6fv5

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QTRT2, the non-catalytic subunit of murine tRNA-Guanine Transglycosylase

Structural highlights

6fv5 is a 2 chain structure with sequence from Mus musculus. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.179Å
Ligands:MLI, PEG, ZN
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

QTRT2_MOUSE Non-catalytic subunit of the queuine tRNA-ribosyltransferase (TGT) that catalyzes the base-exchange of a guanine (G) residue with queuine (Q) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2-cyclopenten-1-yl)amino)methyl)-7-deazaguanosine).[HAMAP-Rule:MF_03043][1]

Publication Abstract from PubMed

The bacterial enzyme tRNA-guanine transglycosylase (TGT) is involved in the biosynthesis of queuosine, a modified nucleoside present in the anticodon wobble position of tRNAsHis,Tyr,Asp,Asn. Although it forms a stable homodimer endowed with two active sites, it is, for steric reasons, able to bind and convert only one tRNA molecule at a time. In contrast, its mammalian counterpart constitutes a heterodimer consisting of a catalytic and a noncatalytic subunit, referred to as QTRT1 and QTRT2, respectively. Both subunits are homologous to the bacterial enzyme, yet only QTRT1 possesses all the residues required for substrate binding and catalysis. In mice, genetic inactivation of the TGT results in the uncontrolled oxidation of tetrahydrobiopterin and, accordingly, to phenylketonuria-like symptoms. Due to this fact and the recent finding that mammalian TGT may be utilised for the treatment of multiple sclerosis, this enzyme is of potential medical relevance rendering detailed knowledge about its biochemistry and structural architecture highly desirable. In the present study, we performed the kinetic characterisation of the murine enzyme, investigated potential quaternary structures of QTRT1 and QTRT2 via noncovalent mass spectrometry, and, finally, determined the crystal structure of the murine noncatalytic TGT subunit, QTRT2. In the crystal, QTRT2 is clearly present as a homodimer with striking similarity to that formed by bacterial TGT. In particular, a cluster of four aromatic residues within the interface of the bacterial TGT, which constitutes a "hot spot" for dimer stability, is present in similar constellation in QTRT2.

Homodimer architecture of QTRT2, the noncatalytic subunit of the eukaryotic tRNA-guanine transglycosylase.,Behrens C, Biela I, Petiot-Becard S, Botzanowski T, Cianferani S, Sager CP, Klebe G, Heine A, Reuter K Biochemistry. 2018 Jun 4. doi: 10.1021/acs.biochem.8b00294. PMID:29862811[2]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

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See Also

References

  1. Boland C, Hayes P, Santa-Maria I, Nishimura S, Kelly VP. Queuosine formation in eukaryotic tRNA occurs via a mitochondria-localized heteromeric transglycosylase. J Biol Chem. 2009 Jul 3;284(27):18218-27. doi: 10.1074/jbc.M109.002477. Epub 2009, May 4. PMID:19414587 doi:http://dx.doi.org/10.1074/jbc.M109.002477
  2. Behrens C, Biela I, Petiot-Becard S, Botzanowski T, Cianferani S, Sager CP, Klebe G, Heine A, Reuter K. Homodimer architecture of QTRT2, the noncatalytic subunit of the eukaryotic tRNA-guanine transglycosylase. Biochemistry. 2018 Jun 4. doi: 10.1021/acs.biochem.8b00294. PMID:29862811 doi:http://dx.doi.org/10.1021/acs.biochem.8b00294

Contents


PDB ID 6fv5

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