ATPase 3D structures: Difference between revisions

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**[[9gqo]] - LmATPase + Ca – Cryo EM<br />
**[[9gqo]] - LmATPase + Ca – Cryo EM<br />


“Zn+2 ATPase''
*“Zn+2 ATPase''


**[[2ofg]], [[2ofh]] - sATPase N-terminal – NMR<br />
**[[2ofg]], [[2ofh]] - sATPase N-terminal – NMR<br />
**[[4umw]], [[4umv]] - ATPase +Mg – Shigella sonni<br />
**[[4umw]], [[4umv]] - ATPase +Mg – Shigella sonni<br />


“Cd+2 ATPase''
*“Cd+2 ATPase''


**[[7qbz]], [[7qc0]] - ATPase – Sulfitobacter<br />
**[[7qbz]], [[7qc0]] - ATPase – Sulfitobacter<br />

Revision as of 08:30, 24 November 2024

3D Structures of ATPase

ATPase 3D structures

Updated on 24-November-2024 

**2r31, 2p4x – PdATPase ATP12
    • 2zd2 – PdATPase (mutant) ATP12
    • 1d8s – EcATPase F1
    • 1vdz – PhATPase subunit A – Pyrococcus horikoshii
    • 3md0 – MtATPase+GDP
  • Monosaccharide transporting ATPase
    • 5dte – AsATPase – Actinobacillus succinogenes
    • 4zjp – AsATPase + ribopyranose
  • Phospholipid transporting ATPase
  • Polyamine transporting ATPase
  • RNA-dependent ATPase
    • 3eaq, 3i31, 3i32 – TtATPase fragment
    • 4kbg, 4kbf - TtATPase helicase core domain
    • 5mao - TtATPase RRM domain
    • 4i69, 4i68 - TtATPase RRM domain (mutant)
    • 4i67 - TtATPase RRM domain + RNA
    • 3mwj – TtATPase N-terminal (mutant)
    • 3mwk, 3nbf – TtATPase N-terminal + 8-oxo-AMP
    • 3mwl - TtATPase N-terminal (mutant) + 8-oxoadenine
    • 3nej - TtATPase reca-like domain (mutant)
  • DNA-dependent ATPase
    • 5tnu - ATPase – Sulfolobus tokodaii
    • 6p4o, 6p4w - ATPase + endonuclease BAX1 – Sulfurisphaera tokodaii
  • Proteasome-associated ATPase
    • 7qxu – hATPase in proteasome – Cryo EM
    • 8d6v, 8d6w – MtATPase subunits alpha, beta – Cryo EM
    • 7pxc – MtATPase subunits alpha, beta + Pup – Cryo EM
    • 3fp9, 3m9b, 3m9h – MtATPase intern domain
    • 3m91, 3m9d - MtATPase coiled coil domain + protein PUP
    • 5kzf – MtATPase residues 98-609
    • 5kwa – MtATPase residues 22-529
    • 6kww – ATPase subunit HsIU – Staphylococcus aureus
    • 5txv – EcATPase subunit HslU
    • 6pxk, [[[6pxl|6pxl]], 6pxx – EcATPase subunit HsIU + ADP
    • 5ji3, 5ji2 – EcATPase subunits HslU+HslV
    • 6pxi – EcATPase subunit HsIU+HsIV + ADP
    • 2wfw – ATPase substrate recognition domain – Rhodococcus erythropolis
    • 7mhb – ATPase subunit HsIU + ADP – Brucella abortus
  • Transitional endoplasmic reticulum ATPase residues 1-806
    • 7r7u – hTer-ATPase – Cryo EM
    • 5c19 – hTer-ATPase (mutant)
    • 8pqx, 8r0e, 8rs9 – hTer-ATPase (mutant) – Cryo EM
    • 5ftn, 5ftm, 5ftl, 5ftk, 5ftj – hTer-ATPase + ATPGS
    • 7vcs, 7vcv, 7vcx – hTer-ATPase + ATPGS – Cryo EM
    • 5c18 – hTer-ATPase (mutant) + ATPGS
    • 7rl7, 7rla, 7rlc, 7rlf, 7rlh – hTer-ATPase (mutant) + ATPGS – Cryo EM
    • 7rlj – hTer-ATPase (mutant) + ATPGS + inhibitor – Cryo EM
    • 7rli – hTer-ATPase + ADP + inhibitor – Cryo EM
    • 7wub, 8ooi, 8rsb – hTer-ATPase + ADP – Cryo EM
    • 7rl6, 7rl9, 7rlb, 7rld, 7rlg, 8rsc – hTer-ATPase (mutant) + ADP – Cryo EM
    • 7vct, 7vcu – hTer-ATPase + ATPGS + ADP – Cryo EM
    • 8fcl, 8fcm, 8fcn, 8fco, 8fcp, 8fcq, 8fcr, 8fct – hTer-ATPase + UBXD1 + ADP – Cryo EM
    • 7y4w, 7y53, 7y59 – hTer-ATPase + derlin + ADP – Cryo EM
    • 8b5r – hTer-ATPase + P37 + SPI – Cryo EM
    • 5c1b - hTer-ATPase + UFD1--SHP peptide
    • 5ifw, 5ifs - hTer-ATPase + tether containing UBX domain
    • 6mck - hTer-ATPase + inhibitor
    • 8uv2, 8uvp, 9boq - hTer-ATPase + inhibitor – Cryo EM
    • 8uvq - hTer-ATPase (mutant) + inhibitor – Cryo EM
    • 8uvo - hTer-ATPase (mutant) + ADP + inhibitor – Cryo EM
    • 6hd0 - hTer-ATPase + PUX1 + ADP
    • 8hl7 - hTer-ATPase + N-Lys methyltransferase + SAH + ADP
    • 8yka - hTer-ATPase + deubiquitinqting protein – Cryo EM
    • 7r7s - hTer-ATPase + p47 – Cryo EM
    • 7r7t - hTer-ATPase + p47 + ADP – Cryo EM
  • Transitional endoplasmic reticulum ATPase residues 1-480
    • 3hu1, 3hu2, 3hu3 – hTer-ATPase + ATPGS
    • 4ko8, 4kln, 5dyg – hTer-ATPase (mutant) + ATPGS
    • 5dyi – hTer-ATPase + ADP
    • 4kod – hTer-ATPase (mutant) + ADP
    • 5kiy, 5kiw - hTer-ATPase (mutant) + Selenoprotein S
    • 8kg2 – hTer-ATPase (mutant) + FAS-associated factor
    • 8hrz – hTer-ATPase (mutant) + P47 UBX domain
  • Transitional endoplasmic reticulum ATPase residues 1-200
    • 3qc8, 3qq8, 3qwz - hTer-ATPase + FAS-associated factor 1
    • 3qq7 - hTer-ATPase
    • 3tiw - hTer-ATPase + E3 ubiquitin-protein ligase peptide
    • 5glf - hTer-ATPase + derlin-1 peptide
    • 5epp - hTer-ATPase N + rhomboid-related protein 4 peptide
    • 4kdl, 4kdi - hTer-ATPase + ubiquitin thioesterase OTU1
    • 5b6c - hTer-ATPase + ubiquitin fusion degradation protein
    • 5x4l - hTer-ATPase + UBX domain-containing protein
    • 1s3s - mTer-ATPase ND1 domain + P47 C terminal
    • 4rv0 - Ter-ATPase N terminal + nuclear protein localization protein – Drosophila melanogaster
  • Transitional endoplasmic reticulum ATPase D2 domain residues 462-764
  • Sarcoplasmic/endoplasmic reticulum ATPase
  • LAO/AO transport system ATPase
    • 3nxs – MsATPase + GDP
    • 6cum – MsATPase
  • DNA double-strand repair ATPase (Rad50)
    • 3aux – MjRad50 – Methanocaldococcus jannaschii
    • 3auy - MjRad50 + ADP
    • 3av0 - MjRad50 + ATP
    • 5f3w - MjRad50 + MRE11 + ATPGS
    • 5dny - MjRad50 + MRE11 + DNA
    • 3qg5 – TmRad50 NBD + MRE11
    • 3qkr, 3qks, 3qf7 - PfRad50 NBD + MRE11 – Pyrococcus furiosus
    • 4nck, 4nci, 4nch - PfRad50 NBD (mutant)
    • 4ncj - PfRad50 NBD (mutant) + BeF3 + ADP
    • 3qkt - PfRad50 NBD + AMPPNP
    • 3qku - PfRad50 NBD + AMPPNP + MRE11
  • MipZ ATPase
    • 2xit, 2xj4 – CcMipZ – Caulobacter crescentus
    • 2xj9 – CcMipZ (mutant)
  • ATPase Rava
    • 5fl2, 4upf – EcATPase LARA domain + lysine decarboxylase
    • 4upb, 6q7l, 6q7m – EcATPase + lysine decarboxylase – Cryo EM
    • 3nbx – EcATPase Rava + ADP
    • 6sza, 6szb – EcATPase Rava + ADP – Cryo EM
  • FlaI ATPase
    • 4ihq, 4ii7 – ATPase (mutant) – Sulfolobus acidocaldarius
  • Vescicle-fusing ATPase
    • 6mdm, 6mdn – haATPase + SNAP-25 + syntaxin-1A + VAMP-2 + NSF attachment protein – hamster – Cryo EM
    • 6mdo, 6mdp – haATPase + SNAP-25 – Cryo EM
  • ATPase Invc
    • 6sdx – ATPase – Salmonella enterica
  • ATPase in ribosome
    • 6tmf – ATPase – Thermococcus celer
  • P5A-type ATPase
  • ATPase SpaL/MxiB
  • Plasma membrane ATPase
  • Peroxisomal ATPase
    • 8u0x – yPex6 N1 domain 1-184
    • 8u0v – yPex1 + Pex6 – Cryo EM
    • 8c0v, 8c0w – yPex1 + Pex6 (mutant) + peptide + ADP + ATP – Cryo EM
  • Archaeal ATPase
  • Ino80 ATPase or chromatin-remodeling ATPase
  • ATPase synthesizing ATP or ATP synthase
  • V-ATPS subunit A
  • V-ATPS subunit B
  • V-ATPS subunit C
    • 3v3c – ATPS subunit C – pea
    • 4mjn - F1-ATPS - wheat
    • 2w5j, 6tqj – sF1-ATPS - spinach
    • 3u2f, 3u2y, 3u32, 3ud0 - yATPS subunit C
    • 1ijp, 1l6t – EcF1-ATPS subunit C (mutant) - NMR
    • 4utq – EcF1-ATPS membrane domain + insertase YIDC – Cryo EM
    • 3lg8 - MjATPS subunit C C-terminal
    • 2wie, 2xqs, 2xqt, 2xqu - ATPS subunit C – Arthrospira platensis
    • 3zk1, 3zk2 - ATPS subunit C
    • 7wem – BaF1-ATPS subunit C - NMR
    • 4bem - F1F0-ATPS – Acetobacterium woodii
  • V-ATPS subunit E
    • 2dm9, 2dma - PhATPS subunit E
    • 4dt0 – PhATPS subunit E
    • 2kk7 - MjATPS subunit E N-terminal – NMR
  • V-ATPS subunit F
    • 2ov6 - MmATPS subunit F - NMR
    • 2d00 - TtATPS subunit F
    • 2qai - PfATPS subunit F
    • 2i4r - AfATPS subunit F
  • F1F0 ATPS α subunit
    • 2r9v - F1-ATPS – Thermotoga maritima
  • F1F0 ATPS β subunit
    • 1pyv - F1-ATPS – NMR – tobacco
    • 1b9u – EcF1-ATPS membrane domain – NMR
    • 1l2p – EcF1-ATPS dimerization domain
    • 2khk - EcF1-ATPS fragment – NMR
    • 4q4l - F1-ATPS – Burkholderia thailandensis
  • F1F0 ATPS γ subunit
    • 1wu0 – BaATPS – NMR
    • 1a91, 1c0v, 1aty, 1c99 – EcF1-ATPS – NMR
    • 2wgm – ItF0-ATPS – Ilyobacter tartaricus
    • 4v1g – MpF0F1-ATPS – Mycobacterium phlei
    • 4v1f, 4v1h – MpF0-ATPS + drug
    • 2x2v, 4cbk, 4cbj – BpF0-ATPS – Bacillus pseudofirmus
    • 3zo6 – BpF0-ATPS (mutant)
  • F1F0 ATPS δ subunit
    • 1abv – EcF1-ATPS N terminal – NMR
  • F1F0 ATPS ε subunit
    • 1aqt – EcF1-ATPS (mutant)
    • 1bsh, 1bsn – EcF1-ATPS – NMR
    • 2e5t, 2e5u – BaF1-ATPS C terminal – NMR
    • 2e5y – BaF1-ATPS
    • 6pi4 – MsF1-ATPS
    • 7vil, 7xkz – F1-ATPS – Mycobacterium abscessus - NMR
    • 5yio – MtF1-ATPS+GDP – Mycobacterium tuberculosis - NMR
  • F1F0 ATPS α,b subunits
    • 8spv – BaF1-ATPS – Cryo EM
    • 8spx – BaF1-ATPS + ATP – Cryo EM
    • 8spw – BaF1-ATPS + ATP + ADP – Cryo EM
  • F1F0 ATPS α,γ subunits
    • 1c17 – EcF1-ATPS – NMR
    • 8j58, 8jr1 – MtF1-ATPS – Cryo EM
    • 8j57 – MtF1-ATPS + drug – Cryo EM
  • F1F0 ATPS β,δ subunits
    • 8h9g, 8h9n – hF1-ATPS + ATPS coupling factor – Cryo EM
    • 2cly – bF1-ATPS + ATPS coupling factor
  • F1F0 ATPS γ,ε subunits
  • F1F0 ATPS α,β,γ,δ subunits
    • 1qo1- yF1-ATPS + protein 9
  • F1F0 ATPS α,β,γ subunits
    • 9avj - BaF1-ATPS + ANP – Cryo EM
    • 8u1h - BaF1-ATPS (mutant) + ANP + ADP – Cryo EM

Proteopedia Page Contributors and Editors (what is this?)

Michal Harel, Joel L. Sussman, Openfox

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