7a6f

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Nanodisc reconstituted human ABCB1 in complex with MRK16 Fab and zosuquidar

Structural highlights

7a6f is a 3 chain structure with sequence from Homo sapiens and Mus musculus. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:Electron Microscopy, Resolution 3.5Å
Ligands:CLR
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Disease

MDR1_HUMAN Ulcerative colitis. Disease susceptibility is associated with variations affecting the gene represented in this entry.

Function

MDR1_HUMAN Energy-dependent efflux pump responsible for decreased drug accumulation in multidrug-resistant cells.

Publication Abstract from PubMed

ABCB1 detoxifies cells by exporting diverse xenobiotic compounds, thereby limiting drug disposition and contributing to multidrug resistance in cancer cells. Multiple small-molecule inhibitors and inhibitory antibodies have been developed for therapeutic applications, but the structural basis of their activity is insufficiently understood. We determined cryo-EM structures of nanodisc-reconstituted, human ABCB1 in complex with the Fab fragment of the inhibitory, monoclonal antibody MRK16 and bound to a substrate (the antitumor drug vincristine) or to the potent inhibitors elacridar, tariquidar, or zosuquidar. We found that inhibitors bound in pairs, with one molecule lodged in the central drug-binding pocket and a second extending into a phenylalanine-rich cavity that we termed the "access tunnel." This finding explains how inhibitors can act as substrates at low concentration, but interfere with the early steps of the peristaltic extrusion mechanism at higher concentration. Our structural data will also help the development of more potent and selective ABCB1 inhibitors.

Cryo-EM structures reveal distinct mechanisms of inhibition of the human multidrug transporter ABCB1.,Nosol K, Romane K, Irobalieva RN, Alam A, Kowal J, Fujita N, Locher KP Proc Natl Acad Sci U S A. 2020 Oct 5. pii: 2010264117. doi:, 10.1073/pnas.2010264117. PMID:33020312[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

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See Also

References

  1. Nosol K, Romane K, Irobalieva RN, Alam A, Kowal J, Fujita N, Locher KP. Cryo-EM structures reveal distinct mechanisms of inhibition of the human multidrug transporter ABCB1. Proc Natl Acad Sci U S A. 2020 Oct 20;117(42):26245-26253. PMID:33020312 doi:10.1073/pnas.2010264117

Contents


PDB ID 7a6f

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