Elongation factor 3D structures: Difference between revisions
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*Elongin BC complex | *Elongin BC complex | ||
**[[1vcb]], [[8bdi]], [[8bdj]] – hEloBC + VHL<br /> | |||
**[[8ei3]] – hEloBC + VHL + peptide<br /> | |||
**[[1lqb]], [[1lm8]] – hEloBC + VHL + hypoxia inducible factor 1 α<br /> | **[[1lqb]], [[1lm8]] – hEloBC + VHL + hypoxia inducible factor 1 α<br /> | ||
**[[6i7q]], [[6i7r]] – hEloBC + VHL + hypoxia inducible factor 2 α<br /> | **[[6i7q]], [[6i7r]] – hEloBC + VHL + hypoxia inducible factor 2 α<br /> | ||
**[[7q2j]], [[8bb2]], [[8bb3]], [[8bb4]], [[8bb5]] – hEloBC + VHL + WD repeat-containing protein 5<br /> | **[[7q2j]], [[8bb2]], [[8bb3]], [[8bb4]], [[8bb5]] – hEloBC + VHL + WD repeat-containing protein 5<br /> | ||
**[[7jto]], [[7jtp]] – hEloBC + VHL + WD repeat-containing protein 5 + inhibitor<br /> | **[[7jto]], [[7jtp]] – hEloBC + VHL + WD repeat-containing protein 5 + inhibitor<br /> | ||
**[[7znt]] – hEloBC + VHL + | **[[7znt]], [[8bdx]] – hEloBC + VHL + BRD4<br /> | ||
**[[3zrc]], [[3ztc]], [[3ztd]], [[3zun]], [[4awj]], [[4b95]], [[4b9k]], [[4bks]], [[4bkt]], [[4w9l]], [[4w9k]], [[4w9j]], [[4w9i]], [[4w9h]], [[4w9g]], [[4w9f]], [[4w9e]], [[4w9d]], [[4w9c]], [[5nw2]], [[5nw1]], [[5nw0]], [[5nvz]], [[5nvy]], [[5nvx]], [[5nvw]], [[5nvv]], [[6fmi]], [[6fmj]], [[6fmk]], [[6gfy]], [[8c13]] - hEloBC + VHL + inhibitor<br /> | **[[8beb]], [[8ewv]] – hEloBC + VHL + BRD4 + ligand<br /> | ||
**[[8pc2]] – hEloBC + VHL + FKBP5<br /> | |||
**[[8fy0]], [[8fy1]], [[8fy2]] – hEloBC + VHL + Bcl-2<br /> | |||
**[[3zrc]], [[3ztc]], [[3ztd]], [[3zun]], [[4awj]], [[4b95]], [[4b9k]], [[4bks]], [[4bkt]], [[4w9l]], [[4w9k]], [[4w9j]], [[4w9i]], [[4w9h]], [[4w9g]], [[4w9f]], [[4w9e]], [[4w9d]], [[4w9c]], [[5nw2]], [[5nw1]], [[5nw0]], [[5nvz]], [[5nvy]], [[5nvx]], [[5nvw]], [[5nvv]], [[6fmi]], [[6fmj]], [[6fmk]], [[6gfy]], [[8bdl]], [[8bdm]], [[8bdn]], [[8bdo]], [[8c13]], [[8cqe]], [[8cqk]], [[8cql]], [[8p0f]], [[8qjs]], [[8zvj]], [[9bju]], [[9bol]], [[9gio]], [[9ipw]] - hEloBC + VHL + inhibitor<br /> | |||
**[[5t35]], [[6sis]] - hEloBC + VHL + BRD4<br /> | **[[5t35]], [[6sis]] - hEloBC + VHL + BRD4<br /> | ||
**[[7khh]] - hEloBC + VHL + BRD4 + inhibitor<br /> | **[[8qvu]] - hEloBC + VHL + Kras <br /> | ||
**[[7s4e]], [[7z6l]], [[7z76]], [[7z77]] - hEloBC + VHL + SMARCA2 + inhibitor<br / | **[[8qw6]], [[8qw7]] - hEloBC + VHL + Kras + inhibitor<br /> | ||
**[[7khh]], [[8bdt]] - hEloBC + VHL + BRD4 + inhibitor<br /> | |||
**[[8bds]] - hEloBC + VHL + BRD4 + inhibitor – Cryo EM<br /> | |||
**[[7s4e]], [[7z6l]], [[7z76]], [[7z77]], [[8g1q]] - hEloBC + VHL + SMARCA2 + inhibitor<br / | |||
**[[4wqo]] - hEloBC + VHL + cullin-2 <br /> | **[[4wqo]] - hEloBC + VHL + cullin-2 <br /> | ||
**[[6hr2]], [[6hay]], [[6hax]] - hEloBC + VHL + transcription activator <br /> | **[[6hr2]], [[6hay]], [[6hax]] - hEloBC + VHL + transcription activator <br /> | ||
**[[8qjr]] - hEloBC + VHL + transcription activator + inhibitor <br /> | |||
**[[4ajy]] - hEloBC + hypoxia inducible factor peptide <br /> | **[[4ajy]] - hEloBC + hypoxia inducible factor peptide <br /> | ||
**[[6gmr]], [[6gfx]], [[6bvb]] - hEloBC + VHL + hypoxia inducible factor peptide <br /> | **[[6gmr]], [[6gfx]], [[6bvb]] - hEloBC + VHL + hypoxia inducible factor peptide <br /> | ||
**[[8ebn]] - hEloBC + kelch domain-containing protein<br /> | |||
**[[8sh2]] - hEloBC + kelch domain-containing protein – Cryo EM<br /> | |||
**[[9d1i]], [[9d1y]], [[9d1z]] - hEloBC + ubiquitin + kelch domain-containing protein<br /> | |||
**[[5n4w]] - hEloBC + von-Hippel Lindau disease tumor suppressor + cullin-2 + RBX1<br /> | **[[5n4w]] - hEloBC + von-Hippel Lindau disease tumor suppressor + cullin-2 + RBX1<br /> | ||
**[[8ij1]], [[8wqg]], [[9j77]], [[9j78]] - hEloBC + cullin-2 + RBX1 + FEM-1 – Cryo EM<br /> | |||
**[[9j79]] - hEloBC + cullin-2 + RBX1 + FEM-1 + TOM20 – Cryo EM<br /> | |||
**[[9lky]] - hEloBC + cullin-2 + RBX1 + FEM-1 + choline phosphatase – Cryo EM<br /> | |||
**[[8jas]], [[8jau]], [[8jav]], [[8wqa]], [[8wqb]], [[8wqe]], [[8wqf]], [[8wqh]] - hEloBC + cullin-2 + RBX1 + FEM-1 + C-degron – Cryo EM<br /> | |||
**[[8jaq]], [[8jar]] - hEloBC + cullin-2 + RBX1 + APP + C-degron – Cryo EM<br /> | |||
**[[8je2]] - hEloBC + cullin-2 + folliculin-interacting protein + FEM-1 – Cryo EM<br /> | |||
**[[8je1]] - hEloBC + cullin-2 + BEX2 + FEM-1 – Cryo EM<br /> | |||
**[[8rwz]] - hEloBC + cullin-2 + RBX1 + BRD4 – Cryo EM<br /> | |||
**[[8wdk]] - hEloBC + VHL + cullin-2 + RBX1 + Wee – Cryo EM<br /> | |||
**[[8qu8]] - hEloBC + VHL + cullin-2 + RBX1 + Kras – Cryo EM<br /> | |||
**[[8q7r]] - hEloBC + cullin-2 + RBX1 + FEM-1 + ubiquitin + Nedd8 – Cryo EM<br /> | |||
**[[8r5h]] - hEloBC + cullin-2 + RBX1 + BRD4 + ubiquitin + ubiquitin conjugating enzyme – Cryo EM<br /> | |||
**[[8pql]] - hEloBC + cullin-2 + RBX1 + FEM-1 + polyubiquitin + ubiquitin conjugating enzyme E2 – Cryo EM<br /> | |||
**[[8rx0]] - hEloBC + cullin-2 + RBX1 + CDC34 + ubiquitin + Nedd8 – Cryo EM<br /> | |||
**[[8ol1]] - hEloBC + nucleosome + cGAMP synthase + SSB-3 – Cryo EM<br /> | |||
**[[4n9f]] - hEloBC + VIF+ cullin-5 + CBF<br /> | **[[4n9f]] - hEloBC + VIF+ cullin-5 + CBF<br /> | ||
**[[2ma9]] - hEloBC + VIF - NMR<br /> | **[[2ma9]] - hEloBC + VIF - NMR<br /> | ||
**[[3zrf]], [[5lli]], [[6gmx]], [[6gmq]], [[6gmn]], [[6gfz]] - hEloBC + VHL<br /> | **[[3zrf]], [[5lli]], [[6gmx]], [[6gmq]], [[6gmn]], [[6gfz]] - hEloBC + VHL<br /> | ||
**[[8vlb]] - hEloBC + VHL + CDO | |||
**[[8vl9]] - hEloBC + VHL + CDO + molecular glue | |||
**[[6zhc]] - hEloBC + VHL + Bcl-2-like protein<br /> | **[[6zhc]] - hEloBC + VHL + Bcl-2-like protein<br /> | ||
**[[2c9w]], [[2izv]], [[2jz3]], [[5bo4]] – hEloBC + suppressor of cytokine signaling<br /> | **[[2c9w]], [[2izv]], [[2jz3]], [[5bo4]] – hEloBC + suppressor of cytokine signaling<br /> | ||
**[[6c5x]], [[6i4x]], [[6i5n]], [[6i5j]] [[7m6t]] – hEloBC + suppressor of cytokine signaling + Gp130 peptide<br /> | **[[6c5x]], [[6i4x]], [[6i5n]], [[6i5j]] [[7m6t]] – hEloBC + suppressor of cytokine signaling + Gp130 peptide<br /> | ||
**[[7zlm]], [[7zln]], [[7zlo]], [[7zlp]], [[7zlr]], [[7zls]] – hEloBC + suppressor of cytokine signaling + ligand<br /> | |||
**[[6i5n]], [[6i5j]] – hEloBC + suppressor of cytokine signaling + growth hormone receptor peptide<br /> | **[[6i5n]], [[6i5j]] – hEloBC + suppressor of cytokine signaling + growth hormone receptor peptide<br /> | ||
**[[6i4x]] – hEloBC + suppressor of cytokine signaling + erythropoietin peptide<br /> | **[[6i4x]] – hEloBC + suppressor of cytokine signaling + erythropoietin peptide<br /> | ||
**[[6p59]] - hEloBC + virion infectivity factor + CBF b<br /> | **[[6p59]] - hEloBC + virion infectivity factor + CBF b<br /> | ||
**[[8fvi]], [[8fvj]] - hEloBC + virion infectivity factor + CBF beta – Cryo EM<br /> | |||
**[[7upn]] - hEloBC + virion infectivity factor + Ppiase – Cryo EM<br /> | |||
**[[8cx0]], [[8cx1]], [[8cx2]] - hEloBC + APOBEC + virion infectivity factor + CBF b + RNA – Cryo EM<br /> | |||
**[[8szk]] - hEloBC + PP2A+ virion infectivity factor + CBF b + RNA – Cryo EM<br /> | |||
**[[3zkj]] - hEloBC + ankyrin rep<br /> | **[[3zkj]] - hEloBC + ankyrin rep<br /> | ||
**[[ | **[[8y1u]] - hEloBC + ankyrin repeat + LZTS1 degron | ||
**[[3zng]] – hEloBC + ASB-9 <br /> | **[[3zng]] – hEloBC + ASB-9 <br /> | ||
**[[6v9h]] – hEloBC + creatine kinase + ASB-9 – Cryo EM<br /> | **[[6v9h]] – hEloBC + creatine kinase + ASB-9 – Cryo EM<br /> | ||
**[[6r6h]], [[6r7f]], [[6r7h]], [[6r7i]], [[6r7n]] – hEloBC in signalosome – Cryo EM<br /> | **[[6r6h]], [[6r7f]], [[6r7h]], [[6r7i]], [[6r7n]] – hEloBC in signalosome – Cryo EM<br /> | ||
**[[9d8p]] – hEloBC + kelch domain-containing protein + ubiquitin – Cryo EM<br /> | |||
**[[2fnj]] - mEloBC + GUSTAVUS | **[[2fnj]] - mEloBC + GUSTAVUS | ||
*Elongin ABC complex | |||
**[[8oew]] – hEloABC + RNA Pol II + RNA + DNA – Cryo EM<br /> | |||
*Negative EF | |||
**[[1x5p]], [[2bz2]], [[2jx2]] – hNELF-E RRM domain - NMR<br /> | |||
**[[5l3x]] – hNELF-A + hNELF-C/D <br /> | |||
**[[8jj6]] – hNELF-B + hNELF-C/D + hNELF-E <br /> | |||
**[[6gml]], [[8uha]], [[8uhd]], [[8uhg]], [[8uis]] – hNELF-F in Pol II complex – Cryo EM <br /> | |||
**[[8ui0]], [[8w8e]] – hNELF-A + hNELF-B + hNELF-C/D + hNELF-E in Pol II complex – Cryo EM <br /> | |||
**[[8uhg]] – hNELF-A + hNELF-B + hNELF-C/D + hNELF-E + Spt5 in Pol II complex – Cryo EM <br /> | |||
**[[8rbx]], [[9j0n]], [[9j0o]], [[9j0p]] – hNELF-A + hNELF-B + hNELF-C/D + hNELF-E in Pol II complex + nucleosome – Cryo EM <br /> | |||
}} | }} | ||
[[Category:Topic Page]] | [[Category:Topic Page]] | ||
Revision as of 10:35, 20 May 2025
3D structures of elongation factor
Updated on 20-May-2025
- Elongin C
- Elongin BC complex
- 1vcb, 8bdi, 8bdj – hEloBC + VHL
- 8ei3 – hEloBC + VHL + peptide
- 1lqb, 1lm8 – hEloBC + VHL + hypoxia inducible factor 1 α
- 6i7q, 6i7r – hEloBC + VHL + hypoxia inducible factor 2 α
- 7q2j, 8bb2, 8bb3, 8bb4, 8bb5 – hEloBC + VHL + WD repeat-containing protein 5
- 7jto, 7jtp – hEloBC + VHL + WD repeat-containing protein 5 + inhibitor
- 7znt, 8bdx – hEloBC + VHL + BRD4
- 8beb, 8ewv – hEloBC + VHL + BRD4 + ligand
- 8pc2 – hEloBC + VHL + FKBP5
- 8fy0, 8fy1, 8fy2 – hEloBC + VHL + Bcl-2
- 3zrc, 3ztc, 3ztd, 3zun, 4awj, 4b95, 4b9k, 4bks, 4bkt, 4w9l, 4w9k, 4w9j, 4w9i, 4w9h, 4w9g, 4w9f, 4w9e, 4w9d, 4w9c, 5nw2, 5nw1, 5nw0, 5nvz, 5nvy, 5nvx, 5nvw, 5nvv, 6fmi, 6fmj, 6fmk, 6gfy, 8bdl, 8bdm, 8bdn, 8bdo, 8c13, 8cqe, 8cqk, 8cql, 8p0f, 8qjs, 8zvj, 9bju, 9bol, 9gio, 9ipw - hEloBC + VHL + inhibitor
- 5t35, 6sis - hEloBC + VHL + BRD4
- 8qvu - hEloBC + VHL + Kras
- 8qw6, 8qw7 - hEloBC + VHL + Kras + inhibitor
- 7khh, 8bdt - hEloBC + VHL + BRD4 + inhibitor
- 8bds - hEloBC + VHL + BRD4 + inhibitor – Cryo EM
- 7s4e, 7z6l, 7z76, 7z77, 8g1q - hEloBC + VHL + SMARCA2 + inhibitor<br /
- 4wqo - hEloBC + VHL + cullin-2
- 6hr2, 6hay, 6hax - hEloBC + VHL + transcription activator
- 8qjr - hEloBC + VHL + transcription activator + inhibitor
- 4ajy - hEloBC + hypoxia inducible factor peptide
- 6gmr, 6gfx, 6bvb - hEloBC + VHL + hypoxia inducible factor peptide
- 8ebn - hEloBC + kelch domain-containing protein
- 8sh2 - hEloBC + kelch domain-containing protein – Cryo EM
- 9d1i, 9d1y, 9d1z - hEloBC + ubiquitin + kelch domain-containing protein
- 5n4w - hEloBC + von-Hippel Lindau disease tumor suppressor + cullin-2 + RBX1
- 8ij1, 8wqg, 9j77, 9j78 - hEloBC + cullin-2 + RBX1 + FEM-1 – Cryo EM
- 9j79 - hEloBC + cullin-2 + RBX1 + FEM-1 + TOM20 – Cryo EM
- 9lky - hEloBC + cullin-2 + RBX1 + FEM-1 + choline phosphatase – Cryo EM
- 8jas, 8jau, 8jav, 8wqa, 8wqb, 8wqe, 8wqf, 8wqh - hEloBC + cullin-2 + RBX1 + FEM-1 + C-degron – Cryo EM
- 8jaq, 8jar - hEloBC + cullin-2 + RBX1 + APP + C-degron – Cryo EM
- 8je2 - hEloBC + cullin-2 + folliculin-interacting protein + FEM-1 – Cryo EM
- 8je1 - hEloBC + cullin-2 + BEX2 + FEM-1 – Cryo EM
- 8rwz - hEloBC + cullin-2 + RBX1 + BRD4 – Cryo EM
- 8wdk - hEloBC + VHL + cullin-2 + RBX1 + Wee – Cryo EM
- 8qu8 - hEloBC + VHL + cullin-2 + RBX1 + Kras – Cryo EM
- 8q7r - hEloBC + cullin-2 + RBX1 + FEM-1 + ubiquitin + Nedd8 – Cryo EM
- 8r5h - hEloBC + cullin-2 + RBX1 + BRD4 + ubiquitin + ubiquitin conjugating enzyme – Cryo EM
- 8pql - hEloBC + cullin-2 + RBX1 + FEM-1 + polyubiquitin + ubiquitin conjugating enzyme E2 – Cryo EM
- 8rx0 - hEloBC + cullin-2 + RBX1 + CDC34 + ubiquitin + Nedd8 – Cryo EM
- 8ol1 - hEloBC + nucleosome + cGAMP synthase + SSB-3 – Cryo EM
- 4n9f - hEloBC + VIF+ cullin-5 + CBF
- 2ma9 - hEloBC + VIF - NMR
- 3zrf, 5lli, 6gmx, 6gmq, 6gmn, 6gfz - hEloBC + VHL
- 8vlb - hEloBC + VHL + CDO
- 8vl9 - hEloBC + VHL + CDO + molecular glue
- 6zhc - hEloBC + VHL + Bcl-2-like protein
- 2c9w, 2izv, 2jz3, 5bo4 – hEloBC + suppressor of cytokine signaling
- 6c5x, 6i4x, 6i5n, 6i5j 7m6t – hEloBC + suppressor of cytokine signaling + Gp130 peptide
- 7zlm, 7zln, 7zlo, 7zlp, 7zlr, 7zls – hEloBC + suppressor of cytokine signaling + ligand
- 6i5n, 6i5j – hEloBC + suppressor of cytokine signaling + growth hormone receptor peptide
- 6i4x – hEloBC + suppressor of cytokine signaling + erythropoietin peptide
- 6p59 - hEloBC + virion infectivity factor + CBF b
- 8fvi, 8fvj - hEloBC + virion infectivity factor + CBF beta – Cryo EM
- 7upn - hEloBC + virion infectivity factor + Ppiase – Cryo EM
- 8cx0, 8cx1, 8cx2 - hEloBC + APOBEC + virion infectivity factor + CBF b + RNA – Cryo EM
- 8szk - hEloBC + PP2A+ virion infectivity factor + CBF b + RNA – Cryo EM
- 3zkj - hEloBC + ankyrin rep
- 8y1u - hEloBC + ankyrin repeat + LZTS1 degron
- 3zng – hEloBC + ASB-9
- 6v9h – hEloBC + creatine kinase + ASB-9 – Cryo EM
- 6r6h, 6r7f, 6r7h, 6r7i, 6r7n – hEloBC in signalosome – Cryo EM
- 9d8p – hEloBC + kelch domain-containing protein + ubiquitin – Cryo EM
- 2fnj - mEloBC + GUSTAVUS
- 1vcb, 8bdi, 8bdj – hEloBC + VHL
- Elongin ABC complex
- 8oew – hEloABC + RNA Pol II + RNA + DNA – Cryo EM
- 8oew – hEloABC + RNA Pol II + RNA + DNA – Cryo EM
- Negative EF
- 1x5p, 2bz2, 2jx2 – hNELF-E RRM domain - NMR
- 5l3x – hNELF-A + hNELF-C/D
- 8jj6 – hNELF-B + hNELF-C/D + hNELF-E
- 6gml, 8uha, 8uhd, 8uhg, 8uis – hNELF-F in Pol II complex – Cryo EM
- 8ui0, 8w8e – hNELF-A + hNELF-B + hNELF-C/D + hNELF-E in Pol II complex – Cryo EM
- 8uhg – hNELF-A + hNELF-B + hNELF-C/D + hNELF-E + Spt5 in Pol II complex – Cryo EM
- 8rbx, 9j0n, 9j0o, 9j0p – hNELF-A + hNELF-B + hNELF-C/D + hNELF-E in Pol II complex + nucleosome – Cryo EM
- 1x5p, 2bz2, 2jx2 – hNELF-E RRM domain - NMR