6m96

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ATP-bound conformation of the WzmWzt O antigen ABC transporter

Structural highlights

6m96 is a 2 chain structure with sequence from Aquifex aeolicus VF5. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.05Å
Ligands:ATP, GOL, LDA, P4G, PEE, PG4, SO4
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

O67181_AQUAE

Publication Abstract from PubMed

Extracellular glycan biosynthesis is a widespread microbial protection mechanism. In Gram-negative bacteria, the O antigen polysaccharide represents the variable region of outer membrane lipopolysaccharides. Fully assembled lipid-linked O antigens are translocated across the inner membrane by the WzmWzt ABC transporter for ligation to the lipopolysaccharide core, with the transporter forming a continuous transmembrane channel in a nucleotide-free state. Here, we report its structure in an ATP-bound conformation. Large structural changes within the nucleotide-binding and transmembrane regions push conserved hydrophobic residues at the substrate entry site towards the periplasm and provide a model for polysaccharide translocation. With ATP bound, the transporter forms a large transmembrane channel with openings toward the membrane and periplasm. The channel's periplasmic exit is sealed by detergent molecules that block solvent permeation. Molecular dynamics simulation data suggest that, in a biological membrane, lipid molecules occupy this periplasmic exit and prevent water flux in the transporter's resting state.

A lipid gating mechanism for the channel-forming O antigen ABC transporter.,Caffalette CA, Corey RA, Sansom MSP, Stansfeld PJ, Zimmer J Nat Commun. 2019 Feb 18;10(1):824. doi: 10.1038/s41467-019-08646-8. PMID:30778065[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

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See Also

References

  1. Caffalette CA, Corey RA, Sansom MSP, Stansfeld PJ, Zimmer J. A lipid gating mechanism for the channel-forming O antigen ABC transporter. Nat Commun. 2019 Feb 18;10(1):824. doi: 10.1038/s41467-019-08646-8. PMID:30778065 doi:http://dx.doi.org/10.1038/s41467-019-08646-8

Contents


PDB ID 6m96

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