6z1p

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Structure of the mitochondrial ribosome from Tetrahymena thermophila

Structural highlights

6z1p is a 10 chain structure with sequence from Tetrahymena thermophila SB210. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:Electron Microscopy, Resolution 3.7Å
Ligands:ATP, FES, MG, ZN
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

Q23UD3_TETTS

Publication Abstract from PubMed

To understand the steps involved in the evolution of translation, we used Tetrahymena thermophila, a ciliate with high coding capacity of the mitochondrial genome, as the model organism and characterized its mitochondrial ribosome (mitoribosome) using cryo-EM. The structure of the mitoribosome reveals an assembly of 94-ribosomal proteins and four-rRNAs with an additional protein mass of ~700 kDa on the small subunit, while the large subunit lacks 5S rRNA. The structure also shows that the small subunit head is constrained, tRNA binding sites are formed by mitochondria-specific protein elements, conserved protein bS1 is excluded, and bacterial RNA polymerase binding site is blocked. We provide evidence for anintrinsic protein targeting system through visualization of mitochondria-specific mL105 by the exit tunnel that would facilitate the recruitment of a nascent polypeptide. Functional protein uS3m is encoded by three complementary genes from the nucleus and mitochondrion, establishing a link between genetic drift and mitochondrial translation. Finally, we reannotated nine open reading frames in the mitochondrial genome that code for mitoribosomal proteins.

Ciliate mitoribosome illuminates evolutionary steps of mitochondrial translation.,Tobiasson V, Amunts A Elife. 2020 Jun 18;9. pii: 59264. doi: 10.7554/eLife.59264. PMID:32553108[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

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See Also

References

  1. Tobiasson V, Amunts A. Ciliate mitoribosome illuminates evolutionary steps of mitochondrial translation. Elife. 2020 Jun 18;9. pii: 59264. doi: 10.7554/eLife.59264. PMID:32553108 doi:http://dx.doi.org/10.7554/eLife.59264

Contents


PDB ID 6z1p

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