5gl5

From Proteopedia

Jump to: navigation, search

Sterol 3-beta-glucosyltransferase (ugt51) from Saccharomyces cerevisiae (strain ATCC 204508 / S288c): UDPG complex

Structural highlights

5gl5 is a 2 chain structure with sequence from Saccharomyces cerevisiae S288C. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.9Å
Ligands:UPG
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

ATG26_YEAST May be involved in decane metabolism (By similarity). Involved in the biosynthesis of sterol glucoside. Not involved in autophagy-related pathways.[1] [2]

Publication Abstract from PubMed

Sterol glycosyltransferases catalyze the formation of a variety of glycosylated sterol derivatives and are involved in producing a plethora of bioactive natural products. To understand the molecular mechanism of sterol glycosyltransferases, we determined crystal structures of a sterol glycosyltransferase UGT51 from Saccharomyces cerevisiae. The structures of the UGT51 and its complex with uridine diphosphate glucose (UDPG) were solved at resolutions of 2.77 A and 1.9 A, respectively. The structural analysis revealed that a long hydrophobic cavity, 9.2 A in width and 17.6 A in length located at the N-terminal domain of UGT51, is suitable for the accommodation of sterol acceptor substrates. Furthermore, a short, conserved sequence of S847-M851 was identified at the bottom of the hydrophobic cavity, which might be the steroid binding site and play an important role for the UGT51 catalytic specificity towards sterols. Molecular docking simulations indicated that changed unique interaction network in mutant M7_1 (S(801)A/L(802)A/V(804)A/K(812)A/E(816)K/S(849)A/N(892)D), with an 1800-fold activity improvement toward an unnatural substrate protopanaxadiol (PPD), might influence its substrate preference. This study reported the first sterol glycosyltransferase structure, providing a molecular blueprint for generating tailored sterol glycosyltransferases as potential catalytic elements in synthetic biology.

Structural Dissection of Sterol Glycosyltransferase UGT51 from Saccharomyces cerevisiae for Substrate Specificity.,Chen L, Zhang Y, Feng Y J Struct Biol. 2018 Nov 2. pii: S1047-8477(18)30284-3. doi:, 10.1016/j.jsb.2018.11.001. PMID:30395931[3]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

Loading citation details..
Citations
reviews cite this structure
No citations found

See Also

References

  1. Warnecke D, Erdmann R, Fahl A, Hube B, Muller F, Zank T, Zahringer U, Heinz E. Cloning and functional expression of UGT genes encoding sterol glucosyltransferases from Saccharomyces cerevisiae, Candida albicans, Pichia pastoris, and Dictyostelium discoideum. J Biol Chem. 1999 May 7;274(19):13048-59. PMID:10224056
  2. Cao Y, Klionsky DJ. Atg26 is not involved in autophagy-related pathways in Saccharomyces cerevisiae. Autophagy. 2007 Jan-Feb;3(1):17-20. Epub 2007 Jan 7. PMID:17012830
  3. Chen L, Zhang Y, Feng Y. Structural Dissection of Sterol Glycosyltransferase UGT51 from Saccharomyces cerevisiae for Substrate Specificity. J Struct Biol. 2018 Nov 2. pii: S1047-8477(18)30284-3. doi:, 10.1016/j.jsb.2018.11.001. PMID:30395931 doi:http://dx.doi.org/10.1016/j.jsb.2018.11.001

Contents


PDB ID 5gl5

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools