeast
    
  • 2pcb - yCyt + Cyt peroxidase
    
  • 2gb8 - yCyt + Cyt peroxidase - NMR
    
  • 2jqr - yCyt (mutant) + adrenodoxin
    
  • 1fhb - yCyt iso-1 (mutant) + CN - NMR
    
  • 1nmi – yCyt iso-1 + imidazole
    
  • 2b0z, 2b10, 2b11, 2b12, 1u74, 1s6v, 2bcn – yCyt iso-1 (mutant) + Cyt peroxidase
    
  • 5lft, 5kpf, 6suy – yCyt iso-1 + pegylated calix arene derivative
    
  • 6egz, 6egy, 5ncv, 5lyc, 4ye1, 6y0j – yCyt iso-1 (mutant) + pegylated calix arene derivative
    
  • 5klu – yCyt iso-1 (mutant) + maltopyranoside
    
  • 2pcc, 6p41, 6p42 – yCyt iso-1 + Cyt peroxidase
    
  • 6p43 – yCyt iso-1 (mutant) + CytC peroxidase
    
  • 2j7a – DvCyt catalytic + electron donor subunits
    
  • 1dw1, 1dw2 - RsCyt diheme residues 1-112 + small molecule
    
  • 1ogy - RsCyt diheme residues 25-154 + nitrate reductase catalytic subunit
    
  • 1fs7, 1fs8, 1fs9 – WsCyt + small molecule – Wolinella succinogenes
    
  • 5n1t – TpCyt + sulfide dehydrogenase + Copc
    
• Cytochrome C’
  • 1cgn, 1cgo, 2ykz, 3zqv, 2yli, 4cda, 4cdv, 4cdy, 4cip, 4cjo, 4wgy, 4wgz - AxCyt - Achromobacter xylosoxidans
    
  • 2xm0, 2xm4, 2xl8, 2xlh, 2yl0, 2yl7, 3ztm, 5jve, 5jt4, 5jsl, 5jp7 - AxCyt (mutant)
    
  • 2xlm, 4cjg - AxCyt + NO
    
  • 2xl6, 2xld, 2xle, 2xlo, 2xlv, 2xlw, 5ngx, 5nc0, 5jua, 5js5, 5jra, 5jli, 5agf, 4d4x, 4d4n – AxCyt (mutant) + NO
    
  • 2yld, 3zwi - AxCyt + CO
    
  • 2yl1, 2yl3, 2ylg, 3zqy, 3ztz - AxCyt (mutant) + CO
    
  • 2j9b, 2j8w – Cyt – Rubrivivax gelatinosus
    
  • 1gqa – RsCyt
    
  • 1mqv, 1a7v – RpCyt – Rhodopseudomonas palustris
    
  • 1eky – RcCyt]] - Rhodobacter capsulatus – NMR
    
  • 1cpr, 1cpq, 1rcp – RcCyt
    
  • 1nbb – RcCyt + cyanide
    
  • 1e83, 1e84, 1e85, 1e86 – Cyt - Alcaligenes xylosoxidans
    
  • 1jaf – Cyt – Rhodocyclus gelatinosus
    
  • 1bbh, 5gyr – Cyt – Allochromatium vinosum
    
  • 3vcr - CtCyt
    
  • 3vrc – Cyt – Thermochromatium tepidum
    
  • 4cx9 - SfCyt – Shewanella frigidimarina
    
  • 4ulv - SfCyt + NO
    
  • 6a3k – Cyt – Shewanella benthica
    
  • 6a3l – SvCyt – Shewanella violacea
    
  • 5b3i – Cyt – Hydrogenophilus thermoluteolus
    
  • 6hih – Cyt β – Methylococcus capsulatus
    
• Cytochrome C’’
  • 1oae, 1gu2 – MmCyt – Methylophilus methylotrophus
    
  • 1e8e – MmCyt - NMR
    
• Cytochrome C1
  • 6fo0 - bCyt in Bc1 complex – Cryo EM
    
  • 1l0n, 1be3, 1bgy, 1qcr– bCyt in Bc1 complex
    
  • 6fo6 - bCyt in Bc1 complex + antimalarial inhibitor – Cryo EM
    
  • 1p84, 1l0l, 6haw, 6xvf - bCyt in Bc1 complex + inhibitor
    
  • 2fyu - bCyt in Bc1 complex (mutant) + inhibitor
    
  • 1sqp, 1sqq, 1sqv, 1sqx, 2a06, 1sqb, 1pp9, 1ppj, 1ntk, 1ntm, 1ntz, 1nu1 - bCyt in Bc1 complex + substrate
    
  • 3h1h, 1bcc - cCyt in Bc1 complex – chicken
    
  • 3h1i, 2bcc, 3bcc - cCyt in Bc1 complex + inhibitor
    
  • 7jrp - Cyt in Bc1 complex – mung bean - Cryo EM
    
  • 1kyo, 3cx5, 3cxh – yCyt in Bc1 complex
    
  • 2ibz - yCyt in Bc1 complex + inhibitor
    
  • 6giq, 6hu9, 6t0b, 6t15, 6ymx, 6ymy - yCyt in Bc1 complex – Cryo EM
    
  • 1kb9 – yCyt in Bc1 complex residues 17-368
    
  • 1ezv - yCyt in Bc1 complex + antibody FV fragment
    
  • 6nhg, 6xkt, 6xku, 6xkw, 6xkx, 6xkz - RsCyt in Bc1 complex – Cryo EM
    
  • 2qjk, 2qjp, 2qjy – RsCyt in Bc1 complex + inhibitor
    
  • 2fyn - RsCyt in Bc1 complex (mutant)
    
  • 5kkz - RsCyt in Bc1 complex + Ubiquinol-CytC reductase + fungicide
    
  • 6nin - RsCyt in Bc1 complex + Ubiquinol-CytC reductase + stigmatellin
    
  • 5kli - RsCyt in Bc1 complex + Ubiquinol-CytC reductase + stigmatellin + antimycin
    
  • 1zrt - RcCyt in Bc1 complex + inhibitor
    
  • 2yiu - PdCyt in Bc1 complex – Paracoccus denitrificans
    
  • 4xxl – Cyt – Syderoxydans lithotrophicus
    
  • 6xi0, 6xkt - Cyt in Bc1 complex + Ubiquinol-CytC reductase – Rhodobacter capsulatus – Cryo EM
    
  • 6kls, 6klv - AaCyt in Bc1 complex + Rieske-I protein – Aquifex aeolicus – Cryo EM
    
• Cytochrome C2
  • 1c2r - RcCyt
    
  • 1vyd – RcCyt (mutant)
    
  • 1c2n – RcCyt - NMR
    
  • 1l9b, 1l9j – RsCyt in photosynthetic reaction center
    
  • 2cxb, 1cxc, 1cxa - RsCyt
    
  • 1jdl – Cyt – Rhodospirillum centenum
    
  • 2c2c, 3c2c – Cyt – Rhodospirillum rubrum
    
  • 1i8o, 1hh7, 1fj0, 1i8p – RpCyt
    
  • 1hro – Cyt – Rhodopila globiformis
    
  • 1cot – PdCyt
    
  • 1cry - RvCyt
    
  • 1co6, 1io3 – BvCyt - Blastochloris viridis
• Cytochrome C3
  • 2ksu, 1up9, 1upd, 1gmb, 1gm4, 1i77, 3cyr – DdCyt
    
  • 2kmy – DdCyt – NMR
    
  • 2k3v – Cyt – Shewanella frigidimarina
    
  • 1m1p, 1m1r, 1m1q - SoCyt tetraheme – Shewanella oneidensis
    
  • 3pmq - SoCyt decaheme
    
  • 1it1 – DvCyt
    
  • 2bpn – DvCyt fragment - NMR
    
  • 1j0o, 2cth, 2cdv - DvCyt tetraheme
    
  • 2z47, 2yyw, 2yyx, 2yxc, 2ffn, 2ewi, 2ewk, 2ewu, 1wr5, 1j0p, 1mdv, 2cym – DvCyt tetraheme (mutant)
    
  • 1gx7 – DvCyt + hydrogenase
    
  • 1gyo, 1wad, 1qn0, 1qn1 - DgCyt di-tetraheme – Desulfovibrio gigas
    
  • 1z1n - DgCyt sixteen heme
    
  • 2bq4, 3cao, 3car – Cyt – Desulfovibrio africanus
    
  • 1w7o - Cyt – Desulfomicrobium baculatus
    
  • 1aqe – DnCyt (mutant) – Desulfomicrobium norvegicum
    
  • 1czj, 2cy3 - DnCyt
    
  • 1a2i - DvCyt
    
  • 2ldo – GsCyt residues 21-91 – Geobacter sulfurreducens - NMR
    
  • 2izz - GsCyt residues 21-91 (mutant) – NMR
    
  • 3ov0 – GsCyt residues 26-343 dodedcaheme
    
  • 3ouq - GsCyt residues 26-186 hexaheme
    
  • 3oue - GsCyt residues 186-343 hexaheme
• Cytochrome C4
  • 1m6z, 1m70, 1etp – PsCyt – Pseudomonas stutzeri
    
  • 6q2u – PaCyt - Pseudomonas aeruginosa
    
  • 1h1o – Cyt - Acidithiobacillus ferrooxidans
• Cytochrome C5
  • 6k7c – SvCyt
    
  • 1cc5 – Cyt – Azotobacter vinelandii
• Cytochrome C6
  • 1ccr – Cyt - rice
    
  • 2v07, 2dge – AtCyt residues 71-175 – Arabidopsis thaliana
    
  • 2ce0, 2ce1 - AtCyt residues 71-175 (mutant)
    
  • 3ph2 – PlCyt (mutant) – Phormidium laminosum
    
  • 3dr0, 4eic, 4eie – SyCyt – Synechococcus
    
  • 4eid, 4eif – SyCyt (mutant)
    
  • 3dmi – Cyt – Phaeodactylum tricornutum
    
  • 2zbo – Cyt – Hizikia fusiformis
    
  • 2v08 – PlCyt
    
  • 1ls9 – Cyt – Cladophora glomerata
    
  • 1kib, 1f1f – AmCyt – Arthrospira maxima
    
  • 1gdv – Cyt – Porphyra yezoensis
    
  • 1a2s, 1ced – MbCyt – Monoraphidium braunii – NMR
    
  • 1ctj - MbCyt
    
  • 1c6s – Cyt – Cyanobacterium synechococcus - NMR
    
  • 1c6o, 1c6r – Cyt – Scenedesmus obliquus
    
  • 4gyd – noCyt – nostoc
    
  • 4h0j, 4h0k – noCyt (mutant)
    
  • 6tr1, 6tsy – TeCyt - Thermosynechococcus elongatus
    
• Cytochrome C7
  • 3h33, 3h34, 3h4n, 3bxu – GsCyt
    
  • 1lm2, 1l3o, 1kwj, 1f22, 1ehj – DaCyt – Deulfurmonas acetoxidans – NMR
    
  • 1hh5 - DaCyt
    
  • 3sel, 3sj0, 3sj1, 3sj4 – Cyt (mutant) – Geobascter desulfurreducens
    
• Cytochrome C549
  • 1f1c – AmCyt
    
  • 1e29 - SyCyt
• Cytochrome C550
  • 3wu2, 4v82, 3kzi, 3a0b, 3a0h, 4v62, 1izl, 5ws6, 5ws5, 5v2c, 5gti, 5gth, 5b66, 5b5e, 4ub8, 4ub6, 4il6 – Cyt in photosystem II – Thermosynechococcus vulcanus
    
  • 7d1t, 7d1u – TvCyt in photosystem II – Cyo EM
    
  • 2axt, 1w5c, 1s5l, 5h2f, 5tis, 5mx2, 5kai, 5kaf, 5e7c, 5e79, 4tnk, 4tnj, 4tni, 4tnh, 4rvy, 4pj0, 4pbu, 4ixr, 4ixq, 4fby - TeCyt in photosystem II – Thermosynechococcus elongatus
    
  • 2bgv – PvCyt – Paracoccus versutus
    
  • 2bh4, 2bh5 – PvCyt (mutant)
    
  • 1mz4 – TeCyt
    
  • 155c - PdCyt
• Cytochrome C551
  • 2zon – AxCyt + nitrite reductase
    
  • 2gc7, 2gc4, 2mta – PdCyt + methylamine dehydrogenase + amicyanin
    
  • 1cch, 1cor – PsCyt - NMR
    
  • 1gks – Cyt – Ectothiorhodospira halophila - NMR
    
  • 1new – DaCyt triheme]- NMR
    
  • 351c, 451c, 3x39 - PaCyt
    
  • 2exv – PaCyt (mutant)
    
  • 2pac – PaCyt - NMR
    
  • 1dvv - PaCyt (mutant) – NMR
    
  • 1fi3, 2i8f - PsCyt (mutant) – NMR
    
  • 5xec, 5xed – Cyt551/Cyt552 – Hydrogenobacter thermophilus
    
• Cytochrome C552 Nitrite reductase
• Cytochrome C553
  • 1b7v, 1c75 – BpCyt - Bacillus pasteuri
    
  • 1k3h, 1k3g – BpCyt – NMR
    
  • 1e08 – DdCyt + hydrogenase - NMR
    
  • 1n9c – Cyt – Sporosarcina pasteurii
    
  • 1c53 - DvCyt
    
  • 1dvh - DvCyt - NMR
    
  • 2dvh - DvCyt (mutant) - NMR
    
  • 1dwl – DvCyt + ferredoxin I – NMR
    
  • 1cyi, 1cyj – Cyt – Chlamydomonas reinhardtii
• Cytochrome C554
  • 2zzs – Cyt – Vibrio parahaemolyticus
    
  • 1ft5, 1ft6, 1bvb – Cyt – Nitrosomonas europaea
• Cytochrome C555
  • 2zxy – AaCyt
    
  • 2yk3 – Cyt – Crithidia fasciculate
    
  • 4j20 – CtCyt (mutant)
    
• Cytochrome C557
  • 1foc – TtCyt – Thermus thermophilus
    
• Cytochrome C556
  • 1s05 – RpCyt - NMR
    
• Cytochrome C558
  • 2x5u, 2x5v – BvCyt in photosynthetic reaction center – Blastochloris viridis – Laue
    
  • 2wjm, 2wjn, 3g7f, 3d38, 2jbl, 2i5n, 1vrn, 1r2c - BvCyt in photosynthetic reaction center
• Cytochrome C562
  • 3qvz – EcCyt + Cu + Zn
• Cytochrome C NAPB
  • 3ml1, 3o5a – Cyt + nitrate reductase catalytic subunit – Ralstonia eutropha
    
  • 1jni – Cyt small subunit – Haemophilus influenzae
• Cytochrome CL
  • 2d0w – Cyt – Hyphomicrobium denitrificans
    
  • 2c8s – MeCyt – Methylobacterium extorquens
    
  • 1mg2, 1mg3 – PdCyt + methylamine hydrogenase + amicyanin
    
• Cytochrome CC3
  • 2cvc, 1gws, 1h29 – DvCyt
• Cytochrome CD1
  • 1gq1, 1h9x, 1h9y, 1hcm, 1qks – Cyt – Paracoccus pantotrophus
    
  • 1gjq– PaCyt
    
  • 1dy7 – PaCyt + CO
    
  • 1e2r – PdCyt + CN
• Cytochrome CH
  • 1qn2 – MeCyt
• Cytochrome C xoxg
  • 6onq – MeCyt
    
• Cytochrome C omcs
  • 6ef8 – Cyt – Geobascter sulfurreducens
    
• Cytochrome CB562
  • 3qvy, 3qw0, 3qw1 – EcCyt + Zn
    
  • 3c62, 3c63, 3iq5, 3iq6, 3l1m, 3m15, 3nmi, 3nmk - EcCyt (mutant) + Zn
    
  • 3de8, 3m79 - EcCyt (mutant) + Zn + Cu
    
  • 3de9, 3nmj - EcCyt (mutant) + Zn + Ni

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