3l4p

From Proteopedia

Jump to: navigation, search

Crystal structure of the Aldehyde Dehydrogenase (a.k.a. AOR or MOP) of Desulfovibrio gigas covalently bound to [AsO3]-

Structural highlights

3l4p is a 1 chain structure with sequence from Megalodesulfovibrio gigas. This structure supersedes the now removed PDB entry 1zcs. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.45Å
Ligands:AST, CA, CL, FES, IPA, LI, MG, PCD, URE
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

MOP_MEGGA

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

Publication Abstract from PubMed

Two arsenite-inhibited forms of each of the aldehyde oxidoreductases from Desulfovibrio gigas and Desulfovibrio desulfuricans have been studied by X-ray crystallography and electron paramagnetic resonance (EPR) spectroscopy. The molybdenum site of these enzymes shows a distorted square-pyramidal geometry in which two ligands, a hydroxyl/water molecule (the catalytic labile site) and a sulfido ligand, have been shown to be essential for catalysis. Arsenite addition to active as-prepared enzyme or to a reduced desulfo form yields two different species called A and B, respectively, which show different Mo(V) EPR signals. Both EPR signals show strong hyperfine and quadrupolar couplings with an arsenic nucleus, which suggests that arsenic interacts with molybdenum through an equatorial ligand. X-ray data of single crystals prepared from EPR-active samples show in both inhibited forms that the arsenic atom interacts with the molybdenum ion through an oxygen atom at the catalytic labile site and that the sulfido ligand is no longer present. EPR and X-ray data indicate that the main difference between both species is an equatorial ligand to molybdenum which was determined to be an oxo ligand in species A and a hydroxyl/water ligand in species B. The conclusion that the sulfido ligand is not essential to determine the EPR properties in both Mo-As complexes is achieved through EPR measurements on a substantial number of randomly oriented chemically reduced crystals immediately followed by X-ray studies on one of those crystals. EPR saturation studies show that the electron transfer pathway, which is essential for catalysis, is not modified upon inhibition.

Correlating EPR and X-ray structural analysis of arsenite-inhibited forms of aldehyde oxidoreductase.,Thapper A, Boer DR, Brondino CD, Moura JJ, Romao MJ J Biol Inorg Chem. 2007 Mar;12(3):353-66. Epub 2006 Dec 1. PMID:17139522[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

Loading citation details..
Citations
reviews cite this structure
No citations found

See Also

References

  1. Thapper A, Boer DR, Brondino CD, Moura JJ, Romao MJ. Correlating EPR and X-ray structural analysis of arsenite-inhibited forms of aldehyde oxidoreductase. J Biol Inorg Chem. 2007 Mar;12(3):353-66. Epub 2006 Dec 1. PMID:17139522 doi:10.1007/s00775-006-0191-9

Contents


PDB ID 3l4p

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools