3fhp

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A neutron crystallographic analysis of a porcine 2Zn insulin at 2.0 A resolution

Structural highlights

3fhp is a 4 chain structure with sequence from Sus scrofa. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:Neutron Diffraction, Resolution 2Å
Ligands:DOD, ZN
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

INS_PIG Insulin decreases blood glucose concentration. It increases cell permeability to monosaccharides, amino acids and fatty acids. It accelerates glycolysis, the pentose phosphate cycle, and glycogen synthesis in liver.

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

Publication Abstract from PubMed

Neutron diffraction data for T(6) porcine insulin were collected to 2.1 A resolution from a single crystal partly deuterated by exchange of mother liquor. A maximum-likelihood structure refinement was undertaken using the neutron data and the structure was refined to a residual of 0.179. The hydrogen-bonding network of the central core of the hexamer was observed and the charge balance between positively charged Zn ions and their surrounding structure was interpreted by considering the protonation and/or deprotonation states and interactions of HisB10, water and GluB13. The observed double conformation of GluB13 was essential to interpreting the charge balance and could be compared with the structure of a dried crystal of T(6) human insulin at 100 K. Differences in the dynamic behaviour of the water molecules coordinating the upper and lower Zn ions were observed and interpreted. The hydrogen bonds in the insulin molecules, as well as those involving HisB10 and GluB13, are discussed. The hydrogen/deuterium (H/D) exchange ratios of the amide H atoms of T(6) porcine insulin in crystals were obtained and showed that regions highly protected from H/D exchange are concentrated in the centre of a helical region of the B chains. From the viewpoint of soaking time versus H/D-exchange ratios, the amide H atoms can be classified into three categories.

A neutron crystallographic analysis of T6 porcine insulin at 2.1 A resolution.,Iwai W, Yamada T, Kurihara K, Ohnishi Y, Kobayashi Y, Tanaka I, Takahashi H, Kuroki R, Tamada T, Niimura N Acta Crystallogr D Biol Crystallogr. 2009 Oct;65(Pt 10):1042-50. Epub 2009, Sep 16. PMID:19770501[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

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See Also

References

  1. Iwai W, Yamada T, Kurihara K, Ohnishi Y, Kobayashi Y, Tanaka I, Takahashi H, Kuroki R, Tamada T, Niimura N. A neutron crystallographic analysis of T6 porcine insulin at 2.1 A resolution. Acta Crystallogr D Biol Crystallogr. 2009 Oct;65(Pt 10):1042-50. Epub 2009, Sep 16. PMID:19770501 doi:10.1107/S090744490902770X

Contents


PDB ID 3fhp

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