Talk:NMR Ensembles of Models

From Proteopedia

Olderado server and what is said about it needs updating?

Currently this page says:

"The most representative model is the model closest to the average model. A server called Olderado reports the most representative model, and enables you to download it separately."

The link for Olderado now goes to PDBePISA. Does that cover that feature? My quick investigation didn't indicate it did and I wonder if they just picked a featured EMBL-EBI webserver to point at since the other wasn't working?

Is that server and what it points to now moot and needs editing? Here says, 'NMR structures are commonly deposited as ensembles of structures. The best representative model is made available as the “Assembly” coordinates. '

---Additional Details on looking at that from last week:---

That now redirects to PDBePISA. It has been doing that since about 2016 [according to the Internet Wayback Machine](https://web.archive.org/web/20160115000000*/http://www.ebi.ac.uk/msd-srv/pqs/pqs-nmr.html).

[The Version Log for PDBePISA](https://www.ebi.ac.uk/pdbe/pisa/pi_vlog.html) says for Version 1.11 23/04/2007:

>Added analysis of custom assemblies given As Is by coordinate section in PDB or mmCIF files. This analysis does not use crystal descriptions, therefore it is applicable to NMR structures. The results are found in the "assemblies" section.

That is all I could find concerning NMR and PDBePISA. I don't know if that means it covers what OLDERADO did. I haven't used PDBePISA for NMR, only crystal structures.

NMR data distribution in a unified format at the PDB from 2020

I don't know if https://www.rcsb.org/news/feature/5e1c821ea5007a04a313eda5 is covered here yet?