7p2i

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Dimethylated fusion protein of RSL and nucleoporin peptide (Nup) in complex with cucurbit[7]uril, F432 cage assembly

Structural highlights

7p2i is a 3 chain structure with sequence from Ralstonia solanacearum. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.489Å
Ligands:MFU, MLY, QQ7
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

A0A0S4TLR1_RALSL

Publication Abstract from PubMed

One approach to protein assembly involves water-soluble supramolecular receptors that act like glue. Bionano-architectures directed by these scaffolds are often system-specific with few studies investigating their customization. Here, we describe the modulation of cucurbituril-mediated protein assemblies via the inclusion of peptide tectons. Three peptides of varying length and structural order were N-terminally appended to RSL, a beta-propeller building block. Each fusion protein was incorporated into crystalline architectures mediated by cucurbit[7]uril (Q7). A trimeric coiled coil served as a spacer within a Q7 -directed sheet assembly of RSL, giving rise to a layered material of varying porosity. Within the spacer layers, the coiled coils were dynamic. This result prompted consideration of intrinsically disordered peptides (IDPs) as modulatory tectons. Similar to the coiled coil, a mussel adhesion peptide (Mefp) also acted as a spacer between protein-Q7 sheets. In contrast, the fusion of a nucleoporin peptide (Nup) to RSL did not recapitulate the sheet assembly. Instead, a Q -directed cage was adopted, within which disordered Nup peptides were partially "captured" by Q7 receptors. IDP capture occurred by macrocycle recognition of an intrapeptide Phe-Gly motif in which the benzyl side chain was encapsulated by Q7. The modularity of these protein-cucurbituril architectures adds a new dimension to macrocycle-mediated protein assembly. In addition, the segregated crystals, with alternating layers of high and low porosity, provide a basis for new types of materials.

Segregated Protein-Cucurbit[7]uril Crystalline Architectures via Modulatory Peptide Tectons.,Ramberg KO, Guagnini F, Engilberge S, Wronska MA, Rennie ML, Perez J, Crowley PB Chemistry. 2021 Aug 25. doi: 10.1002/chem.202103025. PMID:34432924[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

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References

  1. Ramberg KO, Guagnini F, Engilberge S, Wronska MA, Rennie ML, Perez J, Crowley PB. Segregated Protein-Cucurbit[7]uril Crystalline Architectures via Modulatory Peptide Tectons. Chemistry. 2021 Aug 25. doi: 10.1002/chem.202103025. PMID:34432924 doi:http://dx.doi.org/10.1002/chem.202103025

Contents


PDB ID 7p2i

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