5b5e

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Crystal structure analysis of Photosystem II complex

Structural highlights

5b5e is a 20 chain structure with sequence from Thermostichus vulcanus. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Ligands:BCR, BCT, CA, CL, CLA, DGD, DMS, FE2, FME, HEC, HEM, HTG, LHG, LMG, LMT, MG, OEX, PHO, PL9, RRX, SQD, UNL
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

PSBJ_THEVL This protein is a component of the reaction center of photosystem II (PSII). PSII is a light-driven water plastoquinone oxidoreductase, using light energy to abstract electrons from H(2)O, generating a proton gradient subsequently used for ATP formation.[HAMAP-Rule:MF_01305]

Publication Abstract from PubMed

The oxygen-evolving complex (OEC) forms the heart of photosystem II (PSII) in photosynthesis. The crystal structure of PSII from Thermosynechococcus vulcanus has been reported at a resolution of 1.9 A and at an averaged X-ray dose of 0.43 MGy. The OEC structure is suggested to be partially reduced to Mn(II) by EXAFS and DFT computational studies. Recently, the "radiation-damage-free" structures have been published at 1.95 A resolution using XFEL, but reports continued to appear that the OEC is reduced to the S0-state of the Kok cycle. To elucidate much more precise structure of the OEC, in this study two structures were determined at extremely low X-ray doses of 0.03 and 0.12 MGy using conventional synchrotron radiation source. The results indicated that the X-ray reduction effects on the OEC were very small in the low dose region below 0.12 MGy, that is, a threshold existed for the OEC structural changes caused by X-ray exposure. The OEC structures of the two identical monomers in the crystal were clearly different under the threshold of the radiation dose, although the surrounding polypeptide frameworks of PSII were the same. The assumption that the OECs in the crystal were in the dark-stable S1-state of the Kok cycle should be re-evaluated.

Two Different Structures of the Oxygen-Evolving Complex in the Same Polypeptide Frameworks of Photosystem II.,Tanaka A, Fukushima Y, Kamiya N J Am Chem Soc. 2017 Jan 30. doi: 10.1021/jacs.6b09666. PMID:28102667[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

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References

  1. Tanaka A, Fukushima Y, Kamiya N. Two Different Structures of the Oxygen-Evolving Complex in the Same Polypeptide Frameworks of Photosystem II. J Am Chem Soc. 2017 Jan 30. doi: 10.1021/jacs.6b09666. PMID:28102667 doi:http://dx.doi.org/10.1021/jacs.6b09666

Contents


PDB ID 5b5e

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