6dq1

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sfGFP N149 mutated to 4-nitro-L-phenylalanine

Structural highlights

6dq1 is a 1 chain structure with sequence from Aequorea victoria. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.598Å
Ligands:CRO, NA, PPN
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

GFP_AEQVI Energy-transfer acceptor. Its role is to transduce the blue chemiluminescence of the protein aequorin into green fluorescent light by energy transfer. Fluoresces in vivo upon receiving energy from the Ca(2+)-activated photoprotein aequorin.

Publication Abstract from PubMed

The X-ray crystal structures of two superfolder green fluorescent protein (sfGFP) constructs containing a genetically incorporated spectroscopic reporter unnatural amino acid, 4-nitro-L-phenylalanine (pNO2F), at two unique sites in the protein have been determined. Amber codon-suppression methodology was used to site-specifically incorporate pNO2F at a solvent-accessible (Asp133) and a partially buried (Asn149) site in sfGFP. The Asp133pNO2F sfGFP construct crystallized with two molecules per asymmetric unit in space group P3221 and the crystal structure was refined to 2.05 A resolution. Crystals of Asn149pNO2F sfGFP contained one molecule of sfGFP per asymmetric unit in space group P4122 and the structure was refined to 1.60 A resolution. The alignment of Asp133pNO2F or Asn149pNO2F sfGFP with wild-type sfGFP resulted in small root-mean-square deviations, illustrating that these residues do not significantly alter the protein structure and supporting the use of pNO2F as an effective spectroscopic reporter of local protein structure and dynamics.

Crystal structures of green fluorescent protein with the unnatural amino acid 4-nitro-L-phenylalanine.,Maurici N, Savidge N, Lee BU, Brewer SH, Phillips-Piro CM Acta Crystallogr F Struct Biol Commun. 2018 Oct 1;74(Pt 10):650-655. doi:, 10.1107/S2053230X1801169X. Epub 2018 Sep 19. PMID:30279317[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

See Also

References

  1. Maurici N, Savidge N, Lee BU, Brewer SH, Phillips-Piro CM. Crystal structures of green fluorescent protein with the unnatural amino acid 4-nitro-L-phenylalanine. Acta Crystallogr F Struct Biol Commun. 2018 Oct 1;74(Pt 10):650-655. doi:, 10.1107/S2053230X1801169X. Epub 2018 Sep 19. PMID:30279317 doi:http://dx.doi.org/10.1107/S2053230X1801169X

Contents


PDB ID 6dq1

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