4p2c

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Complex of Shiga toxin 2e with a neutralizing single-domain antibody

Structural highlights

4p2c is a 11 chain structure with sequence from Escherichia coli and Lama glama. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.818Å
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

Q7WUF4_ECOLX

Publication Abstract from PubMed

Shiga toxin Stx2e is the major known agent that causes edema disease in newly weaned pigs. This severe disease is characterized by neurological disorders, hemorrhagic lesions, and frequent fatal outcomes. Stx2e constitutes of an enzymatically active A subunit and 5 B subunits that bind to a specific glycolipid receptor on host cells. It is evident that antibodies binding to the A subunit or the B subunits of Shiga toxin variants may have the capability to inhibit their cytotoxicity. Here, we report the discovery and characterization of a VHH single domain antibody (nanobody) isolated from a llama phage display library which confers potent neutralizing capacity against Stx2e toxin. We further present the crystal structure of the complex formed between the nanobody (NbStx2e1) and the Stx2e toxoid, determined at 2.8 A resolution. Structural analysis revealed that for each B subunit of Stx2e one NbStx2e1 is interacting in a head-to-head orientation and directly competing with the glycolipid receptor binding site on the surface of the B subunit. The neutralizing NbStx2e1 can in future be used to prevent or treat edema disease.

The Molecular Mechanism of Shiga Toxin Stx2e Neutralization by a Single-domain Antibody Targeting the Cell Receptor-binding Domain.,Lo AW, Moonens K, De Kerpel M, Brys L, Pardon E, Remaut H, De Greve H J Biol Chem. 2014 Jul 22. pii: jbc.M114.566257. PMID:25053417[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

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Citations
6 reviews cite this structure
Desmyter et al. (2015)
No citations found

See Also

References

  1. Lo AW, Moonens K, De Kerpel M, Brys L, Pardon E, Remaut H, De Greve H. The Molecular Mechanism of Shiga Toxin Stx2e Neutralization by a Single-domain Antibody Targeting the Cell Receptor-binding Domain. J Biol Chem. 2014 Jul 22. pii: jbc.M114.566257. PMID:25053417 doi:http://dx.doi.org/10.1074/jbc.M114.566257

Contents


PDB ID 4p2c

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