ATPase 3D structures: Difference between revisions
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Michal Harel (talk | contribs) New page: == 3D Structures of ATPase == ATPase 3D structures Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}} {{#tree:id=OrganizedByTopic|openlevels=0| *'''F-ATPase... |
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Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}} | Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}} | ||
{{#tree:id=OrganizedByTopic|openlevels=0| | {{#tree:id=OrganizedByTopic|openlevels=0| | ||
*'''ATPase hydrolysing ATP''' | |||
*''' | |||
*''F1F0 ATPase α subunit'' | *''F1F0 ATPase α subunit'' | ||
**[[2jmx]] - bF1-ATPase+subunit O - bovine<br /> | |||
**[[2jmx]] - bF1- | |||
**[[6foc]] – MsF-ATPase – ''Mycobacterium smegmatis''<br /> | **[[6foc]] – MsF-ATPase – ''Mycobacterium smegmatis''<br /> | ||
*''F1F0 ATPase ε subunit'' | *''F1F0 ATPase ε subunit'' | ||
**[[2rq6]], [[2rq7]] - TeF1-ATPase – ''Thermosynechococcus elongatus''<br /> | |||
**[[2rq6]], [[2rq7]] - TeF1- | **[[8hgx]] – AbATPS – ''Acinetobacter baumannii'' – NMR<br /> | ||
**[[ | *''F1F0 ATPase zeta subunit'' | ||
**[[7vkv]] - F1-ATPase – ''Sinorhizobium meliloti'' - NMR<br /> | |||
* | |||
**[[ | |||
*''F1F0 ATPase α, β subunits'' | *''F1F0 ATPase α, β subunits'' | ||
**[[1sky]] – BaF1-ATPase – ''Bacillus'' <br /> | |||
**[1sky]] – | |||
**[[5cdf]] – PdATPase - ''Paracoccus denitrificans''<br /> | **[[5cdf]] – PdATPase - ''Paracoccus denitrificans''<br /> | ||
*''F1F0 ATPase α, δ subunits'' | *''F1F0 ATPase α, δ subunits'' | ||
**[[2a7u]] – EcF1-ATPase N termini – ''Escherichia coli'' - NMR<BR /> | |||
**[[2a7u]] – EcF1- | |||
*''F1F0 ATPase γ, ε subunits'' | *''F1F0 ATPase γ, ε subunits'' | ||
**[[5zwl]] – TeF1-ATPase<br /> | |||
**[[5zwl]] – TeF1- | |||
*''F1F0 ATPase α, β, γ subunits'' | *''F1F0 ATPase α, β, γ subunits'' | ||
**[[1ohh]], [[2jiz]], [[4tt3]], [[4tsf]], [[4z1m]] – bF1-ATPase + IF1 inhibitor <br /> | |||
**[[1ohh]], [[2jiz]], [[4tt3]], [[4tsf]], [[4z1m]] – bF1- | **[[1e1q]], [[2w6e]], [[2w6f]], [[2w6g]], [[2w6h]], [[2w6i]], [[2w6j]] - bF1-ATPase<br /> | ||
**[[1e1q]], [[2w6e]], [[2w6f]], [[2w6g]], [[2w6h]], [[2w6i]], [[2w6j]] - bF1- | **[[1e1r]] - bF1-ATPase +Mg+ADP+AlF4<br /> | ||
**[[1e1r]] - bF1- | **[[1w0j]], [[1w0k]] - bF1-ATPase +BeF3<br /> | ||
**[[1w0j]], [[1w0k]] - bF1- | **[[1nbm]] - bF1-ATPase +nitrobenzofurazan<br /> | ||
**[[1nbm]] - bF1- | **[[1mab]], [[2f43]] - rF1-ATPase – rat<br /> | ||
**[[1mab]], [[2f43]] - | **[[8hh1]], [[8hh2]], [[8hh3]], [[8hh4]], [[8hh5]], [[8hh6]], [[8hh7]], [[8hh8]], [[8hh9]], [[8hha]], [[8hhb]], [[8hhc]] - BaF1-ATPase – Cryo EM<br /> | ||
*”F1F0 ATPase α,β,γ,ε subunits” | |||
* | **[[1jnv]] - EcF1-ATPase <br /> | ||
**[[2qe7]], [[4xd7]] – BaF1-ATPase <br /> | |||
**[[5ik2]], [[5hkk]] – F1-ATPase – ''Cakdalkalibacillus thermarum''<br /> | |||
**[[6foc]] – MsF-ATPase<br /> | |||
* | **[[6q45]] – FnF1-ATPase – ''Fusobacterium nucleatum''<br /> | ||
**[[7yry]], [[8zi0]], [[8zi1]], [[8zi2]], [[8zi3]] – AbATPS + ADP + ATP – Cryo EM<br /> | |||
**[[1jnv]] - EcF1- | |||
**[[ | |||
**[[ | |||
**[[ | |||
**[[ | |||
*''F1F0 ATPase α, β, γ, δ, ε subunits'' | *''F1F0 ATPase α, β, γ, δ, ε subunits'' | ||
**[[4asu]], [[2jdi]], [[2jj1]], [[2jj2]] - bF1-ATPase<br /> | |||
**[[4asu]], [[2jdi]], [[2jj1]], [[2jj2]] - bF1- | **[[2v7q]], [[1e79]], [[2ck3]] - bF1-ATPase +inhibitor<br /> | ||
**[[2v7q]], [[1e79]], [[2ck3]] - bF1- | **[[4yxw]] - bF1-ATPase + ANP<br /> | ||
**[[4yxw]] - bF1- | **[[3oe7]], [[3oee]], [[3oeh]], [[3ofn]] - yF1-ATPase (mutant) - yeast<br /> | ||
**[[3fks]] - yF1-ATPase<br /> | |||
**[[3zia]] - yF1-ATPase + inhibitor protein<br /> | |||
**[[3oe7]], [[3oee]], [[3oeh]], [[3ofn]] - yF1- | **[[6f5d]] - TbF1-ATPase + ribonucleoprotein P18 – ''Trypanosoma brucei''<br /> | ||
**[[3fks | *''F1F0 ATPase multiple subunits'' | ||
**[[3zia]] - yF1- | **[[8h9j]], [[8h9l]], [[8h9u]] - hF1-ATPase – Cryo EM | ||
**[[6f5d]] - | **[[1bmf]] - bF1-ATPase<br /> | ||
**[[3dze]] – bF1-ATPase subunit S<br /> | |||
**[[1cow]] - bF1-ATPase +aurovertin B<br /> | |||
*''F1F0 ATPase | |||
**[[ | |||
**[[1bmf]] - bF1- | |||
**[[3dze]] – bF1- | |||
**[[1cow]] - bF1- | |||
**[[4f4s]] – yATPase subunit 9 + oligomycin <br /> | **[[4f4s]] – yATPase subunit 9 + oligomycin <br /> | ||
**[[8ap6]], [[8ap7]], [[8aph]], [[8apb]] - TbF1-ATPase – Cryo EM | |||
**[[7y5a]], [[7y5b]], [[7y5c]], [[7y5d]] - MsF1-ATPase – Cryo EM | |||
*V-ATPase | |||
*''V-ATPase subunit A'' | *''V-ATPase subunit A'' | ||
**[[7uzg]], [[7uzh]], [[7uzi]], [[7uzk]] - rATPase + SidK – Cryo EM | |||
**[[5i1m]] – yATPase <br /> | **[[5i1m]] – yATPase <br /> | ||
**[[ | **[[6hh0]] – yATPase helix 7 - NMR<br /> | ||
**[[4o1s]] - ATPase subunit A – ''Thermoplasma volcanium''<br /> | |||
**[[7qsu]] – ATPase – ''Thermococcus litoralis'' <br /> | |||
**[[4o1s]] - | |||
**[[ | |||
*''V-ATPase subunit B'' | *''V-ATPase subunit B'' | ||
**[[2c61]] - MmATPase subunit B – ''Methanosarcina mazei''<br /> | |||
**[[2c61]] - | |||
*''V-ATPase subunit C'' | *''V-ATPase subunit C'' | ||
**[[1u7l]] - yATPase subunit C<br /> | |||
**[[1r5z]], [[1v9m]] - TtATPase subunit C – ''Thermus thermophilus''<br /> | |||
**[[1u7l | |||
**[[1r5z]], [[1v9m]] - | |||
*''V-ATPase subunit D+F'' | *''V-ATPase subunit D+F'' | ||
**[[4rnd]] – yATPase subunit D+F<br /> | **[[4rnd]] – yATPase subunit D+F<br /> | ||
*''V-ATPase subunit E'' | *''V-ATPase subunit E'' | ||
**[[2kz9]] – yATPase subunit E<br /> | **[[2kz9]] – yATPase subunit E<br /> | ||
**[[3v6i]] – TtATPase subunit E + VAPC<br /> | |||
**[[3v6i]] – | |||
*''V-ATPase subunit F'' | *''V-ATPase subunit F'' | ||
**[[4ix9]] – yATPase subunit F (mutant)<br /> | |||
**[[4ix9]] – | |||
*''V-ATPase subunit G'' | *''V-ATPase subunit G'' | ||
**[[2k88]] - yATPase subunit G residues 2-58 - NMR<br /> | |||
**[[2k88]] - | **[[2kwy]] - yATPase subunit G residues 61-101 - NMR<br /> | ||
**[[2kwy]] - | |||
*''V-ATPase subunit H'' | *''V-ATPase subunit H'' | ||
**[[1ho8]] – yATPase subunit H <br /> | |||
**[[1ho8]] – | |||
*''V-ATPase subunit K'' | *''V-ATPase subunit K'' | ||
**[[2bl2]], [[2cyd]] - EhATPase subunit K – ''Enterococcus hirae''<br /> | |||
**[[2bl2]], [[2cyd]] - | |||
*''V-ATPase subunit I'' | *''V-ATPase subunit I'' | ||
**[[3rrk]] – ATPase subunit I N terminal – ''Meiothermus ruber''<br /> | |||
**[[3rrk]] – | **''V-ATPase multi subunits'' | ||
**[[6wlw]] – hATPase – human - Cryo EM <br /> | |||
*''V-ATPase multi subunits'' | **[[6wlz]], [[6wm2]], [[6wm3]], [[6wm4]] – hATPase + ADP – Cryo EM <br /> | ||
**[[7u4t]], [[7unf]] – hATPase + MTOR – Cryo EM <br /> | |||
**[[6xbw]], [[6xby]] – bATPase – Cryo EM <br /> | |||
**[[7khr]] – bATPase + antibiotics – Cryo EM <br /> | |||
**[[7une]] – bATPase + MTOR – Cryo EM <br /> | |||
**[[7u8o]], [[7u8p]], [[7u8q]], [[7u8r]] – pATPase – Cryo EM <br /> | |||
**[[9b8q]] - rATPS subunit A,C,E,G,H – Cryo EM<br /> | |||
**[[9b8o]], [[9b8p]] – rATPS + SidK + synaptophysin – Cryo EM<br /> | |||
**[[6vq6]], [[6vq7]], [[6vq8]] - rATPS subunit A,B,C,D,E,E2, F,G,K, S1 + effector + renin receptor – Cryo EM<br /> | |||
**[[6vq9]], [[6vqa]], [[6vqb]] - rATPS subunit A,B,D,E,E2,G,H + effector – Cryo EM<br /> | |||
**[[6vqc]], [[6vqg]], [[6vqh]] - rATPS subunit A,B,D,E2, F, S1 + renin receptor + RNase K – Cryo EM<br /> | |||
**[[6vqi]], [[6vqj]], [[6vqk]] - rATPS subunit A,C1,E1,G – Cryo EM<br /> | |||
**[[9brs]], [[9bru]], [[9bry]], [[9brz]] – mATPase - Cryo EM <br /> | |||
**[[7uw9]], [[7uwa]], [[7uwb]], [[7uwc]], [[7uwd]] – ATPase - lemon – Cryo EM<br /> | |||
**[[7fda]], [[7fdb]], [[7fdc]], [[7fde]], [[7tmm]], [[7tmo]], [[7tmp]], [[7tmq]], [[7tmr]], [[7tms]], [[7tmt]] – yATPase – Cryo EM<br /> | |||
**[[7tao]], [[7tap]] – yATPase + antibiotics – Cryo EM<br /> | |||
**[[4dl0]], [[4efa]] - yATPase subunits C,G,E<br /> | **[[4dl0]], [[4efa]] - yATPase subunits C,G,E<br /> | ||
**[[3w3a]] - | **[[3w3a]] - yATPase subunit A,B,D,F<br /> | ||
**[[5tj5]] - | **[[5tj5]] - yATPase subunit A,C,C’,C’’,D,E,F<br /> | ||
**[[5voz]], [[5voy]], [[5vox]] - | **[[5voz]], [[5voy]], [[5vox]] - yATPase subunit A,C,C’,C’’,D,E,F,H – Cryo EM<br /> | ||
**[[6c6l]] - | **[[6c6l]] - yATPase subunit A,C,C’,C’’,D,E,F + V0 assembly protein 1<br /> | ||
**[[5bw9]] - | **[[6o7t]], [[6m0r]], [[6m0s]] - yATPase subunit A,C,C’,C’’,E + V0 assembly protein 1 – Cryo EM<br /> | ||
**[[5d80]] - | **[[6o7u]] - yATPase subunit C,C’,C’’,D,E + V0 assembly protein 1 – Cryo EM<br /> | ||
**[[3a5c]], [[3a5d]] - | **[[6o7v]], [[6o7w]], [[6o7x]] - yATPase subunit A,B,C,C’,C’’,D,E,F,G,H + V0 assembly protein 1 – Cryo EM<br /> | ||
**[[5tsj]] - | **[[6pe4]], [[6pe5]] - yATPase subunit A,C,C’,C’’,D,E + V0 assembly protein 1 + cation transporter – Cryo EM<br /> | ||
**[[5gas]], [[5gar]] - | **[[5bw9]] - yATPase subunit A,B,D,E,G,H – Cryo EM<br /> | ||
**[[5y60]]. [[5y5z]], [[5y5y]], [[5y5x]] - | **[[5d80]] - yATPase subunit A,B,D,E,F,G,H<br /> | ||
**[[3gqb]] - | **[[8eas]] - yATPase + VMA22 + VMA12P – Cryo EM<br /> | ||
**[[3k5b]] - | **[[3a5c]], [[3a5d]] - TtATPase subunit A,B,D,F<br /> | ||
**[[5zea]] - | **[[6ly8]] - TtATPase subunit A,B,D,F + ADP - Cryo-EM<br /> | ||
**[[5ze9]] - | **[[6ly9]] - TtATPase subunit C,E,I,K - Cryo-EM<br /> | ||
**[[5tsj]] - TtATPase subunit A,B,C,D,E,F,G + antibody - Cryo-EM<br /> | |||
**[[5knd]], [[5knc]], [[5knb]] - | **[[5gas]], [[5gar]], [[7vai]], [[7vaj]], [[7vak]], [[7val]], [[7vam]], [[7van]], [[7vao]], [[7vap]], [[7vaq]], [[7var]], [[7vas]], [[7vat]], [[7vau]], [[7vav]], [[7vaw]], [[7vax]], [[7vay]], [[7vb0]] - TtATPase subunit A,B,C,D,E,F,G,I - Cryo-EM<br /> | ||
**[[5y60]]. [[5y5z]], [[5y5y]], [[5y5x]], [[6qum]], [[6r0w]], [[6r0y]], [[6r0z]], [[6r10]] - TtATPase subunit A,B,C,D,E,F,I,K - Cryo-EM<br /> | |||
**[[3j0j]] – TtATPase - Cryo EM<br /> | |||
**[[3gqb]] - TtATPase subunit A (mutant),B (mutant)<br /> | |||
*''Cu+2 transporting ATPase'' | **[[3k5b]] - TtATPase subunit E (mutant)+C<br /> | ||
**[[5zea]], [[7dqe]] - EhATPase subunit A,B (mutant)<br /> | |||
**[[ | **[[5ze9]] - EhATPase subunit A,B (mutant) + AMPPNP<br /> | ||
**[[5knd]], [[5knc]], [[5knb]] - EhATPase subunit A,B,D,F<br /> | |||
**[[8wci]] - EhATPase subunit K,I – Cryo EM<br /> | |||
*P-ATPase | |||
*''Cu+2 transporting ATPase'' Domains – 1st metal binding (MBD) 1-79; 2nd metal binding 169-240; 3rd metal binding 275-352; 4th metal binding 375-446; 5th metal binding 486-558; 6th metal binding 562-633; actuator 806-924; nucleotide binding (NBD) 1051-1231 | |||
**[[7xuk]], [[7xun]], [[7xuo]] – hATPase (mutant) – Cryo EM<br /> | |||
**[[7xum]] – hATPase (mutant) + Cu – Cryo EM<br /> | |||
**[[8ioy]] – hATPase (mutant) + AMPPNP – Cryo EM<br /> | |||
**[[2arf]], [[2kmv]], [[2kmx]], [[2koy]] – hATPase NBD – NMR<br /> | |||
**[[2kij]] - hATPase actuator domain – NMR<br /> | **[[2kij]] - hATPase actuator domain – NMR<br /> | ||
**[[1yjr]], [[1yjt]], [[1yju]], [[1yjv]] - hATPase (mutant) 6th | **[[1yjr]], [[1yjt]], [[1yju]], [[1yjv]] - hATPase (mutant) 6th MBD – NMR<br /> | ||
**[[1y3j]], [[1y3k]] - hATPase 5th | **[[1y3j]], [[1y3k]] - hATPase 5th MBD – NMR<br /> | ||
**[[2ew9]] - hATPase 5th+6th | **[[2ew9]] - hATPase 5th+6th MBDs – NMR<br /> | ||
**[[ | **[[1q8l]], [[1s6o]], [[1s6u]], [[2lqb]] - hATPase 2nd MBD– NMR<br /> | ||
**[[1aw0]], [[2aw0]] - hATPase 4th MBD – NMR<br /> | **[[1aw0]], [[2aw0]] - hATPase 4th MBD – NMR<br /> | ||
**[[1kvi]], [[1kvj]] - hATPase 1st MBD – NMR<br /> | **[[1kvi]], [[1kvj]] - hATPase 1st MBD – NMR<br /> | ||
**[[5t7l]] - hATPase 1st MBD + Cu transport protein<br /> | **[[5t7l]] - hATPase 1st MBD + Cu transport protein<br /> | ||
**[[2k1r]] - hATPase MBD+ ATOX1 – NMR<br /> | **[[2k1r]] - hATPase 1st MBD+ ATOX1 – NMR<br /> | ||
**[[2rop]], [[2g9o]], [[2ga7]] - hATPase MBD – NMR<br /> | **[[2rop]], [[2g9o]], [[2ga7]] - hATPase 3rd MBD – NMR<br /> | ||
**[[1fvq]], [[1fvs]] - hATPase – NMR<br /> | **[[1fvq]], [[1fvs]] - hATPase – NMR<br /> | ||
**[[3cjk]] – hATPase + Cu transporting protein ATX1<br /> | **[[3cjk]] – hATPase + Cu transporting protein ATX1<br /> | ||
| Line 266: | Line 143: | ||
**[[5lbd]] – AtATPase PAA1 N-domain<br /> | **[[5lbd]] – AtATPase PAA1 N-domain<br /> | ||
**[[5lbk]] – AtATPase PAA2 N-domain<br /> | **[[5lbk]] – AtATPase PAA2 N-domain<br /> | ||
**[[3voy]], [[3j08]], [[3j09]] - AfATPase – Archaeoglobus fulgidus – CryoEM<br /> | **[[8q76]] – riATPase – rice – Cryo EM<br /> | ||
**[[8q73]], [[8q75]] - riATPase 101-978 – Cryo EM<br /> | |||
**[[8q74]] - riATPase 101-978 + Cu – Cryo EM<br /> | |||
**[[3voy]], [[3j08]], [[3j09]] - AfATPase – ''Archaeoglobus fulgidus'' – CryoEM<br /> | |||
**[[3skx]], [[3sky]] - AfATPase NBD<br /> | **[[3skx]], [[3sky]] - AfATPase NBD<br /> | ||
**[[3a1c]] – AfATPase + AMPPCP<br /> | **[[3a1c]] – AfATPase NBD + AMPPCP<br /> | ||
**[[3a1d]] - AfATPase + ADP-Mg<br / > | **[[3a1d]] - AfATPase NBD + ADP-Mg<br / > | ||
**[[3a1e]] - AfATPase (mutant) + AMPPCP<br /> | **[[3a1e]] - AfATPase NBD (mutant) + AMPPCP<br /> | ||
**[[2rml]] - BsATPase N-terminal – ''Bacillus subtilis'' – NMR<br /> | **[[2rml]] - BsATPase N-terminal – ''Bacillus subtilis'' – NMR<br /> | ||
**[[2gcf]] - syATPase N-terminal - ''Synechocystis'' – NMR<br /> | **[[2gcf]] - syATPase N-terminal - ''Synechocystis'' – NMR<br /> | ||
| Line 279: | Line 159: | ||
**[[2yj4]], [[2yj5]], [[2yj6]] - SsATPase catalytic domain (mutant) + nucleotide<br /> | **[[2yj4]], [[2yj5]], [[2yj6]] - SsATPase catalytic domain (mutant) + nucleotide<br /> | ||
**[[3rfu]], [[4bbj]], [[4bev]], [[4byg]] – LpATPase – ''Legionella pneumophila''<br /> | **[[3rfu]], [[4bbj]], [[4bev]], [[4byg]] – LpATPase – ''Legionella pneumophila''<br /> | ||
**[[4f2f]] - ATPase | **[[8ovl]] – LpATPase 1st MBD – NMR<br /> | ||
**[[4f2f]] - ATPase MBD – ''Streptococcus pneumonia''<br /> | |||
*''Na/K transporting ATPase'' | *''Na/K transporting ATPase'' | ||
**[[7e1z]], [[7e20]], [[7e21]] - hATPase – Cryo EM<br /> | |||
**[[3kdp]], [[3b8e]] – pATPase | **[[8d3u]], [[8d3v]], [[8d3w]], [[8d3x]], [[8d3y]] - hATPase + ion transport regulator – Cryo EM<br /> | ||
**[[3kdp]], [[3b8e]], [[7yzr]] – pATPase - pig<br /> | |||
**[[3n23]] – pATPase + ouabain<br /> | **[[3n23]] – pATPase + ouabain<br /> | ||
**[[3wgv]], [[3wgu]] – pATPase + oligomycin<br /> | **[[3wgv]], [[3wgu]] – pATPase + oligomycin<br /> | ||
**[[3b8e]] - pATPase a+BeF3 <br /> | **[[3b8e]] - pATPase a+BeF3 <br /> | ||
**[[1q3i]] - pATPase NBD<br /> | **[[1q3i]] - pATPase NBD<br /> | ||
**[[4ret]], [[4res]], [[4hyt]], [[4hqj]] - pATPase subunits α,β,γ<br /> | **[[8ijv]] - pATPase subunits α,β<br /> | ||
**[[4ret]], [[4res]], [[4hyt]], [[4hqj]], [[8jbl]], [[8jbm]] - pATPase subunits α,β,γ<br /> | |||
**[[7d91]], [[7ddf]], [[7wyt]], [[7qtv]], [[7z04]] - pATPase subunits A,B + ion transport regulator <br /> | |||
**[[7d92]], [[7d93]], [[7d94]], [[7wys]], [[7ddh]], [[7ddi]], [[7ddk]], [[7ddl]] - pATPase subunits A,B + ion transport regulator + inhibitor<br /> | |||
**[[8ijw]], [[8jmn]] - pATPase subunit A + K transport ATPase subunit B – Cryo EM<br /> | |||
**[[8wa5]] - pATPase subunit A (mutant) + K transport ATPase subunit B + K – Cryo EM<br /> | |||
**[[8ijx]] - pATPase subunit A (mutant) + K transport ATPase subunit B + inibitor – Cryo EM<br /> | |||
**[[8jbk]] - pATPase subunits A,B + K transport ATPase subunit C <br /> | |||
**[[4xe5]] - bATPase <br /> | **[[4xe5]] - bATPase <br /> | ||
**[[1mo8]], [[1mo7]] - rATPase α-1<br /> | **[[1mo8]], [[1mo7]] - rATPase α-1 <br /> | ||
**[[8ijl]] - rATPase A,B – Cryo EM <br /> | |||
**[[8ijm]] - rATPase A,B (mutan t) + Na – Cryo EM <br /> | |||
**[[2hc8]] – AfATPase CopA A domain<br /> | **[[2hc8]] – AfATPase CopA A domain<br /> | ||
**[[2b8e]] - AfATPase CopA NBD<br /> | **[[2b8e]] - AfATPase CopA NBD<br /> | ||
**[[3a3y]] - | **[[3a3y]] - sdATPase+K+ouabain – spiny dogfish<br /> | ||
**[[2xze]] - | **[[2xze]] - sdATPase<br /> | ||
**[[5aw9]], [[5aw8]], [[5aw7]], [[5aw6]], [[5aw5]], [[5aw4]], [[5aw3]], [[5aw2]], | **[[2zxe]], [[5aw9]], [[5aw8]], [[5aw7]], [[5aw6]], [[5aw5]], [[5aw4]], [[5aw3]], [[5aw2]], [[5aw1]], [[5aw0]], [[5avz]], [[5avy]], [[5avx]], [[5avw]], [[5avv]], [[5avu]], [[5avt]], [[5avs]], [[5avr]], [[5avq]] – sdATPase + phospholemman-like protein<br /> | ||
**[[ | **[[7wyu]], [[7wyv]], [[7wyw]], [[7wyx]], [[7wyy]], [[7wyz]], [[7wz0]], [[7y45]], [[7y46]], [[8jfz]]- sdATPase + ion transport regulator – Cryo EM<br /> | ||
**[[8k1l]]- ATPase – ''Artemia salina'' - Cryo EM<br /> | |||
*''Ca+2 transporting ATPase'' | *''Ca+2 transporting ATPase'' | ||
**[[7yam]], [[8iwr]], [[8iws]], [[8iwt]], [[8iwu]] - hATPase – Cryo EM<br /> | |||
**[[6a69]] - hATPase + neuroplastin – Cryo EM<br /> | **[[6a69]] - hATPase + neuroplastin – Cryo EM<br /> | ||
**[[8iww]] - hATPase + ADP – Cryo EM<br /> | |||
**[[8iwp]] - hATPase + Ca – Cryo EM<br /> | |||
**[[7yag]], [[7yai]], [[7yaj]] - hATPase + nanobody + ACP – Cryo EM<br /> | |||
**[[3fgo]] - raATPase+CPA+AMPPCP – rabbit<br /> | **[[3fgo]] - raATPase+CPA+AMPPCP – rabbit<br /> | ||
**[[3b9r]], [[1xp5]] - raATPase+AlF4<br /> | **[[3b9r]], [[1xp5]] - raATPase+AlF4<br /> | ||
| Line 331: | Line 224: | ||
**[[4nab]] - raATPase Ca2E1 state (mutant) +AMPPCP<br /> | **[[4nab]] - raATPase Ca2E1 state (mutant) +AMPPCP<br /> | ||
**[[1t5t]] - raATPase Ca2E1 state+ADP+AlF4<br /> | **[[1t5t]] - raATPase Ca2E1 state+ADP+AlF4<br /> | ||
**[[1su4]] - raATPase + | **[[1su4]] - raATPase +2Ca2<br /> | ||
**[[2by4]], [[2yfy]], [[3nal]], [[3nam]], [[3nan]], [[4uu1]], [[4uu0]], [[4j2t]], | **[[2by4]], [[2yfy]], [[3nal]], [[3nam]], [[3nan]], [[4uu1]], [[4uu0]], **[[4j2t]], [[5a3s]] - raATPase HNE2 state+thapsigargin derivative<br /> | ||
**[[5a3q]] - raATPase + thapsigargin derivative + AMPPCP<br /> | **[[5a3q]] - raATPase + thapsigargin derivative + AMPPCP<br /> | ||
**[[4ycn]], [[4ycm]] - raATPase + macrolide<br /> | **[[4ycn]], [[4ycm]] - raATPase + macrolide<br /> | ||
**[[4y3u]] - raATPase + phospholamban<br /> | **[[4y3u]] - raATPase + phospholamban<br /> | ||
**[[8qmp]] - AtATPase+BeF3<br /> | |||
*'' | **[[6zhf]], [[6zhg]] - LmATPase – ''Listeria monocytogenes''<br /> | ||
**[[6zhh]] - LmATPase (mutant) + phosphocholine<br /> | |||
**[[2ofg]], [[2ofh]] - sATPase N-terminal – NMR | **[[9gqo]] - LmATPase + Ca – Cryo EM<br /> | ||
**[[4umw]], [[4umv]] - ATPase +Mg – Shigella sonni<br /> | *“Zn+2 ATPase'' | ||
**[[2ofg]], [[2ofh]] - sATPase N-terminal – NMR<br /> | |||
**[[4umw]], [[4umv]] - ATPase +Mg – ''Shigella sonni''<br /> | |||
*“Cd+2 ATPase'' | |||
**[[7qbz]], [[7qc0]] - ATPase – ''Sulfitobacter''<br /> | |||
*''K+ transporting ATPase'' | *''K+ transporting ATPase'' | ||
**[[2ynr]], [[4ux2]], [[4ux1]], [[5y0b]] – pATPase – Cryo EM<br /> | **[[2ynr]], [[4ux2]], [[4ux1]], [[5y0b]] – pATPase – Cryo EM<br /> | ||
**[[5ylv]] – pATPase + pyridine derivative<br /> | **[[5ylv]] – pATPase + pyridine derivative<br /> | ||
**[[5ylu]] – pATPase + | **[[5ylu]], [[7w47]], [[7w48]], [[7w49]], [[7w4a]] – pATPase + drug<br /> | ||
**[[6jxh]] – pATPase (mutant) + K<br /> | |||
**[[6jxk]] – pATPase + Rb<br /> | |||
**[[6jxi]], [[6jxj]] – pATPase (mutant) + Rb<br /> | |||
**[[7et1]], [[7efl]], [[7efm]], [[7efn]] – pATPase subunit beta + Na/K ATPase subunit alpha (mutant) + cholesterol – Cryo EM<br /> | |||
**[[7x20]], [[7x21]], [[7x22]], [[7x23]], [[7x24]] – raATPase subunit beta + Na/K ATPase subunit alpha (mutant) – Cryo EM<br /> | |||
**[[6hra]], [[6hrb]], [[7bgy]], [[7bh1]], [[7bh2]], [[7lc3]], [[7lc6]], [[7nnl]], [[7nnp]] – EcATPase – Cryo EM<br /> | |||
**[[7zre]], [[7zrg]], [[7zrh]], [[7zri]], [[7zrj]], [[7zrk]], [[7zrm]] – EcATPase + K – Cryo EM<br /> | |||
**[[7zrd]] – EcATPase + K + inhibitor – Cryo EM<br /> | |||
**[[2a00]], [[2a29]] - EcATPase NBD of KdpB+AMPPNP – NMR<br /> | **[[2a00]], [[2a29]] - EcATPase NBD of KdpB+AMPPNP – NMR<br /> | ||
**[[1svj]], [[1u7q]] - EcATPase NBD of KdpB – NMR<br /> | **[[1svj]], [[1u7q]] - EcATPase NBD of KdpB – NMR<br /> | ||
*''As+ transporting ATPase or GET3 or ATPase asna1 homolog'' | |||
*''As+ transporting ATPase'' | **[[7ru9]], [[7ruc]] - ATPase GET3 (mutant) + golgi to ER traffic protein + ubiquitin-like protein + BAG6 – zebrafish – Cryo EM<br /> | ||
**[[3h84]], [[3idq]], [[3a36]], [[3a37]] - yATPase GET3 <br /> | **[[3h84]], [[3idq]], [[3a36]], [[3a37]] - yATPase GET3 <br /> | ||
**[[4pwx]], [[5bwk]] - yATPase GET3 + golgi to ER traffic protein + ubiquitin-like protein <br /> | **[[4pwx]], [[5bwk]] - yATPase GET3 + golgi to ER traffic protein + ubiquitin-like protein <br /> | ||
| Line 359: | Line 261: | ||
**[[4xtr]] - yATPase GET3 + antibody + pep12p<br /> | **[[4xtr]] - yATPase GET3 + antibody + pep12p<br /> | ||
**[[3sja]], [[3sjb]], [[3sjc]], [[3sjd]], [[3zs8]], [[3zs9]], [[3b2e]], [[3vlc]] - yATPase GET3 + GET1 cystolic domain<br /> | **[[3sja]], [[3sjb]], [[3sjc]], [[3sjd]], [[3zs8]], [[3zs9]], [[3b2e]], [[3vlc]] - yATPase GET3 + GET1 cystolic domain<br /> | ||
**[[1ii0]], [[ | **[[1ii0]], [[1f48]], [[1ii9]] - EcATPase<br /> | ||
**[[1ihu]] – EcATPase+Mg+ADP+AlF3<br /> | **[[1ihu]] – EcATPase+Mg+ADP+AlF3<br /> | ||
[[3ibg]] - ATPase GET3 – ''Aspergillus fumigatus'' | **[[3ibg]] - ATPase GET3 – ''Aspergillus fumigatus''<br /> | ||
**[[8odv]] - ATPase GET3 (mutant) + GET2 + GET1 – ''Thermochaetoides thermophila''<br /> | |||
**[[8had]] - PtATPase GET3 – ''Phaeodactylum tricornutum''<br /> | |||
**[[8hac]] - PtATPase GET3 + ADP<br /> | |||
**[[7spz]] - GlATPase GET3 – ''Giardia lamblia''<br /> | |||
**[[7spy]] - GlATPase GET3 + ATP<br /> | |||
**[[7sq0]] - GlATPase GET3 + ADP<br /> | |||
*''H+ transporting ATPase'' | *''H+ transporting ATPase'' | ||
**[[7vh5]], [[7vh6]] – yATPase - Cryo EM <br /> | |||
**[[5ksd]] - AtATPase C terminal truncated<br /> | **[[5ksd]] - AtATPase C terminal truncated<br /> | ||
**[[1mhs]] - | **[[1mhs]] - NcATPase – ''Neurospora crassa''<br /> | ||
**[[7op1]], [[7op3]], [[7op5]], [[7op8]], [[8odu]] – CtATPase – ''Chaetomium thermophilum'' - Cryo EM <br /> | |||
*''Na+ transporting ATPase'' | *''Na+ transporting ATPase'' | ||
**[[2db4]], [[3aou]] - EhATPase subunit K <br /> | |||
**[[2db4]], [[3aou]] - EhATPase subunit K | |||
**[[3aon]] - EhATPase subunits D,G<br /> | **[[3aon]] - EhATPase subunits D,G<br /> | ||
**[[3vr2]] - EhATPase subunits A,B<br /> | **[[3vr2]], [[8igu]], [[7coq]], [[8igv]], [[8igw]] - EhATPase subunits A,B<br /> | ||
**[[3vr4]], [[3vr5]] - EhATPase subunits A,B,D,G<br /> | **[[3vr4]], [[3vr5]] - EhATPase subunits A,B,D,G<br /> | ||
**[[3vr3]] - EhATPase subunits A,B + AMPPNP<br /> | **[[3vr3]] - EhATPase subunits A,B + AMPPNP<br /> | ||
**[[3vr6]] - EhATPase subunits A,B,D,G + AMPPNP<br /> | **[[3vr6]] - EhATPase subunits A,B,D,G + AMPPNP<br /> | ||
**[[1yce]] - | **[[1yce]] - IlATPase rotor ring | ||
*''H/K transporting ATPase'' | *''H/K transporting ATPase'' | ||
**[[1iwc]], [[1iwf]] - pATPase NBD <br /> | **[[1iwc]], [[1iwf]] - pATPase NBD <br /> | ||
**[[3ixz]] - pATPase a+AlF4<br /> | **[[3ixz]] - pATPase a+AlF4<br /> | ||
**[[2xzb]] – pATPase subunits α, β<br /> | **[[2xzb]] – pATPase subunits α, β<br /> | ||
*''Mg+2 transporting ATPase'' | *''Mg+2 transporting ATPase'' | ||
**[[3gwi]] – EcATPase P-1 NBD | **[[3gwi]] – EcATPase P-1 NBD | ||
*''Arg/ornithine transporting ATPase'' | *''Arg/ornithine transporting ATPase'' | ||
**[[1h8e]] – bATPase+ADP+AlF4+ADP+SO4 <br /> | |||
**[[1h8e]] – bATPase+ADP+AlF4+ADP+SO4<br /> | **[[1h8h]] -bcATPase+ AMPPNP<br /> | ||
**[[1h8h]] - | |||
**[[1efr]] - bATPase+efrapeptin<br /> | **[[1efr]] - bATPase+efrapeptin<br /> | ||
**[[3cf0]], [[3cf1]], [[3cf3]] – mATPase NBD+ADP – mouse<br /> | **[[3cf0]], [[3cf1]], [[3cf3]] – mATPase NBD+ADP – mouse<br /> | ||
**[[3cf2]] - mATPase NBD+ADP+AMP-PNP<br /> | **[[3cf2]] - mATPase NBD+ADP+AMP-PNP<br /> | ||
**[[1kmh]] - sATPase alpha subunit+tentoxin | **[[1kmh]] - sATPase alpha subunit+tentoxin <br /> | ||
**[[3fks]] – yATPase <br /> | **[[3fks]] – yATPase <br /> | ||
**[[3ea0]] – ATPase ParA, fragment – ''Chlorobium tepidum''<br /> | **[[3ea0]] – ATPase ParA, fragment – ''Chlorobium tepidum''<br /> | ||
| Line 404: | Line 304: | ||
**[[1vdz]] – PhATPase subunit A – ''Pyrococcus horikoshii''<br /> | **[[1vdz]] – PhATPase subunit A – ''Pyrococcus horikoshii''<br /> | ||
**[[3md0]] – MtATPase+GDP <br /> | **[[3md0]] – MtATPase+GDP <br /> | ||
*''Monosaccharide transporting ATPase'' | *''Monosaccharide transporting ATPase'' | ||
**[[5dte]] – AsATPase – ''Actinobacillus succinogenes''<br /> | |||
**[[5dte]] – AsATPase – Actinobacillus succinogenes<br /> | |||
**[[4zjp]] – AsATPase + ribopyranose<br /> | **[[4zjp]] – AsATPase + ribopyranose<br /> | ||
*''Phospholipid transporting ATPase'' | |||
**[[7lkp]], [[7roq]], [[7tdt]], [[7w01]], [[8edw]], [[8ee6]], [[8eeb]] – hATPase – Cryo EM <br /> | |||
**[[7w02]], [[8eop]] – hATPase (mutant) + ATP – Cryo EM <br /> | |||
**[[6k7g]], [[6k7h]], [[6k7i]], [[6k7j]], [[6k7k]], [[6k7l]], [[6k7m]], [[6k7n]], [[7py4]], [[7vgh]], [[7vgi]], [[7vgj]], [[7vsg]], [[7vsh]], [[8ox4]], [[8ox5]], [[8ox6]], [[8ox7]], [[8ox8]], [[8ox9]], [[8oxa]], [[8oxc]] – hATPase + cell cycle control protein – Cryo EM <br /> | |||
**[[6lkn]] – hATPase (mutant) + cell cycle control protein <br /> | |||
**[[7drx]], [[7f7f]], [[7ky5]], [[7ky6]], [[7ky7]], [[7kya]], [[7kyc]] – yATPase + LEM3 – Cryo EM <br /> | |||
**[[7ky9]], [[7kyb]] – yATPase + LEM3 + ADP – Cryo EM <br /> | |||
**[[7dsh]], [[7dsi]], [[7ky8]], [[7whv]], [[7whw]] – yATPase + LEM3 + AMPPCP – Cryo EM <br /> | |||
**[[6lcp]], [[6lcr]] – CtATPase + cell cycle control protein - Cryo EM <br /> | |||
*''Polyamine transporting ATPase'' | |||
**[[7vpi]], [[7vpk]], [[8iel]], [[8ien]], [[8ieo]] – hATPase – Cryo EM <br /> | |||
**[[7vpj]], [[8ies]] – hATPase + ADP – Cryo EM <br /> | |||
**[[8iek]] – hATPase + ATP – Cryo EM <br /> | |||
**[[7vpl]], [[8iem]] – hATPase + spermine – Cryo EM <br /> | |||
*RNA-dependent ATPase | *RNA-dependent ATPase | ||
**[[3eaq]], [[3i31]], [[3i32]] – TtATPase fragment<br /> | **[[3eaq]], [[3i31]], [[3i32]] – TtATPase fragment<br /> | ||
**[[4kbg]], [[4kbf]] - TtATPase helicase core domain<br /> | **[[4kbg]], [[4kbf]] - TtATPase helicase core domain<br /> | ||
| Line 420: | Line 330: | ||
**[[3mwk]], [[3nbf]] – TtATPase N-terminal + 8-oxo-AMP<br /> | **[[3mwk]], [[3nbf]] – TtATPase N-terminal + 8-oxo-AMP<br /> | ||
**[[3mwl]] - TtATPase N-terminal (mutant) + 8-oxoadenine<br /> | **[[3mwl]] - TtATPase N-terminal (mutant) + 8-oxoadenine<br /> | ||
**[[3nej]] - TtATPase reca-like domain (mutant) | **[[3nej]] - TtATPase reca-like domain (mutant) <br /> | ||
* DNA-dependent ATPase | * DNA-dependent ATPase | ||
**[[5tnu]] - ATPase – ''Sulfolobus tokodaii''<br /> | **[[5tnu]] - ATPase – ''Sulfolobus tokodaii''<br /> | ||
**[[6p4o]], [[6p4w]] - ATPase + endonuclease BAX1 – ''Sulfurisphaera tokodaii''<br /> | |||
**[[ | |||
*Proteasome-associated ATPase | *Proteasome-associated ATPase | ||
**[[7qxu]] – hATPase in proteasome – Cryo EM<br /> | |||
**[[ | **[[8d6v]], [[8d6w]] – MtATPase subunits alpha, beta – Cryo EM<br /> | ||
**[[ | **[[7pxc]] – MtATPase subunits alpha, beta + Pup – Cryo EM<br /> | ||
**[[3fp9]], [[3m9b]], [[3m9h]] – MtATPase intern domain<br /> | **[[3fp9]], [[3m9b]], [[3m9h]] – MtATPase intern domain<br /> | ||
**[[3m91]], [[3m9d]] - MtATPase coiled coil domain + protein PUP<br /> | **[[3m91]], [[3m9d]] - MtATPase coiled coil domain + protein PUP<br /> | ||
**[[5kzf]] – MtATPase residues 98-609<br /> | **[[5kzf]] – MtATPase residues 98-609<br /> | ||
**[[5kwa]] – MtATPase residues 22-529<br /> | **[[5kwa]] – MtATPase residues 22-529<br /> | ||
**[[6kww]] – ATPase subunit HsIU – ''Staphylococcus aureus''<br /> | |||
**[[5txv]] – EcATPase subunit HslU<br /> | |||
**[[6pxk]], [[[6pxl]], [[6pxx]] – EcATPase subunit HsIU + ADP<br /> | |||
**[[5ji3]], [[5ji2]] – EcATPase subunits HslU+HslV<br /> | |||
**[[6pxi]] – EcATPase subunit HsIU+HsIV + ADP<br /> | |||
**[[2wfw]] – ATPase substrate recognition domain – ''Rhodococcus erythropolis''<br /> | |||
**[[7mhb]] – ATPase subunit HsIU + ADP – ''Brucella abortus''<br /> | |||
*Transitional endoplasmic reticulum ATPase residues 1-806 | *Transitional endoplasmic reticulum ATPase residues 1-806 | ||
**[[7r7u]] – hTer-ATPase – Cryo EM<br /> | |||
**[[5c19]] – hTer-ATPase (mutant) <br /> | **[[5c19]] – hTer-ATPase (mutant) <br /> | ||
**[[8pqx]], [[8r0e]], [[8rs9]] – hTer-ATPase (mutant) – Cryo EM<br /> | |||
**[[5ftn]], [[5ftm]], [[5ftl]], [[5ftk]], [[5ftj]] – hTer-ATPase + ATPGS<br /> | **[[5ftn]], [[5ftm]], [[5ftl]], [[5ftk]], [[5ftj]] – hTer-ATPase + ATPGS<br /> | ||
**[[7vcs]], [[7vcv]], [[7vcx]] – hTer-ATPase + ATPGS – Cryo EM<br /> | |||
**[[5c18]] – hTer-ATPase (mutant) + ATPGS<br /> | **[[5c18]] – hTer-ATPase (mutant) + ATPGS<br /> | ||
**[[7rl7]], [[7rla]], [[7rlc]], [[7rlf]], [[7rlh]] – hTer-ATPase (mutant) + ATPGS – Cryo EM<br /> | |||
**[[7rlj]] – hTer-ATPase (mutant) + ATPGS + inhibitor – Cryo EM<br /> | |||
**[[7rli]] – hTer-ATPase + ADP + inhibitor – Cryo EM<br /> | |||
**[[7wub]], [[8ooi]], [[8rsb]] – hTer-ATPase + ADP – Cryo EM<br /> | |||
**[[7rl6]], [[7rl9]], [[7rlb]], [[7rld]], [[7rlg]], [[8rsc]] – hTer-ATPase (mutant) + ADP – Cryo EM<br /> | |||
**[[7vct]], [[7vcu]] – hTer-ATPase + ATPGS + ADP – Cryo EM<br /> | |||
**[[8fcl]], [[8fcm]], [[8fcn]], [[8fco]], [[8fcp]], [[8fcq]], [[8fcr]], [[8fct]] – hTer-ATPase + UBXD1 + ADP – Cryo EM<br /> | |||
**[[7y4w]], [[7y53]], [[7y59]] – hTer-ATPase + derlin + ADP – Cryo EM<br /> | |||
**[[8b5r]] – hTer-ATPase + P37 + SPI – Cryo EM<br /> | |||
**[[5c1b]] - hTer-ATPase + UFD1--SHP peptide<br /> | **[[5c1b]] - hTer-ATPase + UFD1--SHP peptide<br /> | ||
**[[5ifw]], [[5ifs]] - hTer-ATPase + tether containing UBX domain<br /> | **[[5ifw]], [[5ifs]] - hTer-ATPase + tether containing UBX domain<br /> | ||
**[[6mck]] - hTer-ATPase + inhibitor<br /> | **[[6mck]] - hTer-ATPase + inhibitor<br /> | ||
**[[8uv2]], [[8uvp]], [[9boq]] - hTer-ATPase + inhibitor – Cryo EM<br /> | |||
**[[8uvq]] - hTer-ATPase (mutant) + inhibitor – Cryo EM<br /> | |||
**[[8uvo]] - hTer-ATPase (mutant) + ADP + inhibitor – Cryo EM<br /> | |||
**[[6hd0]] - hTer-ATPase + PUX1 + ADP<br /> | |||
**[[8hl7]] - hTer-ATPase + N-Lys methyltransferase + SAH + ADP<br /> | |||
**[[8yka]] - hTer-ATPase + deubiquitinqting protein – Cryo EM<br /> | |||
**[[7r7s]] - hTer-ATPase + p47 – Cryo EM<br /> | |||
**[[7r7t]] - hTer-ATPase + p47 + ADP – Cryo EM<br /> | |||
* Transitional endoplasmic reticulum ATPase residues 1-480 | * Transitional endoplasmic reticulum ATPase residues 1-480 | ||
**[[3hu1]], [[3hu2]], [[3hu3]] – hTer-ATPase + ATPGS<br /> | **[[3hu1]], [[3hu2]], [[3hu3]] – hTer-ATPase + ATPGS<br /> | ||
**[[4ko8]], [[4kln]], [[5dyg]] – hTer-ATPase (mutant) + ATPGS<br /> | **[[4ko8]], [[4kln]], [[5dyg]] – hTer-ATPase (mutant) + ATPGS<br /> | ||
| Line 456: | Line 382: | ||
**[[4kod]] – hTer-ATPase (mutant) + ADP<br /> | **[[4kod]] – hTer-ATPase (mutant) + ADP<br /> | ||
**[[5kiy]], [[5kiw]] - hTer-ATPase (mutant) + Selenoprotein S<br /> | **[[5kiy]], [[5kiw]] - hTer-ATPase (mutant) + Selenoprotein S<br /> | ||
**[[8kg2]] – hTer-ATPase (mutant) + FAS-associated factor<br /> | |||
**[[8hrz]] – hTer-ATPase (mutant) + P47 UBX domain<br /> | |||
* Transitional endoplasmic reticulum ATPase residues 1-200 | * Transitional endoplasmic reticulum ATPase residues 1-200 | ||
**[[3qc8]], [[3qq8]], [[3qwz]] - hTer-ATPase + FAS-associated factor 1<br /> | **[[3qc8]], [[3qq8]], [[3qwz]] - hTer-ATPase + FAS-associated factor 1<br /> | ||
**[[3qq7]] - hTer-ATPase<br /> | **[[3qq7]] - hTer-ATPase<br /> | ||
**[[3tiw]] - hTer-ATPase + E3 ubiquitin-protein ligase peptide | **[[3tiw]] - hTer-ATPase + E3 ubiquitin-protein ligase peptide | ||
**[[5glf]] - hTer-ATPase + derlin-1 peptide<br /> | **[[5glf]] - hTer-ATPase + derlin-1 peptide<br /> | ||
**[[5epp]] - hTer-ATPase + rhomboid-related protein 4 peptide<br /> | **[[5epp]] - hTer-ATPase N + rhomboid-related protein 4 peptide<br /> | ||
**[[4kdl]], [[4kdi]] - hTer-ATPase + ubiquitin thioesterase OTU1<br /> | **[[4kdl]], [[4kdi]] - hTer-ATPase + ubiquitin thioesterase OTU1<br /> | ||
**[[5b6c]] - hTer-ATPase | **[[5b6c]] - hTer-ATPase + ubiquitin fusion degradation protein<br /> | ||
**[[5x4l]] - hTer-ATPase + UBX domain-containing protein<br /> | **[[5x4l]] - hTer-ATPase + UBX domain-containing protein<br /> | ||
**[[1s3s]] - mTer-ATPase ND1 domain + P47 C terminal<br /> | **[[1s3s]] - mTer-ATPase ND1 domain + P47 C terminal<br /> | ||
**[[4rv0]] - Ter-ATPase N terminal + nuclear protein localization protein – ''Drosophila melanogaster''<br /> | **[[4rv0]] - Ter-ATPase N terminal + nuclear protein localization protein – ''Drosophila melanogaster''<br /> | ||
* Transitional endoplasmic reticulum ATPase D2 domain residues 462-764 | |||
**[[6g2v]], [[6g2w]], [[6g2x]], [[6g2y]], [[6g2z]], [[6g30]] - hTer-ATPase + ADP<br /> | |||
* Sarcoplasmic/endoplasmic reticulum ATPase | * Sarcoplasmic/endoplasmic reticulum ATPase | ||
**[[6jju]], [[5ztf]], [[7bt2]] – hATPase 2<br /> | |||
**[[ | **[[7w7u]], [[7w7v]], [[7w7w]] – hATPase 2 – Cryo EM<br /> | ||
**[[ | **[[7w7t]] – hATPase 2 + Ca – Cryo EM<br /> | ||
**[[ | **[[6lle]], [[6lly]], [[6ln5]], [[6ln6]], [[6ln7]], [[6ln8]], [[6ln9]] – hATPase 2 + AMPPCP – Cryo EM<br /> | ||
**[[5mpm]], [[6hxb]] – pATPase <br /> | **[[5mpm]], [[6hxb]] – pATPase <br /> | ||
**[[5xa7]], [[5xa8]], [[5xa9]], [[5xaa]], [[5xab]], [[6yso]] – raATPase <br /> | |||
**[[5zmw]] – raATPase (mutant) <br /> | |||
**[[5ncq]] – raATPase + ATP derivative + carbazole derivative<br /> | |||
**[[6hef]], [[6rb2]] – raATPase + AMPPCP<br /> | |||
**[[8owa]], [[8owl]]– raATPase + thapsigargin<br /> | |||
**[[5zmv]] – raATPase (mutant) + thapsigargin<br /> | |||
**[[6yaa]] – raATPase + ATP derivative + inhibitor<br /> | |||
*LAO/AO transport system ATPase | *LAO/AO transport system ATPase | ||
**[[3nxs]] – MsATPase + GDP<br /> | |||
**[[6cum]] – MsATPase <br /> | **[[6cum]] – MsATPase <br /> | ||
*DNA double-strand repair ATPase (Rad50) | *DNA double-strand repair ATPase (Rad50) | ||
**[[3aux]] – MjRad50 – ''Methanocaldococcus jannaschii''<br /> | **[[3aux]] – MjRad50 – ''Methanocaldococcus jannaschii''<br /> | ||
**[[3auy]] - MjRad50 + ADP<br /> | **[[3auy]] - MjRad50 + ADP<br /> | ||
| Line 497: | Line 424: | ||
**[[4ncj]] - PfRad50 NBD (mutant) + BeF3 + ADP<br /> | **[[4ncj]] - PfRad50 NBD (mutant) + BeF3 + ADP<br /> | ||
**[[3qkt]] - PfRad50 NBD + AMPPNP<br /> | **[[3qkt]] - PfRad50 NBD + AMPPNP<br /> | ||
**[[3qku]] - PfRad50 NBD + AMPPNP + MRE11 | **[[3qku]] - PfRad50 NBD + AMPPNP + MRE11<br /> | ||
*MipZ ATPase | |||
* MipZ ATPase | **[[2xit]], [[2xj4]] – CcMipZ – ''Caulobacter crescentus''<br /> | ||
**[[2xj9]] – CcMipZ (mutant) <br /> | |||
[[2xit]], [[2xj4]] – CcMipZ – ''Caulobacter crescentus''<br /> | |||
[[2xj9]] – CcMipZ (mutant) | |||
* ATPase Rava | * ATPase Rava | ||
**[[5fl2]], [[4upf]] – EcATPase LARA domain + lysine decarboxylase<br /> | **[[5fl2]], [[4upf]] – EcATPase LARA domain + lysine decarboxylase<br /> | ||
**[[4upb]] – EcATPase + lysine decarboxylase – Cryo EM<br /> | **[[4upb]], [[6q7l]], [[6q7m]] – EcATPase + lysine decarboxylase – Cryo EM<br /> | ||
**[[3nbx]] – EcATPase Rava + ADP | **[[3nbx]] – EcATPase Rava + ADP<br /> | ||
**[[6sza]], [[6szb]] – EcATPase Rava + ADP – Cryo EM<br /> | |||
* | *FlaI ATPase | ||
**[[4ihq]], [[4ii7]] – ATPase (mutant) – ''Sulfolobus acidocaldarius''<br /> | **[[4ihq]], [[4ii7]] – ATPase (mutant) – ''Sulfolobus acidocaldarius''<br /> | ||
*Vescicle-fusing ATPase | *Vescicle-fusing ATPase | ||
**[[6mdm]], [[6mdn]] – haATPase + SNAP-25 + syntaxin-1A + VAMP-2 + NSF attachment protein – hamster – Cryo EM<br /> | **[[6mdm]], [[6mdn]] – haATPase + SNAP-25 + syntaxin-1A + VAMP-2 + NSF attachment protein – hamster – Cryo EM<br /> | ||
**[[6mdo]], [[6mdp]] – haATPase + SNAP-25 – Cryo EM<br /> | **[[6mdo]], [[6mdp]] – haATPase + SNAP-25 – Cryo EM<br /> | ||
* ATPase Invc | |||
**[[6sdx]] – ATPase – ''Salmonella enterica''<br /> | |||
* ATPase in ribosome | |||
**[[6tmf]] – ATPase – ''Thermococcus celer''<br /> | |||
* P5A-type ATPase | |||
**[[6xmp]], [[6xmq]], [[6xms]], [[6xmt]], [[6xmu]] – yATPase – Cryo EM<br /> | |||
* ATPase SpaL/MxiB | |||
**[[6n6l]], [[6n6m]], [[6n70]], [[6n71]], [[6n72]], [[6n73]], [[6n75]], [[6n76]] – ATPase (mutant) – ''Shigella flexneri''<br /> | |||
* Plasma membrane ATPase | |||
**[[7nxf]], [[7ny1]] – NcATPase – Cryo EM<br /> | |||
* Peroxisomal ATPase | |||
**[[8u0x]] – yPex6 N1 domain 1-184 <br /> | |||
**[[8u0v]] – yPex1 + Pex6 – Cryo EM<br /> | |||
**[[8c0v]], [[8c0w]] – yPex1 + Pex6 (mutant) + peptide + ADP + ATP – Cryo EM<br /> | |||
* Archaeal ATPase | |||
**[[8fnw]], [[8fnt]] – EcATPase – Cryo EM<br /> | |||
**[[8hr7]], [[8hr8]], [[8hr9]] – EcATPase + ATP – Cryo EM<br /> | |||
**[[8hra]], [[8hrb]] – EcATPase + ATP + RNA – Cryo EM<br /> | |||
* Ino80 ATPase or chromatin-remodeling ATPase | |||
**[[6hts]], [[7vdv]], [[7y8r]], [[7zi4]], [[[8ooa]], [8x15]], [[8x19]], [[8x1c]] – hIno80 in nucleosome – Cryo EM<br /> | |||
**[[8ett]], [[8etv]], [[8eu2]], [[8eue]], [[8euj]] – fIno80 in nucleosome – frog - Cryo EM<br /> | |||
**[[6gej]], [[6gen]], [[7x3t]], [[8a5a]], [[8a5o]], [[8ets]], [[8etu]], [[8etw]], [[8eu9]], [[8euf]], [[8qku]], [[8qkv]], [[8qyv]], [[8qz0]], [[9b1d]], [[9b1e]], [[9fbw]] – yIno80 in nucleosome – Cryo EM<br /> | |||
**[[5nbn]] – yIno80 in nucleosome <br /> | |||
**[[8a5d]], [[8a5p]], [[8a5q]], [[8atf]] – CtIno80 in nucleosome – Cryo EM<br /> | |||
**[[6fml]], [[8atf]], [[8av6]], [[8oo7]], [[8oo9]], [[8ooc]], [[8oof]], [[8oop]], [[8oor]], [[8oos]], [[8oot]] – TtIno80 + DNA – Cryo EM<br /> | |||
*'''ATPase synthesizing ATP or ATP synthase''' | |||
*V-ATPS subunit A | |||
**[[3i4l]], [[7qss]], [[7qst]] - PhATPS subunit A <br /> | |||
**[[3mfy]], [[3m4y]], [[3nd8]], [[3nd9]], [[3p20]], [[3qg1]], [[3qia]], [[3qjy]], [[3sdz]], [[3se0]], [[5x09]] - PhATPS subunit A (mutant) | |||
**[[3i72]], [[3i73]], [[3ikj]] - TtATPS subunit A (mutant) <br /> | |||
**[[5bn5]] – NeATPS + NEQ263 – ''Nanoarchaeum equitans'' <br /> | |||
**[[5bn4]] – NeATPS + NEQ263 + ANP <br /> | |||
**[[5bn3]] – NeATPS + NEQ263 + ADP <br /> | |||
**[[5bo5]] – NeATPS subunit NeqB <br /> | |||
*V-ATPS subunit B | |||
**[[2rkw]], [[3b2q]], [[3ssa]], [[3tgw]], [[3tiv]] - MmATPS subunit B (mutant) <br /> | |||
**[[3dsr]] - MmATPS subunit B+ADP<br /> | |||
**[[3eiu]] - MmATPS subunit B+ATP<br /> | |||
*V-ATPS subunit C | |||
**[[3v3c]] – ATPS subunit C – pea<br /> | |||
**[[4mjn]] - F1-ATPS - wheat<br /> | |||
**[[2w5j]], [[6tqj]] – sF1-ATPS - spinach<BR /> | |||
**[[3u2f]], [[3u2y]], [[3u32]], [[3ud0]] - yATPS subunit C <br /> | |||
**[[1ijp]], [[1l6t]] – EcF1-ATPS subunit C (mutant) - NMR<br /> | |||
**[[4utq]] – EcF1-ATPS membrane domain + insertase YIDC – Cryo EM<BR /> | |||
**[[3lg8]] - MjATPS subunit C C-terminal <br /> | |||
**[[2wie]], [[2xqs]], [[2xqt]], [[2xqu]] - ATPS subunit C – ''Arthrospira platensis''<br /> | |||
**[[3zk1]], [[3zk2]] - ATPS subunit C <br /> | |||
**[[7wem]] – BaF1-ATPS subunit C - NMR<br /> | |||
**[[4bem]] - F1F0-ATPS – ''Acetobacterium woodii''<br /> | |||
*V-ATPS subunit E | |||
**[[2dm9]], [[2dma]] - PhATPS subunit E <br /> | |||
**[[4dt0]] – PhATPS subunit E<br /> | |||
**[[2kk7]] - MjATPS subunit E N-terminal – NMR<br /> | |||
*V-ATPS subunit F | |||
**[[2ov6]] - MmATPS subunit F - NMR<br /> | |||
**[[2d00]] - TtATPS subunit F<br /> | |||
**[[2qai]] - PfATPS subunit F <br /> | |||
**[[2i4r]] - AfATPS subunit F <br /> | |||
*''' | *F1F0 ATPS α subunit | ||
**[[2r9v]] - F1-ATPS – ''Thermotoga maritima''<br /> | |||
** [[ | *F1F0 ATPS β subunit | ||
**[[1pyv]] - F1-ATPS – NMR – tobacco<br /> | |||
**[[1b9u]] – EcF1-ATPS membrane domain – NMR<br /> | |||
**[[1l2p]] – EcF1-ATPS dimerization domain<br /> | |||
**[[2khk]] - EcF1-ATPS fragment – NMR<br /> | |||
**[[4q4l]] - F1-ATPS – ''Burkholderia thailandensis''<br /> | |||
*F1F0 ATPS γ subunit | |||
**[[1wu0]] – BaATPS – NMR<br /> | |||
**[[1a91]], [[1c0v]], [[1aty]], [[1c99]] – EcF1-ATPS – NMR<br /> | |||
**[[2wgm]] – ItF0-ATPS – ''Ilyobacter tartaricus''<br /> | |||
**[[4v1g]] – MpF0F1-ATPS – ''Mycobacterium phlei''<br /> | |||
**[[4v1f]], [[4v1h]] – MpF0-ATPS + drug<br /> | |||
**[[2x2v]], [[4cbk]], [[4cbj]] – BpF0-ATPS – ''Bacillus pseudofirmus''<br /> | |||
**[[3zo6]] – BpF0-ATPS (mutant)<br /> | |||
*F1F0 ATPS δ subunit | |||
**[[1abv]] – EcF1-ATPS N terminal – NMR<br /> | |||
*F1F0 ATPS ε subunit | |||
**[[1aqt]] – EcF1-ATPS (mutant) <br /> | |||
**[[1bsh]], [[1bsn]] – EcF1-ATPS – NMR<br /> | |||
**[[2e5t]], [[2e5u]] – BaF1-ATPS C terminal – NMR<br /> | |||
**[[2e5y]] – BaF1-ATPS<br /> | |||
**[[6pi4]] – MsF1-ATPS <BR /> | |||
**[[7vil]], [[7xkz]] – F1-ATPS – ''Mycobacterium abscessus'' - NMR<BR /> | |||
**[[5yio]] – MtF1-ATPS+GDP – ''Mycobacterium tuberculosis'' - NMR<br /> | |||
*F1F0 ATPS α,b subunits | |||
**[[8spv]] – BaF1-ATPS – Cryo EM<br /> | |||
**[[8spx]] – BaF1-ATPS + ATP – Cryo EM<br /> | |||
**[[8spw]] – BaF1-ATPS + ATP + ADP – Cryo EM<br /> | |||
*F1F0 ATPS α,γ subunits | |||
**[[1c17]] – EcF1-ATPS – NMR<br /> | |||
**[[8j58]], [[8jr1]] – MtF1-ATPS – Cryo EM<br /> | |||
**[[8j57]] – MtF1-ATPS + drug – Cryo EM<br /> | |||
*F1F0 ATPS β,δ subunits | |||
**[[8h9g]], [[8h9n]] – hF1-ATPS + ATPS coupling factor – Cryo EM<br /> | |||
**[[2cly]] – bF1-ATPS + ATPS coupling factor<br /> | |||
*F1F0 ATPS γ,ε subunits | |||
**[[1fs0]] – EcF1-ATPS<br /> | |||
*F1F0 ATPS α,β,γ,δ subunits | |||
**[[1qo1]]- yF1-ATPS + protein 9<br /> | |||
*F1F0 ATPS α,β,γ subunits | |||
**[[9avj]] - BaF1-ATPS + ANP – Cryo EM<br /> | |||
**[[8u1h]] - BaF1-ATPS (mutant) + ANP + ADP – Cryo EM<br /> | |||
*ATPS multi subunits | |||
**[[8h9e]], [[8h9f]], [[8h9i]], [[8h9k]], [[8h9m]], [[8h9p]], [[8h9q]], [[8h9r]], [[8h9s]], [[8h9t]], [[8h9v]] – hATPS – Cryo EM <br /> | |||
**[[8khf]], [[8ki3]] – hATPS + drug – Cryo EM <br /> | |||
**[[5fil]], [[5fik]], [[5fij]], [[5ari]], [[5arh]], [[5are]], [[5ara]], [[6xbw]], [[6xby]], [[6zbb]], [[6zg7]], [[6zg8]], [[6zik]], [[6ziq]], [[6zit]], [[6ziu]], [[6zpo]], [[6zqm]], [[6zqn]], [[7ajb]], [[7ajc]], [[7ajd]], [[7aje]], [[7ajf]], [[7ajg]], [[7ajh]], [[7aji]], [[7ajj]] – bATPS – Cryo EM <br /> | |||
**[[4asu]], [[2jdi]], [[2jj1]], [[2jj2]] - bF1-ATPS<br /> | |||
**[[2v7q]], [[1e79]], [[2ck3]], [[2zia]] - bF1-ATPS+inhibitor<br /> | |||
**[[6yy0]], [[6z1r]], [[6z1u]] - bF1-ATPS+ inhibitor + coupling factor + ADP + ATP – Cryo EM<br /> | |||
**[[2xnd]], [[2xok]] - bF1-ATPS+ATPS lipid-binding protein<br /> | |||
**[[6j54]], [[6j5a]], [[6j5i]], [[6j5j]], [[6j5k]], [[6zna]], [[6zmr]] – pATPS - Cryo EM<br /> | |||
**[[6j5k]] – pATPS + ADP + ATP - Cryo EM<br /> | |||
**[[6za9]] – oATPS – ovine - Cryo EM<br /> | |||
**[[6tt7]] – oATPS + ADP - Cryo EM<br /> | |||
**[[6vm1]], [[6vm4]], [[6vmg]] – sATPS - Cryo EM<br /> | |||
**[[6fkf]], [[6fkh]], [[6fki]], [[6vmb]], [[6vmd]], [[6vof]], [[6vog]], [[6voh]], [[6voi]], [[6voj]], [[6vok]], [[6vol]], [[6vom]], [[6von]], [[6voo]] – sATPS + ADP + ATP - Cryo EM<br /> | |||
**[[4b2q]], [[6b2z]], [[6b8h]], [[6cp6]], [[6cp7]],[[6wtd]], [[7tjy]], [[7tjz]], [[7tk0]], [[7tk1]], [[7tk2]], [[7tk3]], [[7tk4]], [[7tk5]], [[7tk6]], [[7tk7]], [[7tk8]], [[7tk9]], [[7tka]], [[7tkb]], [[7tkc]], [[7tkd]], [[7tke]], [[7tkf]], [[7tkg]], [[7tkh]], [[7tki]], [[7tkj]], [[7tkk]], [[7tkl]], [[7tkm]], [[7tkn]], [[7tko]], [[7tkp]], [[7tkq]], [[7tkr]], [[7tks]], [[8eat]], [[8eau]], [[8f29]], [[8f39]], [[8fl8]] – yATPS – Cryo EM<br /> | |||
**[[3fks]], [[3zry]], [[2hld]] - yF1-ATPS<br /> | |||
**[[3oe7]], [[3oee]], [[3oeh]],[[3ofn]] - yF1-ATPS (mutant)<br /> | |||
**[[8f2k]] - yF1-ATPS + ATP + inhibitor – Cryo EM<br /> | |||
**[[7tjs]] – yATPS + ADP + ATP - Cryo EM<br /> | |||
**[[6cp3]] – yATPS + oligomycin<br /> | |||
**[[6cp5]] – yATPS + oligomycin inhibitor – Cryo EM<br /> | |||
**[[2wpd]] – yATPS + ADP + ATP <br /> | |||
**[[7md3]] – yATPS + ATP + drug – Cryo EM <br /> | |||
**[[2wpd]], [[2wss]] - yF1-ATPS+subunit 9+Mg+ADP+ATP<br /> | |||
**[[6tdu]], [[6tdv]], [[6tdw]], [[6tdx]], [[6tdy]], [[6tdz]], [[6te0]] – ATPS + ADP + ATP – Euglena gracilis – Cryo EM<br /> | |||
**[[5fl7]] – ATPS + ADP + ATP – ''Yarrowiya lipolytica'' <br /> | |||
**[[7jg5]], [[7jg6]], [[7jg7]], [[7jgb]], [[7jgc]], [[7nk7]], [[7nk9]], [[7nkb]], [[7nkd]], [[7nkh]], [[7nkj]], [[7nkk]], [[7nkl]], [[7nkn]], [[7nkp]], [[7nkq]], [[7nl9]] – MsATPS – Cryo EM<br /> | |||
**[[7jg8]], [[7jg9]], [[7jga]] – MsATPS + drug – Cryo EM<br /> | |||
**[[7njk]], [[7njl]], [[7njm]], [[7njn]], [[7njo]], [[7njp]], [[7njq]], [[7njr]], [[7njs]], [[7njt]], [[7nju]], [[7njv]], [[7njw]], [[7njx]], [[7njy]] – MsATPS + ADP + ATP – Cryo EM<br /> | |||
**[[6f36]], [[6rd4]], [[6rd5]], [[6rd6]], [[6rd7]], [[6rd8]], [[6rd9]], [[6rda]], [[6rdb]], [[6rdc]], [[6rdd]], [[6rde]], [[6rdf]], [[6rdg]], [[6rdi]], [[6rdj]], [[6rdk]], [[6rdl]], [[6rdm]], [[6rdn]], [[6rdp]], [[6rdq]], [[6rds]], [[6rdt]], [[6rdu]], [[6rdv]], [[6rdx]], [[6rdy]], [[6rdz]], [[6re0]], [[6re1]], [[6re2]], [[6re3]], [[6re4]], [[6re5]], [[6re6]], [[6re7]], [[6re8]], [[6re9]], [[6rea]], [[6reb]], [[6rec]], [[6red]], [[6ree]], [[6ref]], [[6rer]], [[6res]], [[6ret]], [[6reu]] – ATPS – ''Polytomella'' - Cryo EM<br /> | |||
**[[5lqz]], [[5lqy]], [[5lqx]] – ATPS + ATPase inhibitor protein – ''Ogataea angusta'' - Cryo EM<br /> | |||
**[[5dn6]] – PdATPS + zeta inhibitor protein <br /> | |||
**[[5t4o]], [[5t4p]], [[5t4q]], [[6oqr]], [[6oqs]], [[6oqt]], [[6oqu]], [[6oqv]], [[6oqw]], [[6pqv]], [[6vwk]], [[6wnq]], [[6wnr]], [[8dbv]] – EcATPS – Cryo EM<br /> | |||
**[[7md2]], [[7tjt]], [[7tju]], [[7tjv]], [[7tjw]], [[7tjx]] – EcATPS + ATP – Cryo EM<br /> | |||
**[[8dbp]], [[8dbq]], [[8dbr]], [[8dbs]], [[8dbt]], [[8dbu]], [[8dbw]] – EcATPS + ADP + ATP – Cryo EM<br /> | |||
**[[3oaa]] – EcATPS (mutant) + ADP + ANP <br /> | |||
**[[7xkh]], [[7xko]], [[7xkp]], [[7xkq]], [[7xkr]] – BaATPS – Cryo EM<br /> | |||
**[[6n2d]], [[6n2y]], [[6n2z]], [[6n30]] – BaATPS + ADP + ATP – Cryo EM<br /> | |||
**[[7p2y]], [[7p3n]], [[7p3w]] – AbATPS + ADP + ATP – Cryo EM<br /> | |||
**[[6tmg]], [[6tmh]], [[6tmi]], [[6tmj]], [[6tmk]], [[6tml]] – ATPS + ATPase inhibitor protein + OSCP + ADP + ATP – Toxoplasma gondii - Cryo EM<br /> | |||
**[[6ynv]], [[6ynw]], [[6ynx]], [[6yny]], [[6ynz]], [[6yo0]] – ATPS + ADP + ATP – ''Tetrahymena thermophila'' - Cryo EM<br /> | |||
**[[8apa]], [[8apc]], [[8apd]], [[8ape]], [[8apg]], [[8apj]], [[8apk]] – TbATPS - Cryo EM<br /> | |||
**[[8j0t]] – MtATPS - Cryo EM<br /> | |||
**[[8jr0]] – MtATPS + ATP + ADP + inhibitor - Cryo EM<br /> | |||
**[[8j0s]] – MtATPS + drug - Cryo EM<br /> | |||
}} | }} | ||
[[Category:Topic Page]] | |||