ATPase 3D structures: Difference between revisions

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Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}}
Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}}
{{#tree:id=OrganizedByTopic|openlevels=0|
{{#tree:id=OrganizedByTopic|openlevels=0|
*'''ATPase hydrolysing ATP'''
*'''ATPase hydrolysing ATP'''
*''F1F0 ATPase α subunit''
*''F1F0 ATPase α subunit''
**[[2jmx]] - bF1-ATPase+subunit O - bovine<br />
**[[2jmx]] - bF1-ATPase+subunit O - bovine<br />
**[[6foc]] – MsF-ATPase – ''Mycobacterium smegmatis''<br />
**[[6foc]] – MsF-ATPase – ''Mycobacterium smegmatis''<br />
*''F1F0 ATPase ε subunit''
*''F1F0 ATPase ε subunit''
**[[2rq6]], [[2rq7]] - TeF1-ATPase – ''Thermosynechococcus elongatus''<br />
**[[2rq6]], [[2rq7]] - TeF1-ATPase – ''Thermosynechococcus elongatus''<br />
**[[8hgx]] – AbATPS – ''Acinetobacter baumannii'' – NMR<br />
**[[8hgx]] – AbATPS – ''Acinetobacter baumannii'' – NMR<br />
*''F1F0 ATPase zeta subunit''
*''F1F0 ATPase zeta subunit''
**[[7vkv]] - F1-ATPase – ''Sinorhizobium meliloti'' - NMR<br />
**[[7vkv]] - F1-ATPase – ''Sinorhizobium meliloti'' - NMR<br />
*''F1F0 ATPase α, β subunits''
*''F1F0 ATPase α, β subunits''
**[[1sky]] – BaF1-ATPase – ''Bacillus'' <br />
**[[1sky]] – BaF1-ATPase – ''Bacillus'' <br />
**[[5cdf]] – PdATPase - ''Paracoccus denitrificans''<br />
**[[5cdf]] – PdATPase - ''Paracoccus denitrificans''<br />
*''F1F0 ATPase α, δ subunits''
*''F1F0 ATPase α, δ subunits''
**[[2a7u]] – EcF1-ATPase N termini – ''Escherichia coli'' - NMR<BR />
**[[2a7u]] – EcF1-ATPase N termini – ''Escherichia coli'' - NMR<BR />
*''F1F0 ATPase γ, ε subunits''
*''F1F0 ATPase γ, ε subunits''
**[[5zwl]] – TeF1-ATPase<br />
**[[5zwl]] – TeF1-ATPase<br />
*''F1F0 ATPase α, β, γ subunits''
*''F1F0 ATPase α, β, γ subunits''
**[[1ohh]], [[2jiz]], [[4tt3]], [[4tsf]], [[4z1m]] – bF1-ATPase + IF1 inhibitor <br />
**[[1ohh]], [[2jiz]], [[4tt3]], [[4tsf]], [[4z1m]] – bF1-ATPase + IF1 inhibitor <br />
**[[1e1q]], [[2w6e]], [[2w6f]], [[2w6g]], [[2w6h]], [[2w6i]], [[2w6j]] - bF1-ATPase<br />
**[[1e1q]], [[2w6e]], [[2w6f]], [[2w6g]], [[2w6h]], [[2w6i]], [[2w6j]] - bF1-ATPase<br />
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**[[1mab]], [[2f43]] - rF1-ATPase – rat<br />
**[[1mab]], [[2f43]] - rF1-ATPase – rat<br />
**[[8hh1]], [[8hh2]], [[8hh3]], [[8hh4]], [[8hh5]], [[8hh6]], [[8hh7]], [[8hh8]], [[8hh9]], [[8hha]], [[8hhb]], [[8hhc]] - BaF1-ATPase – Cryo EM<br />
**[[8hh1]], [[8hh2]], [[8hh3]], [[8hh4]], [[8hh5]], [[8hh6]], [[8hh7]], [[8hh8]], [[8hh9]], [[8hha]], [[8hhb]], [[8hhc]] - BaF1-ATPase – Cryo EM<br />
*”F1F0 ATPase α,β,γ,ε subunits”
*”F1F0 ATPase α,β,γ,ε subunits”
**[[1jnv]] - EcF1-ATPase <br />
**[[1jnv]] - EcF1-ATPase <br />
**[[2qe7]], [[4xd7]] – BaF1-ATPase <br />
**[[2qe7]], [[4xd7]] – BaF1-ATPase <br />
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**[[6q45]] – FnF1-ATPase  – ''Fusobacterium nucleatum''<br />
**[[6q45]] – FnF1-ATPase  – ''Fusobacterium nucleatum''<br />
**[[7yry]], [[8zi0]], [[8zi1]], [[8zi2]], [[8zi3]] – AbATPS + ADP + ATP – Cryo EM<br />
**[[7yry]], [[8zi0]], [[8zi1]], [[8zi2]], [[8zi3]] – AbATPS + ADP + ATP – Cryo EM<br />
*''F1F0 ATPase α, β, γ, δ, ε subunits''
*''F1F0 ATPase α, β, γ, δ, ε subunits''
**[[4asu]], [[2jdi]], [[2jj1]], [[2jj2]]  - bF1-ATPase<br />
**[[4asu]], [[2jdi]], [[2jj1]], [[2jj2]]  - bF1-ATPase<br />
**[[2v7q]], [[1e79]], [[2ck3]] -  bF1-ATPase +inhibitor<br />
**[[2v7q]], [[1e79]], [[2ck3]] -  bF1-ATPase +inhibitor<br />
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**[[3zia]] - yF1-ATPase + inhibitor protein<br />
**[[3zia]] - yF1-ATPase + inhibitor protein<br />
**[[6f5d]] - TbF1-ATPase + ribonucleoprotein P18 – ''Trypanosoma brucei''<br />
**[[6f5d]] - TbF1-ATPase + ribonucleoprotein P18 – ''Trypanosoma brucei''<br />
*''F1F0 ATPase multiple subunits''
*''F1F0 ATPase multiple subunits''
**[[8h9j]], [[8h9l]], [[8h9u]] - hF1-ATPase – Cryo EM
**[[8h9j]], [[8h9l]], [[8h9u]] - hF1-ATPase – Cryo EM
**[[1bmf]] - bF1-ATPase<br />
**[[1bmf]] - bF1-ATPase<br />
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**[[8ap6]], [[8ap7]], [[8aph]], [[8apb]] - TbF1-ATPase – Cryo EM
**[[8ap6]], [[8ap7]], [[8aph]], [[8apb]] - TbF1-ATPase – Cryo EM
**[[7y5a]], [[7y5b]], [[7y5c]], [[7y5d]] - MsF1-ATPase – Cryo EM
**[[7y5a]], [[7y5b]], [[7y5c]], [[7y5d]] - MsF1-ATPase – Cryo EM
*V-ATPase
*V-ATPase
*''V-ATPase subunit A''
*''V-ATPase subunit A''
**[[7uzg]], [[7uzh]], [[7uzi]], [[7uzk]] - rATPase + SidK – Cryo EM
**[[7uzg]], [[7uzh]], [[7uzi]], [[7uzk]] - rATPase + SidK – Cryo EM
**[[5i1m]] – yATPase  <br />
**[[5i1m]] – yATPase  <br />
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**[[4o1s]] - ATPase subunit A – ''Thermoplasma volcanium''<br />
**[[4o1s]] - ATPase subunit A – ''Thermoplasma volcanium''<br />
**[[7qsu]] – ATPase – ''Thermococcus litoralis'' <br />
**[[7qsu]] – ATPase – ''Thermococcus litoralis'' <br />
*''V-ATPase subunit B''
*''V-ATPase subunit B''
**[[2c61]] - MmATPase subunit B – ''Methanosarcina mazei''<br />
**[[2c61]] - MmATPase subunit B – ''Methanosarcina mazei''<br />
*''V-ATPase subunit C''
*''V-ATPase subunit C''
**[[1u7l]] - yATPase subunit C<br />
**[[1u7l]] - yATPase subunit C<br />
**[[1r5z]], [[1v9m]] - TtATPase subunit C – ''Thermus thermophilus''<br />
**[[1r5z]], [[1v9m]] - TtATPase subunit C – ''Thermus thermophilus''<br />
*''V-ATPase subunit D+F''
*''V-ATPase subunit D+F''
**[[4rnd]] – yATPase subunit D+F<br />
**[[4rnd]] – yATPase subunit D+F<br />
*''V-ATPase subunit E''
*''V-ATPase subunit E''
**[[2kz9]] – yATPase subunit E<br />
**[[2kz9]] – yATPase subunit E<br />
**[[3v6i]] – TtATPase subunit E + VAPC<br />
**[[3v6i]] – TtATPase subunit E + VAPC<br />
*''V-ATPase subunit F''
*''V-ATPase subunit F''
**[[4ix9]] – yATPase subunit F (mutant)<br />
**[[4ix9]] – yATPase subunit F (mutant)<br />
*''V-ATPase subunit G''
*''V-ATPase subunit G''
**[[2k88]] - yATPase subunit G residues 2-58 - NMR<br />
**[[2k88]] - yATPase subunit G residues 2-58 - NMR<br />
**[[2kwy]] - yATPase subunit G residues 61-101 - NMR<br />
**[[2kwy]] - yATPase subunit G residues 61-101 - NMR<br />
*''V-ATPase subunit H''
*''V-ATPase subunit H''
**[[1ho8]] – yATPase subunit H <br />
**[[1ho8]] – yATPase subunit H <br />
*''V-ATPase subunit K''
*''V-ATPase subunit K''
**[[2bl2]], [[2cyd]] - EhATPase subunit K – ''Enterococcus hirae''<br />
**[[2bl2]], [[2cyd]] - EhATPase subunit K – ''Enterococcus hirae''<br />
*''V-ATPase subunit I''
*''V-ATPase subunit I''
**[[3rrk]] – ATPase subunit I N terminal – ''Meiothermus ruber''<br />
**[[3rrk]] – ATPase subunit I N terminal – ''Meiothermus ruber''<br />
**''V-ATPase multi subunits''
**''V-ATPase multi subunits''
**[[6wlw]] – hATPase – human - Cryo EM <br />
**[[6wlw]] – hATPase – human - Cryo EM <br />
**[[6wlz]], [[6wm2]], [[6wm3]], [[6wm4]] – hATPase + ADP – Cryo EM <br />
**[[6wlz]], [[6wm2]], [[6wm3]], [[6wm4]] – hATPase + ADP – Cryo EM <br />
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**[[5knd]], [[5knc]], [[5knb]] - EhATPase subunit A,B,D,F<br />
**[[5knd]], [[5knc]], [[5knb]] - EhATPase subunit A,B,D,F<br />
**[[8wci]] - EhATPase subunit K,I – Cryo EM<br />
**[[8wci]] - EhATPase subunit K,I – Cryo EM<br />
*P-ATPase
*P-ATPase
*''Cu+2 transporting ATPase'' Domains – 1st metal binding (MBD) 1-79; 2nd metal binding 169-240; 3rd metal binding 275-352; 4th metal binding 375-446; 5th metal binding 486-558; 6th metal binding 562-633; actuator 806-924; nucleotide binding (NBD) 1051-1231
*''Cu+2 transporting ATPase'' Domains – 1st metal binding (MBD) 1-79; 2nd metal binding 169-240; 3rd metal binding 275-352; 4th metal binding 375-446; 5th metal binding 486-558; 6th metal binding 562-633; actuator 806-924; nucleotide binding (NBD) 1051-1231
**[[7xuk]], [[7xun]], [[7xuo]] – hATPase (mutant) – Cryo EM<br />
**[[7xuk]], [[7xun]], [[7xuo]] – hATPase (mutant) – Cryo EM<br />
**[[7xum]] – hATPase (mutant) + Cu – Cryo EM<br />
**[[7xum]] – hATPase (mutant) + Cu – Cryo EM<br />
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**[[8ovl]] – LpATPase 1st MBD – NMR<br />
**[[8ovl]] – LpATPase 1st MBD – NMR<br />
**[[4f2f]] - ATPase MBD – ''Streptococcus pneumonia''<br />
**[[4f2f]] - ATPase MBD – ''Streptococcus pneumonia''<br />
*''Na/K transporting ATPase''
*''Na/K transporting ATPase''
**[[7e1z]], [[7e20]], [[7e21]] - hATPase – Cryo EM<br />
**[[7e1z]], [[7e20]], [[7e21]] - hATPase – Cryo EM<br />
**[[8d3u]], [[8d3v]], [[8d3w]], [[8d3x]], [[8d3y]] - hATPase + ion transport regulator – Cryo EM<br />
**[[8d3u]], [[8d3v]], [[8d3w]], [[8d3x]], [[8d3y]] - hATPase + ion transport regulator – Cryo EM<br />
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**[[7wyu]], [[7wyv]], [[7wyw]], [[7wyx]], [[7wyy]], [[7wyz]], [[7wz0]], [[7y45]], [[7y46]], [[8jfz]]- sdATPase + ion transport regulator – Cryo EM<br />
**[[7wyu]], [[7wyv]], [[7wyw]], [[7wyx]], [[7wyy]], [[7wyz]], [[7wz0]], [[7y45]], [[7y46]], [[8jfz]]- sdATPase + ion transport regulator – Cryo EM<br />
**[[8k1l]]- ATPase – ''Artemia salina'' - Cryo EM<br />
**[[8k1l]]- ATPase – ''Artemia salina'' - Cryo EM<br />
*''Ca+2 transporting ATPase''
*''Ca+2 transporting ATPase''
**[[7yam]], [[8iwr]], [[8iws]], [[8iwt]], [[8iwu]] - hATPase – Cryo EM<br />
**[[7yam]], [[8iwr]], [[8iws]], [[8iwt]], [[8iwu]] - hATPase – Cryo EM<br />
**[[6a69]] - hATPase + neuroplastin – Cryo EM<br />
**[[6a69]] - hATPase + neuroplastin – Cryo EM<br />
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**[[6zhh]] - LmATPase (mutant) + phosphocholine<br />
**[[6zhh]] - LmATPase (mutant) + phosphocholine<br />
**[[9gqo]] - LmATPase + Ca – Cryo EM<br />
**[[9gqo]] - LmATPase + Ca – Cryo EM<br />
*“Zn+2 ATPase''
*“Zn+2 ATPase''
**[[2ofg]], [[2ofh]] - sATPase N-terminal – NMR<br />
**[[2ofg]], [[2ofh]] - sATPase N-terminal – NMR<br />
**[[4umw]], [[4umv]] - ATPase +Mg – ''Shigella sonni''<br />
**[[4umw]], [[4umv]] - ATPase +Mg – ''Shigella sonni''<br />
*“Cd+2 ATPase''
*“Cd+2 ATPase''
**[[7qbz]], [[7qc0]] - ATPase – ''Sulfitobacter''<br />
**[[7qbz]], [[7qc0]] - ATPase – ''Sulfitobacter''<br />
*''K+ transporting ATPase''
*''K+ transporting ATPase''
**[[2ynr]], [[4ux2]], [[4ux1]], [[5y0b]] – pATPase – Cryo EM<br />
**[[2ynr]], [[4ux2]], [[4ux1]], [[5y0b]] – pATPase – Cryo EM<br />
**[[5ylv]] – pATPase + pyridine derivative<br />
**[[5ylv]] – pATPase + pyridine derivative<br />
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**[[2a00]], [[2a29]] - EcATPase NBD of KdpB+AMPPNP – NMR<br />
**[[2a00]], [[2a29]] - EcATPase NBD of KdpB+AMPPNP – NMR<br />
**[[1svj]], [[1u7q]] - EcATPase NBD of KdpB – NMR<br />
**[[1svj]], [[1u7q]] - EcATPase NBD of KdpB – NMR<br />
*''As+ transporting ATPase or GET3 or ATPase asna1 homolog''
*''As+ transporting ATPase or GET3 or ATPase asna1 homolog''
**[[7ru9]], [[7ruc]] - ATPase GET3 (mutant) + golgi to ER traffic protein + ubiquitin-like protein + BAG6 – zebrafish – Cryo EM<br />
**[[7ru9]], [[7ruc]] - ATPase GET3 (mutant) + golgi to ER traffic protein + ubiquitin-like protein + BAG6 – zebrafish – Cryo EM<br />
**[[3h84]], [[3idq]],  [[3a36]], [[3a37]] - yATPase GET3 <br />
**[[3h84]], [[3idq]],  [[3a36]], [[3a37]] - yATPase GET3 <br />
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**[[7spy]] - GlATPase GET3 + ATP<br />
**[[7spy]] - GlATPase GET3 + ATP<br />
**[[7sq0]] - GlATPase GET3 + ADP<br />
**[[7sq0]] - GlATPase GET3 + ADP<br />
*''H+ transporting ATPase''
*''H+ transporting ATPase''
**[[7vh5]], [[7vh6]] – yATPase - Cryo EM <br />
**[[7vh5]], [[7vh6]] – yATPase - Cryo EM <br />
**[[5ksd]]  - AtATPase C terminal truncated<br />
**[[5ksd]]  - AtATPase C terminal truncated<br />
**[[1mhs]] - NcATPase – ''Neurospora crassa''<br />
**[[1mhs]] - NcATPase – ''Neurospora crassa''<br />
**[[7op1]], [[7op3]], [[7op5]], [[7op8]], [[8odu]] – CtATPase – ''Chaetomium thermophilum'' - Cryo EM <br />
**[[7op1]], [[7op3]], [[7op5]], [[7op8]], [[8odu]] – CtATPase – ''Chaetomium thermophilum'' - Cryo EM <br />
*''Na+ transporting ATPase''
*''Na+ transporting ATPase''
**[[2db4]], [[3aou]] - EhATPase subunit K <br />
**[[2db4]], [[3aou]] - EhATPase subunit K <br />
**[[3aon]] - EhATPase subunits D,G<br />
**[[3aon]] - EhATPase subunits D,G<br />
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**[[3vr6]] - EhATPase subunits A,B,D,G + AMPPNP<br />
**[[3vr6]] - EhATPase subunits A,B,D,G + AMPPNP<br />
**[[1yce]] - IlATPase rotor ring  
**[[1yce]] - IlATPase rotor ring  
*''H/K transporting ATPase''
*''H/K transporting ATPase''
**[[1iwc]], [[1iwf]] - pATPase NBD <br />
**[[1iwc]], [[1iwf]] - pATPase NBD <br />
**[[3ixz]] - pATPase a+AlF4<br />
**[[3ixz]] - pATPase a+AlF4<br />
**[[2xzb]] – pATPase subunits α, β<br />
**[[2xzb]] – pATPase subunits α, β<br />
*''Mg+2 transporting ATPase''
*''Mg+2 transporting ATPase''
**[[3gwi]] – EcATPase P-1 NBD
**[[3gwi]] – EcATPase P-1 NBD
*''Arg/ornithine transporting ATPase''
*''Arg/ornithine transporting ATPase''
**[[1h8e]] – bATPase+ADP+AlF4+ADP+SO4 <br />
**[[1h8e]] – bATPase+ADP+AlF4+ADP+SO4 <br />
**[[1h8h]] -bcATPase+ AMPPNP<br />
**[[1h8h]] -bcATPase+ AMPPNP<br />
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**[[1vdz]] – PhATPase subunit A – ''Pyrococcus horikoshii''<br />
**[[1vdz]] – PhATPase subunit A – ''Pyrococcus horikoshii''<br />
**[[3md0]] – MtATPase+GDP <br />
**[[3md0]] – MtATPase+GDP <br />
*''Monosaccharide transporting ATPase''
*''Monosaccharide transporting ATPase''
**[[5dte]] – AsATPase – ''Actinobacillus succinogenes''<br />
**[[5dte]] – AsATPase – ''Actinobacillus succinogenes''<br />
**[[4zjp]] – AsATPase + ribopyranose<br />
**[[4zjp]] – AsATPase + ribopyranose<br />
*''Phospholipid transporting ATPase''
*''Phospholipid transporting ATPase''
**[[7lkp]], [[7roq]], [[7tdt]], [[7w01]], [[8edw]], [[8ee6]], [[8eeb]] – hATPase – Cryo EM <br />
**[[7lkp]], [[7roq]], [[7tdt]], [[7w01]], [[8edw]], [[8ee6]], [[8eeb]] – hATPase – Cryo EM <br />
**[[7w02]], [[8eop]] – hATPase (mutant) + ATP – Cryo EM <br />
**[[7w02]], [[8eop]] – hATPase (mutant) + ATP – Cryo EM <br />
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**[[7dsh]], [[7dsi]], [[7ky8]], [[7whv]], [[7whw]] – yATPase + LEM3 + AMPPCP – Cryo EM <br />
**[[7dsh]], [[7dsi]], [[7ky8]], [[7whv]], [[7whw]] – yATPase + LEM3 + AMPPCP – Cryo EM <br />
**[[6lcp]], [[6lcr]] – CtATPase + cell cycle control protein - Cryo EM <br />
**[[6lcp]], [[6lcr]] – CtATPase + cell cycle control protein - Cryo EM <br />
*''Polyamine transporting ATPase''
*''Polyamine transporting ATPase''
**[[7vpi]], [[7vpk]], [[8iel]], [[8ien]], [[8ieo]] – hATPase – Cryo EM <br />
**[[7vpi]], [[7vpk]], [[8iel]], [[8ien]], [[8ieo]] – hATPase – Cryo EM <br />
**[[7vpj]], [[8ies]] – hATPase + ADP – Cryo EM <br />
**[[7vpj]], [[8ies]] – hATPase + ADP – Cryo EM <br />
**[[8iek]] – hATPase + ATP – Cryo EM <br />
**[[8iek]] – hATPase + ATP – Cryo EM <br />
**[[7vpl]], [[8iem]] – hATPase + spermine – Cryo EM <br />
**[[7vpl]], [[8iem]] – hATPase + spermine – Cryo EM <br />
*RNA-dependent ATPase
*RNA-dependent ATPase
**[[3eaq]], [[3i31]], [[3i32]] – TtATPase fragment<br />
**[[3eaq]], [[3i31]], [[3i32]] – TtATPase fragment<br />
**[[4kbg]], [[4kbf]] - TtATPase helicase core domain<br />
**[[4kbg]], [[4kbf]] - TtATPase helicase core domain<br />
Line 408: Line 331:
**[[3mwl]] - TtATPase N-terminal (mutant) + 8-oxoadenine<br />
**[[3mwl]] - TtATPase N-terminal (mutant) + 8-oxoadenine<br />
**[[3nej]] - TtATPase reca-like domain (mutant) <br />
**[[3nej]] - TtATPase reca-like domain (mutant) <br />
* DNA-dependent ATPase
* DNA-dependent ATPase
**[[5tnu]] - ATPase – ''Sulfolobus tokodaii''<br />
**[[5tnu]] - ATPase – ''Sulfolobus tokodaii''<br />
**[[6p4o]], [[6p4w]] - ATPase + endonuclease BAX1 – ''Sulfurisphaera tokodaii''<br />
**[[6p4o]], [[6p4w]] - ATPase + endonuclease BAX1 – ''Sulfurisphaera tokodaii''<br />
*Proteasome-associated ATPase
*Proteasome-associated ATPase
**[[7qxu]] – hATPase in proteasome – Cryo EM<br />
**[[7qxu]] – hATPase in proteasome – Cryo EM<br />
**[[8d6v]], [[8d6w]] – MtATPase subunits alpha, beta – Cryo EM<br />
**[[8d6v]], [[8d6w]] – MtATPase subunits alpha, beta – Cryo EM<br />
Line 430: Line 349:
**[[2wfw]] – ATPase substrate recognition domain – ''Rhodococcus erythropolis''<br />
**[[2wfw]] – ATPase substrate recognition domain – ''Rhodococcus erythropolis''<br />
**[[7mhb]] – ATPase subunit HsIU + ADP – ''Brucella abortus''<br />
**[[7mhb]] – ATPase subunit HsIU + ADP – ''Brucella abortus''<br />
*Transitional endoplasmic reticulum ATPase residues 1-806
*Transitional endoplasmic reticulum ATPase residues 1-806
**[[7r7u]] – hTer-ATPase  – Cryo EM<br />
**[[7r7u]] – hTer-ATPase  – Cryo EM<br />
**[[5c19]] – hTer-ATPase (mutant) <br />
**[[5c19]] – hTer-ATPase (mutant) <br />
Line 459: Line 376:
**[[7r7s]] - hTer-ATPase + p47 – Cryo EM<br />
**[[7r7s]] - hTer-ATPase + p47 – Cryo EM<br />
**[[7r7t]] - hTer-ATPase + p47 + ADP – Cryo EM<br />
**[[7r7t]] - hTer-ATPase + p47 + ADP – Cryo EM<br />
* Transitional endoplasmic reticulum ATPase residues 1-480
* Transitional endoplasmic reticulum ATPase residues 1-480
**[[3hu1]], [[3hu2]], [[3hu3]] – hTer-ATPase + ATPGS<br />
**[[3hu1]], [[3hu2]], [[3hu3]] – hTer-ATPase + ATPGS<br />
**[[4ko8]], [[4kln]], [[5dyg]] – hTer-ATPase (mutant) + ATPGS<br />
**[[4ko8]], [[4kln]], [[5dyg]] – hTer-ATPase (mutant) + ATPGS<br />
Line 469: Line 384:
**[[8kg2]] – hTer-ATPase (mutant) + FAS-associated factor<br />
**[[8kg2]] – hTer-ATPase (mutant) + FAS-associated factor<br />
**[[8hrz]] – hTer-ATPase (mutant) + P47 UBX domain<br />
**[[8hrz]] – hTer-ATPase (mutant) + P47 UBX domain<br />
* Transitional endoplasmic reticulum ATPase residues 1-200
* Transitional endoplasmic reticulum ATPase residues 1-200
**[[3qc8]], [[3qq8]], [[3qwz]] - hTer-ATPase + FAS-associated factor 1<br />
**[[3qc8]], [[3qq8]], [[3qwz]] - hTer-ATPase + FAS-associated factor 1<br />
**[[3qq7]] - hTer-ATPase<br />
**[[3qq7]] - hTer-ATPase<br />
Line 482: Line 395:
**[[1s3s]] - mTer-ATPase ND1 domain + P47 C terminal<br />
**[[1s3s]] - mTer-ATPase ND1 domain + P47 C terminal<br />
**[[4rv0]] - Ter-ATPase N terminal + nuclear protein localization protein – ''Drosophila melanogaster''<br />
**[[4rv0]] - Ter-ATPase N terminal + nuclear protein localization protein – ''Drosophila melanogaster''<br />
* Transitional endoplasmic reticulum ATPase D2 domain residues 462-764
* Transitional endoplasmic reticulum ATPase D2 domain residues 462-764
**[[6g2v]], [[6g2w]], [[6g2x]], [[6g2y]], [[6g2z]], [[6g30]] - hTer-ATPase + ADP<br />
**[[6g2v]], [[6g2w]], [[6g2x]], [[6g2y]], [[6g2z]], [[6g30]] - hTer-ATPase + ADP<br />
* Sarcoplasmic/endoplasmic reticulum ATPase
* Sarcoplasmic/endoplasmic reticulum ATPase
**[[6jju]], [[5ztf]], [[7bt2]] – hATPase 2<br />
**[[6jju]], [[5ztf]], [[7bt2]] – hATPase 2<br />
**[[7w7u]], [[7w7v]], [[7w7w]] – hATPase 2 – Cryo EM<br />
**[[7w7u]], [[7w7v]], [[7w7w]] – hATPase 2 – Cryo EM<br />
Line 501: Line 410:
**[[5zmv]] – raATPase (mutant) + thapsigargin<br />
**[[5zmv]] – raATPase (mutant) + thapsigargin<br />
**[[6yaa]] – raATPase + ATP derivative + inhibitor<br />
**[[6yaa]] – raATPase + ATP derivative + inhibitor<br />
*LAO/AO transport system ATPase
*LAO/AO transport system ATPase
**[[3nxs]] – MsATPase + GDP<br />
**[[3nxs]] – MsATPase + GDP<br />
**[[6cum]] – MsATPase <br />
**[[6cum]] – MsATPase <br />
*DNA double-strand repair ATPase (Rad50)
*DNA double-strand repair ATPase (Rad50)
**[[3aux]] – MjRad50 – ''Methanocaldococcus jannaschii''<br />
**[[3aux]] – MjRad50 – ''Methanocaldococcus jannaschii''<br />
**[[3auy]] - MjRad50 + ADP<br />
**[[3auy]] - MjRad50 + ADP<br />
Line 520: Line 425:
**[[3qkt]] - PfRad50 NBD + AMPPNP<br />
**[[3qkt]] - PfRad50 NBD + AMPPNP<br />
**[[3qku]] - PfRad50 NBD + AMPPNP + MRE11<br />
**[[3qku]] - PfRad50 NBD + AMPPNP + MRE11<br />
*MipZ ATPase
*MipZ ATPase
**[[2xit]], [[2xj4]] – CcMipZ – ''Caulobacter crescentus''<br />
**[[2xit]], [[2xj4]] – CcMipZ – ''Caulobacter crescentus''<br />
**[[2xj9]] – CcMipZ (mutant) <br />
**[[2xj9]] – CcMipZ (mutant) <br />
* ATPase Rava
* ATPase Rava
**[[5fl2]], [[4upf]] – EcATPase LARA domain + lysine decarboxylase<br />
**[[5fl2]], [[4upf]] – EcATPase LARA domain + lysine decarboxylase<br />
**[[4upb]], [[6q7l]], [[6q7m]] – EcATPase + lysine decarboxylase – Cryo EM<br />
**[[4upb]], [[6q7l]], [[6q7m]] – EcATPase + lysine decarboxylase – Cryo EM<br />
**[[3nbx]] – EcATPase Rava + ADP<br />
**[[3nbx]] – EcATPase Rava + ADP<br />
**[[6sza]], [[6szb]] – EcATPase Rava + ADP – Cryo EM<br />
**[[6sza]], [[6szb]] – EcATPase Rava + ADP – Cryo EM<br />
*FlaI ATPase
*FlaI ATPase
**[[4ihq]], [[4ii7]] – ATPase (mutant) – ''Sulfolobus acidocaldarius''<br />
**[[4ihq]], [[4ii7]] – ATPase (mutant) – ''Sulfolobus acidocaldarius''<br />
*Vescicle-fusing ATPase  
*Vescicle-fusing ATPase  
**[[6mdm]], [[6mdn]] – haATPase + SNAP-25 + syntaxin-1A + VAMP-2 + NSF attachment protein – hamster – Cryo EM<br />
**[[6mdm]], [[6mdn]] – haATPase + SNAP-25 + syntaxin-1A + VAMP-2 + NSF attachment protein – hamster – Cryo EM<br />
**[[6mdo]], [[6mdp]] – haATPase + SNAP-25 – Cryo EM<br />
**[[6mdo]], [[6mdp]] – haATPase + SNAP-25 – Cryo EM<br />
* ATPase Invc
* ATPase Invc
**[[6sdx]] – ATPase – ''Salmonella enterica''<br />
**[[6sdx]] – ATPase – ''Salmonella enterica''<br />
* ATPase in ribosome
* ATPase in ribosome
**[[6tmf]] – ATPase – ''Thermococcus celer''<br />
**[[6tmf]] – ATPase – ''Thermococcus celer''<br />
* P5A-type ATPase  
* P5A-type ATPase  
**[[6xmp]], [[6xmq]], [[6xms]], [[6xmt]], [[6xmu]] – yATPase – Cryo EM<br />
**[[6xmp]], [[6xmq]], [[6xms]], [[6xmt]], [[6xmu]] – yATPase – Cryo EM<br />
* ATPase SpaL/MxiB
* ATPase SpaL/MxiB
**[[6n6l]], [[6n6m]], [[6n70]], [[6n71]], [[6n72]], [[6n73]], [[6n75]], [[6n76]] – ATPase (mutant) – ''Shigella flexneri''<br />
**[[6n6l]], [[6n6m]], [[6n70]], [[6n71]], [[6n72]], [[6n73]], [[6n75]], [[6n76]] – ATPase (mutant) – ''Shigella flexneri''<br />
* Plasma membrane ATPase  
* Plasma membrane ATPase  
**[[7nxf]], [[7ny1]] – NcATPase – Cryo EM<br />
**[[7nxf]], [[7ny1]] – NcATPase – Cryo EM<br />
* Peroxisomal ATPase  
* Peroxisomal ATPase  
**[[8u0x]] – yPex6 N1 domain 1-184 <br />
**[[8u0x]] – yPex6 N1 domain 1-184 <br />
**[[8u0v]] – yPex1 + Pex6 – Cryo EM<br />
**[[8u0v]] – yPex1 + Pex6 – Cryo EM<br />
**[[8c0v]], [[8c0w]] – yPex1 + Pex6 (mutant) + peptide + ADP + ATP – Cryo EM<br />
**[[8c0v]], [[8c0w]] – yPex1 + Pex6 (mutant) + peptide + ADP + ATP – Cryo EM<br />
* Archaeal ATPase  
* Archaeal ATPase  
**[[8fnw]], [[8fnt]] – EcATPase – Cryo EM<br />
**[[8fnw]], [[8fnt]] – EcATPase – Cryo EM<br />
**[[8hr7]], [[8hr8]], [[8hr9]] – EcATPase + ATP – Cryo EM<br />
**[[8hr7]], [[8hr8]], [[8hr9]] – EcATPase + ATP – Cryo EM<br />
**[[8hra]], [[8hrb]] – EcATPase + ATP + RNA – Cryo EM<br />
**[[8hra]], [[8hrb]] – EcATPase + ATP + RNA – Cryo EM<br />
* Ino80 ATPase or chromatin-remodeling ATPase
* Ino80 ATPase or chromatin-remodeling ATPase
**[[6hts]], [[7vdv]], [[7y8r]], [[7zi4]], [[[8ooa]], [8x15]], [[8x19]], [[8x1c]] – hIno80 in nucleosome – Cryo EM<br />
**[[6hts]], [[7vdv]], [[7y8r]], [[7zi4]], [[[8ooa]], [8x15]], [[8x19]], [[8x1c]] – hIno80 in nucleosome – Cryo EM<br />
**[[8ett]], [[8etv]], [[8eu2]], [[8eue]], [[8euj]] – fIno80 in nucleosome – frog - Cryo EM<br />
**[[8ett]], [[8etv]], [[8eu2]], [[8eue]], [[8euj]] – fIno80 in nucleosome – frog - Cryo EM<br />
Line 582: Line 463:
**[[8a5d]], [[8a5p]], [[8a5q]], [[8atf]] – CtIno80 in nucleosome – Cryo EM<br />
**[[8a5d]], [[8a5p]], [[8a5q]], [[8atf]] – CtIno80 in nucleosome – Cryo EM<br />
**[[6fml]], [[8atf]], [[8av6]], [[8oo7]], [[8oo9]], [[8ooc]], [[8oof]], [[8oop]], [[8oor]], [[8oos]], [[8oot]] – TtIno80 + DNA – Cryo EM<br />
**[[6fml]], [[8atf]], [[8av6]], [[8oo7]], [[8oo9]], [[8ooc]], [[8oof]], [[8oop]], [[8oor]], [[8oos]], [[8oot]] – TtIno80 + DNA – Cryo EM<br />
*'''ATPase synthesizing ATP or ATP synthase'''
*'''ATPase synthesizing ATP or ATP synthase'''
*V-ATPS subunit A
*V-ATPS subunit A
**[[3i4l]], [[7qss]], [[7qst]] - PhATPS subunit A <br />
**[[3i4l]], [[7qss]], [[7qst]] - PhATPS subunit A <br />
**[[3mfy]], [[3m4y]], [[3nd8]], [[3nd9]], [[3p20]], [[3qg1]], [[3qia]], [[3qjy]], [[3sdz]], [[3se0]], [[5x09]] - PhATPS subunit A (mutant)
**[[3mfy]], [[3m4y]], [[3nd8]], [[3nd9]], [[3p20]], [[3qg1]], [[3qia]], [[3qjy]], [[3sdz]], [[3se0]], [[5x09]] - PhATPS subunit A (mutant)
Line 594: Line 472:
**[[5bn3]] – NeATPS + NEQ263 + ADP  <br />
**[[5bn3]] – NeATPS + NEQ263 + ADP  <br />
**[[5bo5]] – NeATPS subunit NeqB  <br />
**[[5bo5]] – NeATPS subunit NeqB  <br />
*V-ATPS subunit B
*V-ATPS subunit B
**[[2rkw]], [[3b2q]], [[3ssa]], [[3tgw]], [[3tiv]] - MmATPS subunit B (mutant) <br />
**[[2rkw]], [[3b2q]], [[3ssa]], [[3tgw]], [[3tiv]] - MmATPS subunit B (mutant) <br />
**[[3dsr]] - MmATPS subunit B+ADP<br />
**[[3dsr]] - MmATPS subunit B+ADP<br />
**[[3eiu]] - MmATPS subunit B+ATP<br />
**[[3eiu]] - MmATPS subunit B+ATP<br />
*V-ATPS subunit C
*V-ATPS subunit C
**[[3v3c]] – ATPS subunit C – pea<br />
**[[3v3c]] – ATPS subunit C – pea<br />
**[[4mjn]] - F1-ATPS - wheat<br />
**[[4mjn]] - F1-ATPS - wheat<br />
Line 614: Line 488:
**[[7wem]] – BaF1-ATPS subunit C - NMR<br />
**[[7wem]] – BaF1-ATPS subunit C - NMR<br />
**[[4bem]] - F1F0-ATPS – ''Acetobacterium woodii''<br />
**[[4bem]] - F1F0-ATPS – ''Acetobacterium woodii''<br />
*V-ATPS subunit E
*V-ATPS subunit E
**[[2dm9]], [[2dma]] - PhATPS subunit E <br />
**[[2dm9]], [[2dma]] - PhATPS subunit E <br />
**[[4dt0]] – PhATPS subunit E<br />
**[[4dt0]] – PhATPS subunit E<br />
**[[2kk7]] - MjATPS subunit E N-terminal – NMR<br />
**[[2kk7]] - MjATPS subunit E N-terminal – NMR<br />
*V-ATPS subunit F
*V-ATPS subunit F
**[[2ov6]] - MmATPS subunit F - NMR<br />
**[[2ov6]] - MmATPS subunit F - NMR<br />
**[[2d00]] - TtATPS subunit F<br />
**[[2d00]] - TtATPS subunit F<br />
**[[2qai]] - PfATPS subunit F <br />
**[[2qai]] - PfATPS subunit F <br />
**[[2i4r]] - AfATPS subunit F <br />
**[[2i4r]] - AfATPS subunit F <br />


*F1F0 ATPS α subunit
*F1F0 ATPS α subunit
**[[2r9v]] - F1-ATPS – ''Thermotoga maritima''<br />
**[[2r9v]] - F1-ATPS – ''Thermotoga maritima''<br />
*F1F0 ATPS β subunit
*F1F0 ATPS β subunit
**[[1pyv]] - F1-ATPS – NMR – tobacco<br />
**[[1pyv]] - F1-ATPS – NMR – tobacco<br />
**[[1b9u]] – EcF1-ATPS membrane domain – NMR<br />
**[[1b9u]] – EcF1-ATPS membrane domain – NMR<br />
Line 640: Line 506:
**[[2khk]] - EcF1-ATPS fragment – NMR<br />
**[[2khk]] - EcF1-ATPS fragment – NMR<br />
**[[4q4l]] - F1-ATPS – ''Burkholderia thailandensis''<br />
**[[4q4l]] - F1-ATPS – ''Burkholderia thailandensis''<br />
*F1F0 ATPS γ subunit
*F1F0 ATPS γ subunit
**[[1wu0]] – BaATPS – NMR<br />
**[[1wu0]] – BaATPS – NMR<br />
**[[1a91]], [[1c0v]], [[1aty]], [[1c99]] – EcF1-ATPS – NMR<br />
**[[1a91]], [[1c0v]], [[1aty]], [[1c99]] – EcF1-ATPS – NMR<br />
Line 650: Line 514:
**[[2x2v]], [[4cbk]], [[4cbj]] – BpF0-ATPS – ''Bacillus pseudofirmus''<br />
**[[2x2v]], [[4cbk]], [[4cbj]] – BpF0-ATPS – ''Bacillus pseudofirmus''<br />
**[[3zo6]] – BpF0-ATPS (mutant)<br />
**[[3zo6]] – BpF0-ATPS (mutant)<br />
*F1F0 ATPS δ subunit
*F1F0 ATPS δ subunit
**[[1abv]] – EcF1-ATPS N terminal – NMR<br />
**[[1abv]] – EcF1-ATPS N terminal – NMR<br />
*F1F0 ATPS ε subunit
*F1F0 ATPS ε subunit
**[[1aqt]] – EcF1-ATPS (mutant) <br />
**[[1aqt]] – EcF1-ATPS (mutant) <br />
**[[1bsh]], [[1bsn]] – EcF1-ATPS – NMR<br />
**[[1bsh]], [[1bsn]] – EcF1-ATPS – NMR<br />
Line 664: Line 524:
**[[7vil]], [[7xkz]] – F1-ATPS – ''Mycobacterium abscessus'' - NMR<BR />
**[[7vil]], [[7xkz]] – F1-ATPS – ''Mycobacterium abscessus'' - NMR<BR />
**[[5yio]] – MtF1-ATPS+GDP – ''Mycobacterium tuberculosis'' - NMR<br />
**[[5yio]] – MtF1-ATPS+GDP – ''Mycobacterium tuberculosis'' - NMR<br />
*F1F0 ATPS α,b subunits
*F1F0 ATPS α,b subunits
**[[8spv]] – BaF1-ATPS – Cryo EM<br />
**[[8spv]] – BaF1-ATPS – Cryo EM<br />
**[[8spx]] – BaF1-ATPS + ATP – Cryo EM<br />
**[[8spx]] – BaF1-ATPS + ATP – Cryo EM<br />
**[[8spw]] – BaF1-ATPS + ATP + ADP – Cryo EM<br />
**[[8spw]] – BaF1-ATPS + ATP + ADP – Cryo EM<br />
*F1F0 ATPS α,γ subunits
*F1F0 ATPS α,γ subunits
**[[1c17]] – EcF1-ATPS – NMR<br />
**[[1c17]] – EcF1-ATPS – NMR<br />
**[[8j58]], [[8jr1]] – MtF1-ATPS – Cryo EM<br />
**[[8j58]], [[8jr1]] – MtF1-ATPS – Cryo EM<br />
**[[8j57]] – MtF1-ATPS + drug – Cryo EM<br />
**[[8j57]] – MtF1-ATPS + drug – Cryo EM<br />
*F1F0 ATPS β,δ subunits
*F1F0 ATPS β,δ subunits
**[[8h9g]], [[8h9n]] – hF1-ATPS + ATPS coupling factor – Cryo EM<br />
**[[8h9g]], [[8h9n]] – hF1-ATPS + ATPS coupling factor – Cryo EM<br />
**[[2cly]] – bF1-ATPS + ATPS coupling factor<br />
**[[2cly]] – bF1-ATPS + ATPS coupling factor<br />
*F1F0 ATPS γ,ε subunits
*F1F0 ATPS γ,ε subunits
**[[1fs0]] – EcF1-ATPS<br />
**[[1fs0]] – EcF1-ATPS<br />
*F1F0 ATPS α,β,γ,δ subunits
*F1F0 ATPS α,β,γ,δ subunits
**[[1qo1]]- yF1-ATPS + protein 9<br />
**[[1qo1]]- yF1-ATPS + protein 9<br />
*F1F0 ATPS α,β,γ subunits
*F1F0 ATPS α,β,γ subunits
**[[9avj]] - BaF1-ATPS + ANP – Cryo EM<br />
**[[9avj]] - BaF1-ATPS + ANP – Cryo EM<br />
**[[8u1h]] - BaF1-ATPS (mutant) + ANP + ADP – Cryo EM<br />
**[[8u1h]] - BaF1-ATPS (mutant) + ANP + ADP – Cryo EM<br />
*ATPS multi subunits
*ATPS multi subunits
**[[8h9e]], [[8h9f]], [[8h9i]], [[8h9k]], [[8h9m]], [[8h9p]], [[8h9q]], [[8h9r]], [[8h9s]], [[8h9t]], [[8h9v]] – hATPS – Cryo EM <br />
**[[8h9e]], [[8h9f]], [[8h9i]], [[8h9k]], [[8h9m]], [[8h9p]], [[8h9q]], [[8h9r]], [[8h9s]], [[8h9t]], [[8h9v]] – hATPS – Cryo EM <br />
**[[8khf]], [[8ki3]] – hATPS + drug – Cryo EM <br />
**[[8khf]], [[8ki3]] – hATPS + drug – Cryo EM <br />

Latest revision as of 09:41, 29 March 2026

3D Structures of ATPase

ATPase 3D structures

Updated on 29-March-2026

Proteopedia Page Contributors and Editors (what is this?)

Michal Harel, Joel L. Sussman, Openfox

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