User:David Canner/Sandbox 6: Difference between revisions

From Proteopedia
Jump to navigationJump to search
← Older editNewer edit →
David Canner (talk | contribs)
7,699 edits
No edit summary
David Canner (talk | contribs)
7,699 edits
No edit summary
Line 137: Line 137:
**[[VirE1/VirE2]]
**[[VirE1/VirE2]]
**[[Zinc Fingers]]
**[[Zinc Fingers]]
<!-- End of topic pages. Please DON'T REMOVE -->
*Well Developed PDB Code Pages
----
}}
==PDB Code Pages==
Here is a manually maintained list of pages titled with PDB codes that have especially well-developed content.
Here is a manually maintained list of pages titled with PDB codes that have especially well-developed content.


*[[1d9z]] The DNA repair protein UVRB in complex with ATP
**[[1d9z]] The DNA repair protein UVRB in complex with ATP
*[[1gm5]] ''Thermotoga maritima'' RecG in complex with a synthetic three-way DNA junction resembling a stalled replication fork. [[Image:New_yellow1.gif]]
**[[1gm5]] ''Thermotoga maritima'' RecG in complex with a synthetic three-way DNA junction resembling a stalled replication fork. [[Image:New_yellow1.gif]]
*[[1eve]] Acetylcholinesterase complexed with the anti-Alzheimer's disease drug Aricept.
**[[1eve]] Acetylcholinesterase complexed with the anti-Alzheimer's disease drug Aricept.
*[[1mr4]] Antifungal and insecticidal protein NaD1 from ''Nicotiana''
**[[1mr4]] Antifungal and insecticidal protein NaD1 from ''Nicotiana''
*[[1n4n]] Defensin from ''Petunia''
**[[1n4n]] Defensin from ''Petunia''
*[[1ogs]] Human acid-beta-glucosidase
**[[1ogs]] Human acid-beta-glucosidase
*[[1v04]] Paraoxonase-1 via directed evolution
**[[1v04]] Paraoxonase-1 via directed evolution
*[[1xjo]] Aminopeptidase
**[[1xjo]] Aminopeptidase
 
**[[2cek]] ''Torpedo californica'' acetylcholinesterase (TcAChE) in complex with the bifunctional inhibitor NF595, a potentially new anti-Alzheimer drug.
 
**[[2db3]] ''Drosophila melanogaster''DEAD-box helicase protein Vasa. [[Image:New_yellow1.gif]]
*[[2cek]] ''Torpedo californica'' acetylcholinesterase (TcAChE) in complex with the bifunctional inhibitor NF595, a potentially new anti-Alzheimer drug.
**[[2eyq]] ''Escherichia coli'' Mfd (TRCF, transcription-repair coupling factor). [[Image:New_yellow1.gif]]
*[[2db3]] ''Drosophila melanogaster''DEAD-box helicase protein Vasa. [[Image:New_yellow1.gif]]
**[[2ic8]] ''Escherichia coli'' GlpG, an integral membrane protein that belongs to the widespread rhomboid protease family
*[[2eyq]] ''Escherichia coli'' Mfd (TRCF, transcription-repair coupling factor). [[Image:New_yellow1.gif]]
**[[2p18]] ''Leishmania infantum'' Glyoxalase II
*[[2ic8]] ''Escherichia coli'' GlpG, an integral membrane protein that belongs to the widespread rhomboid protease family
**[[2rd0]] Phosphatidylinositol kinase oncogene, with many figures from the publication rendered in Jmol.
*[[2p18]] ''Leishmania infantum'' Glyoxalase II
**[[2rkx]] Chain D, cyclase subunit of imidazoleglycerol_evolvedcerolphosphate synthase
*[[2rd0]] Phosphatidylinositol kinase oncogene, with many figures from the publication rendered in Jmol.
**[[2v9d]] A prophage protein belonging to the dihydrodipicolinic acid synthase family
*[[2rkx]] Chain D, cyclase subunit of imidazoleglycerol_evolvedcerolphosphate synthase
**[[2veo]] X-ray structure of ''Candida antarctica'' lipase A in its closed state
*[[2v9d]] A prophage protein belonging to the dihydrodipicolinic acid synthase family
**[[3ews]] Human DExD/H-box RNA-dependent ATPase DDX19 in the open and [[3g0h|closed]] cleft conformation (includes morph). [[Image:New_yellow1.gif]]
*[[2veo]] X-ray structure of ''Candida antarctica'' lipase A in its closed state
**[[3dmq]] ''Escherichia coli'' Swi2/Snf2 protein RapA that recycles RNA polymerase during transcription. [[Image:New_yellow1.gif]]
 
**[[5p21]] The crystal structure of the H-ras oncogene protein p21 complexed to the slowly hydrolysing GTP analogue GppNp
 
*[[3ews]] Human DExD/H-box RNA-dependent ATPase DDX19 in the open and [[3g0h|closed]] cleft conformation (includes morph). [[Image:New_yellow1.gif]]
*[[3dmq]] ''Escherichia coli'' Swi2/Snf2 protein RapA that recycles RNA polymerase during transcription. [[Image:New_yellow1.gif]]
 
 
*[[5p21]] The crystal structure of the H-ras oncogene protein p21 complexed to the slowly hydrolysing GTP analogue GppNp


{{#tree:id=IndexByTopic|openlevels=0|
{{#tree:id=IndexByTopic|openlevels=0|

Revision as of 07:09, 19 September 2010

Index of Topics Pages

Topic pages are pages about proteins or molecules or families of proteins or molecules that are not named with a PDB code. Proteopedia contains a page for each entry in the PDB, created automatically, and these pages generally describe a particular solved structure. A topic page like hemoglobin, however, will address the protein in general, and refer to several solved structures such as 1gzx and 2hbs. And so, topic pages can be thought of as higher up in the heirarchy of page organization in Proteopedia than are PDB-code-titled pages. They are also never created automatically.

You might also be interested in Proteopedia's Table of Contents.

means that the article first became available in Proteopedia within the past four months, or that substantial new content was added within the past four months. See also What's New?.

Pages About Molecules (Not Titled with a PDB Code)

The list below is intended to include all pages about molecules or families of molecules that are not named with a PDB code, and that also have substantial content. Because this list is manually maintained, it may be out of date. For comparison, here is an automatically generated list of all pages whose titles do not begin with a numeral, and here is a list of all pages.

See also: About Macromolecular Structure, a list of pages not listed below.

{{#tree:id=AlphaIndex|openlevels=0|

Here is a manually maintained list of pages titled with PDB codes that have especially well-developed content.

    • 1d9z The DNA repair protein UVRB in complex with ATP
    • 1gm5 Thermotoga maritima RecG in complex with a synthetic three-way DNA junction resembling a stalled replication fork.
    • 1eve Acetylcholinesterase complexed with the anti-Alzheimer's disease drug Aricept.
    • 1mr4 Antifungal and insecticidal protein NaD1 from Nicotiana
    • 1n4n Defensin from Petunia
    • 1ogs Human acid-beta-glucosidase
    • 1v04 Paraoxonase-1 via directed evolution
    • 1xjo Aminopeptidase
    • 2cek Torpedo californica acetylcholinesterase (TcAChE) in complex with the bifunctional inhibitor NF595, a potentially new anti-Alzheimer drug.
    • 2db3 Drosophila melanogasterDEAD-box helicase protein Vasa.
    • 2eyq Escherichia coli Mfd (TRCF, transcription-repair coupling factor).
    • 2ic8 Escherichia coli GlpG, an integral membrane protein that belongs to the widespread rhomboid protease family
    • 2p18 Leishmania infantum Glyoxalase II
    • 2rd0 Phosphatidylinositol kinase oncogene, with many figures from the publication rendered in Jmol.
    • 2rkx Chain D, cyclase subunit of imidazoleglycerol_evolvedcerolphosphate synthase
    • 2v9d A prophage protein belonging to the dihydrodipicolinic acid synthase family
    • 2veo X-ray structure of Candida antarctica lipase A in its closed state
    • 3ews Human DExD/H-box RNA-dependent ATPase DDX19 in the open and closed cleft conformation (includes morph).
    • 3dmq Escherichia coli Swi2/Snf2 protein RapA that recycles RNA polymerase during transcription.
    • 5p21 The crystal structure of the H-ras oncogene protein p21 complexed to the slowly hydrolysing GTP analogue GppNp

Proteopedia Page Contributors and Editors (what is this?)

David Canner

Retrieved from "https://proteopedia.org/index.php?title=User:David_Canner/Sandbox_6&oldid=1121520"