4v8p

From Proteopedia

Jump to: navigation, search

T.thermophila 60S ribosomal subunit in complex with initiation factor 6.

Structural highlights

4v8p is a 40 chain structure with sequence from Tetrahymena thermophila. This structure supersedes the now removed PDB entries 4a17, 4a18, 4a19, 4a1a, 4a1b, 4a1c, 4a1d and 4a1e. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 3.52Å
Ligands:MG, ZN
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

RL37_TETTS Binds to the 23S rRNA.

Publication Abstract from PubMed

Protein synthesis in all organisms is catalyzed by ribosomes. In comparison to their prokaryotic counterparts, eukaryotic ribosomes are considerably larger and are subject to more complex regulation. The large ribosomal subunit (60S) catalyzes peptide bond formation and contains the nascent polypeptide exit tunnel. We present the structure of the 60S ribosomal subunit from Tetrahymena thermophila in complex with eukaryotic initiation factor 6 (eIF6), cocrystallized with the antibiotic cycloheximide (a eukaryotic-specific inhibitor of protein synthesis), at a resolution of 3.5 angstroms. The structure illustrates the complex functional architecture of the eukaryotic 60S subunit, which comprises an intricate network of interactions between eukaryotic-specific ribosomal protein features and RNA expansion segments. It reveals the roles of eukaryotic ribosomal protein elements in the stabilization of the active site and the extent of eukaryotic-specific differences in other functional regions of the subunit. Furthermore, it elucidates the molecular basis of the interaction with eIF6 and provides a structural framework for further studies of ribosome-associated diseases and the role of the 60S subunit in the initiation of protein synthesis.

Crystal structure of the eukaryotic 60S ribosomal subunit in complex with initiation factor 6.,Klinge S, Voigts-Hoffmann F, Leibundgut M, Arpagaus S, Ban N Science. 2011 Nov 18;334(6058):941-8. Epub 2011 Nov 3. PMID:22052974[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

Loading citation details..
Citations
No citations found

See Also

References

  1. Klinge S, Voigts-Hoffmann F, Leibundgut M, Arpagaus S, Ban N. Crystal structure of the eukaryotic 60S ribosomal subunit in complex with initiation factor 6. Science. 2011 Nov 18;334(6058):941-8. Epub 2011 Nov 3. PMID:22052974 doi:10.1126/science.1211204

Contents


PDB ID 4v8p

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools