4bum

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Crystal structure of the Voltage Dependant Anion Channel 2 from zebrafish.

Structural highlights

4bum is a 1 chain structure with sequence from Danio rerio. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.801Å
Ligands:LDA
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

Q8AWD0_DANRE

Publication Abstract from PubMed

In recent years, there has been a vast increase in structural and functional understanding of VDAC1, but VDAC2 and 3 have been understudied despite having many unique phenotypes. One reason for the paucity of structural and biochemical characterization of the 2 and 3 isoforms stems from the inability of obtaining purified, functional protein. Here we demonstrate the expression, isolation, and basic characterization of zebrafish (zf) VDAC2. Further, we resolved the structure of zfVDAC2 at 2.8A resolution revealing a crystallographic dimer. The dimer orientation was confirmed in solution by double electron-electron resonance spectroscopy and by cross-linking experiments disclosing a dimer population of ~20% in LDAO detergent micelles and ~40% in lipidic bicelles with the presence of some higher order oligomers in the latter. The present study allows for a more accurate structural comparison between VDAC2 and its better-studied counterpart VDAC1.

High-Resolution Structure and Double Electron-Electron Resonance of the Zebrafish Voltage Dependent Anion Channel 2 Reveal an Oligomeric Population.,Schredelseker J, Paz A, Lopez CJ, Altenbach C, Leung CS, Drexler MK, Chen JN, Hubbell WL, Abramson J J Biol Chem. 2014 Mar 13. PMID:24627492[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

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See Also

References

  1. Schredelseker J, Paz A, Lopez CJ, Altenbach C, Leung CS, Drexler MK, Chen JN, Hubbell WL, Abramson J. High-Resolution Structure and Double Electron-Electron Resonance of the Zebrafish Voltage Dependent Anion Channel 2 Reveal an Oligomeric Population. J Biol Chem. 2014 Mar 13. PMID:24627492 doi:http://dx.doi.org/10.1074/jbc.M113.497438

Contents


PDB ID 4bum

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