Elongation factor 3D structures: Difference between revisions
From Proteopedia
Jump to navigationJump to search
Michal Harel (talk | contribs) No edit summary |
Michal Harel (talk | contribs) No edit summary |
||
| Line 299: | Line 299: | ||
*EF-Spt5 | *EF-Spt5 | ||
**[[8p4c]], [[8p4e]], [[8uis]] – hEF-Spt5 in transcription complex – Cryo EM<br /> | |||
**[[2e6z]] – hEF KOW2 motif residues 420-471 – NMR<BR /> | **[[2e6z]] – hEF KOW2 motif residues 420-471 – NMR<BR /> | ||
**[[2do3]] – hEF KOW3 motif residues 462-523 – NMR<BR /> | **[[2do3]] – hEF KOW3 motif residues 462-523 – NMR<BR /> | ||
| Line 310: | Line 311: | ||
**[[4ytl]] – yEF KOW2-KOW3 domain residues 534-632<br /> | **[[4ytl]] – yEF KOW2-KOW3 domain residues 534-632<br /> | ||
**[[4ytk]] – yEF KOW1-linker domain residues 382-511<br /> | **[[4ytk]] – yEF KOW1-linker domain residues 382-511<br /> | ||
**[[8jch]] – yEF in POL II complex – Cryo EM<br /> | |||
**[[8k5p]] – yEF in POL II complex + Rai1 – Cryo EM<br /> | |||
**[[8qsz]] – EF in POL II complex – fission yeast - Cryo EM<br /> | |||
**[[2exu]] – yEF<BR /> | **[[2exu]] – yEF<BR /> | ||
| Line 317: | Line 322: | ||
**[[4z2m]] – hEF middle domain + histone H3.1 + histone H4<br /> | **[[4z2m]] – hEF middle domain + histone H3.1 + histone H4<br /> | ||
**[[6gme]] – hEF SH2 domain residues 1317-1334<br /> | **[[6gme]] – hEF SH2 domain residues 1317-1334<br /> | ||
**[[7oop]], [[7opc]], [[7opd]] – hEF-Spt6 in RNA polymerase II transcription complex – Cryo EM<br /> | **[[7oop]], [[7opc]], [[7opd]], [[8oeu]], [[8oev]], [[8of0]] – hEF-Spt6 in RNA polymerase II transcription complex – Cryo EM<br /> | ||
**[[6ted]], [[7unc]], [[7und]] – pEF in RNA polymerase II transcription complex - CryoEM<br /> | **[[6ted]], [[7unc]], [[7und]] – pEF in RNA polymerase II transcription complex - CryoEM<br /> | ||
**[[3psf]], [[3psi]] – yEF core domain residues 235-1259<BR /> | **[[3psf]], [[3psi]] – yEF core domain residues 235-1259<BR /> | ||
| Line 332: | Line 337: | ||
**[[5umu]], [[5umt]], [[5xm2]] – hEF<br /> | **[[5umu]], [[5umt]], [[5xm2]] – hEF<br /> | ||
**[[5e5b]] - hEF N-terminal<BR /> | **[[5e5b]] - hEF N-terminal<BR /> | ||
**[[8i17]] - hEF + histone 2A + histone 2B<BR /> | |||
*EF-M2-1 | *EF-M2-1 | ||
| Line 342: | Line 348: | ||
**[[5ol8]] - hEF C-terminal<br /> | **[[5ol8]] - hEF C-terminal<br /> | ||
**[[5ola]] - hEF + RNA polymerase + RNA + DNA<br /> | **[[5ola]] - hEF + RNA polymerase + RNA + DNA<br /> | ||
**[[8u8u]], [[8u8v]], [[9bdc]], [[9bdd]] - hEF + RNA polymerase + RNA + DNA – Cryo EM<br /> | |||
*EF-CA150 | *EF-CA150 | ||
Revision as of 10:20, 20 May 2025
3D structures of elongation factor
Updated on 20-May-2025
- Elongin C
- Elongin BC complex
- 1lqb, 1lm8 – hEloBC + VHL + hypoxia inducible factor 1 α
- 6i7q, 6i7r – hEloBC + VHL + hypoxia inducible factor 2 α
- 7q2j, 8bb2, 8bb3, 8bb4, 8bb5 – hEloBC + VHL + WD repeat-containing protein 5
- 7jto, 7jtp – hEloBC + VHL + WD repeat-containing protein 5 + inhibitor
- 7znt – hEloBC + VHL + bromodomain-containing protein 4
- 3zrc, 3ztc, 3ztd, 3zun, 4awj, 4b95, 4b9k, 4bks, 4bkt, 4w9l, 4w9k, 4w9j, 4w9i, 4w9h, 4w9g, 4w9f, 4w9e, 4w9d, 4w9c, 5nw2, 5nw1, 5nw0, 5nvz, 5nvy, 5nvx, 5nvw, 5nvv, 6fmi, 6fmj, 6fmk, 6gfy, 8c13 - hEloBC + VHL + inhibitor
- 5t35, 6sis - hEloBC + VHL + BRD4
- 7khh - hEloBC + VHL + BRD4 + inhibitor
- 7s4e, 7z6l, 7z76, 7z77 - hEloBC + VHL + SMARCA2 + inhibitor<br /
- 4wqo - hEloBC + VHL + cullin-2
- 6hr2, 6hay, 6hax - hEloBC + VHL + transcription activator
- 4ajy - hEloBC + hypoxia inducible factor peptide
- 6gmr, 6gfx, 6bvb - hEloBC + VHL + hypoxia inducible factor peptide
- 5n4w - hEloBC + von-Hippel Lindau disease tumor suppressor + cullin-2 + RBX1
- 4n9f - hEloBC + VIF+ cullin-5 + CBF
- 2ma9 - hEloBC + VIF - NMR
- 3zrf, 5lli, 6gmx, 6gmq, 6gmn, 6gfz - hEloBC + VHL
- 6zhc - hEloBC + VHL + Bcl-2-like protein
- 2c9w, 2izv, 2jz3, 5bo4 – hEloBC + suppressor of cytokine signaling
- 6c5x, 6i4x, 6i5n, 6i5j 7m6t – hEloBC + suppressor of cytokine signaling + Gp130 peptide
- 6i5n, 6i5j – hEloBC + suppressor of cytokine signaling + growth hormone receptor peptide
- 6i4x – hEloBC + suppressor of cytokine signaling + erythropoietin peptide
- 6p59 - hEloBC + virion infectivity factor + CBF b
- 3zkj - hEloBC + ankyrin rep
- 1vcb – hEloBC + VHL
- 3zng – hEloBC + ASB-9
- 6v9h – hEloBC + creatine kinase + ASB-9 – Cryo EM
- 6r6h, 6r7f, 6r7h, 6r7i, 6r7n – hEloBC in signalosome – Cryo EM
- 2fnj - mEloBC + GUSTAVUS
- 1lqb, 1lm8 – hEloBC + VHL + hypoxia inducible factor 1 α