6egs
From Proteopedia
Crystal structure of the GalNAc-T2 F104S mutant in complex with UDP-GalNAc
Structural highlights
Function[GALT2_HUMAN] Catalyzes the initial reaction in O-linked oligosaccharide biosynthesis, the transfer of an N-acetyl-D-galactosamine residue to a serine or threonine residue on the protein receptor. Has a broad spectrum of substrates for peptides such as EA2, Muc5AC, Muc1a, Muc1b. Probably involved in O-linked glycosylation of the immunoglobulin A1 (IgA1) hinge region.[1] [2] Publication Abstract from PubMedThe family of polypeptide GalNAc-transferases (GalNAc-Ts) orchestrates the initiating step of mucin-type protein O-glycosylation by transfer of GalNAc moieties to serine and threonine residues in proteins. Deficiencies and dysregulation of GalNAc-T isoenzymes have been found to be related to different diseases. Recently, we have demonstrated that an inactive GalNAc-T2 mutant (F104S), which is not located at the active site, induces low levels of high-density lipoprotein cholesterol (HDL-C) in humans. Here, we have deciphered the molecular basis for F104S mutant inactivation. Saturation transfer difference NMR experiments demonstrate that the mutation induces loss of binding to peptide substrates. The analysis of the crystal structure of the F104S mutant bound to UDP-GalNAc, combined with molecular dynamics (MD) simulations, has revealed that the flexible loop is disordered and displays larger conformational changes in the mutant enzyme than in the wild-type (WT) enzyme. 19F-NMR experiments reveal that the WT enzyme reaches the active state only in the presence of UDP-GalNAc, providing compelling evidences that GalNAc-T2 adopts an UDP-GalNAc-dependent induced-fit mechanism. The F104S mutation precludes the enzyme to achieve the active conformation and concomitantly to bind peptide substrates. The present study provides new insights into the catalytic mechanism of the large family of GalNAc-Ts and how these enzymes orchestrate protein O-glycosylation. Structural analysis of a GalNAc-T2 mutant reveals an induced-fit catalytic mechanism for GalNAc-Ts.,Hurtado-Guerrero R, de Las Rivas M, Coelho H, Diniz A, Lira-Navarrete E, Companon I, Jimenez-Barbero J, T Schjoldager K, P Bennett E, Y Vakhrushev S, Clausen H, Corzana F, Marcelo F Chemistry. 2018 Mar 30. doi: 10.1002/chem.201800701. PMID:29601100[3] From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine. References
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Categories: Human | Polypeptide N-acetylgalactosaminyltransferase | Bennett, E P | Clausen, H | Coelho, H | Corzana, F | Diniz, A | Hurtado-Guerrero, R | Jimenez-Barbero, J | Lira-Navarrete, E | Marcelo, F | Rivas, M de las | Schjoldager, K T | Vakhrushev, S Y | F104s mutant | Flexible loop | Galnac-t2 | Glycosyltransferase | Hdl | Inactive/active state | Transferase