5twx

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Crystal Structure of BRD9 bromodomain

Structural highlights

5twx is a 4 chain structure with sequence from Homo sapiens. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.55Å
Ligands:7P7
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

BRD9_HUMAN May play a role in chromatin remodeling and regulation of transcription.

Publication Abstract from PubMed

The bromodomain-containing protein BRD9, a subunit of the human BAF (SWI/SNF) nucleosome remodeling complex, has emerged as an attractive therapeutic target in cancer. Despite the development of chemical probes targeting the BRD9 bromodomain, there is a limited understanding of BRD9 function beyond acetyl-lysine recognition. We have therefore created the first BRD9-directed chemical degraders, through iterative design and testing of heterobifunctional ligands that bridge the BRD9 bromodomain and the cereblon E3 ubiquitin ligase complex. Degraders of BRD9 exhibit markedly enhanced potency compared to parental ligands (10- to 100-fold). Parallel study of degraders with divergent BRD9-binding chemotypes in models of acute myeloid leukemia resolves bromodomain polypharmacology in this emerging drug class. Together, these findings reveal the tractability of non-BET bromodomain containing proteins to chemical degradation, and highlight lead compound dBRD9 as a tool for the study of BRD9.

Degradation of the BAF Complex Factor BRD9 by Heterobifunctional Ligands.,Remillard D, Buckley DL, Paulk J, Brien GL, Sonnett M, Seo HS, Dastjerdi S, Wuhr M, Dhe-Paganon S, Armstrong SA, Bradner JE Angew Chem Int Ed Engl. 2017 May 15;56(21):5738-5743. doi:, 10.1002/anie.201611281. Epub 2017 Apr 18. PMID:28418626[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

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See Also

References

  1. Remillard D, Buckley DL, Paulk J, Brien GL, Sonnett M, Seo HS, Dastjerdi S, Wuhr M, Dhe-Paganon S, Armstrong SA, Bradner JE. Degradation of the BAF Complex Factor BRD9 by Heterobifunctional Ligands. Angew Chem Int Ed Engl. 2017 May 15;56(21):5738-5743. doi:, 10.1002/anie.201611281. Epub 2017 Apr 18. PMID:28418626 doi:http://dx.doi.org/10.1002/anie.201611281

Contents


PDB ID 5twx

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